RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 SERPINA12Q8IW75 414 aa12.76□□□□□ -0.37
SYNE3-201ENST00000334258 SLC44A3Q8N4M1 653 aa12.76□□□□□ -0.37
SYNE3-201ENST00000334258 OR51Q1Q8NH59 317 aa12.76□□□□□ -0.37
SYNE3-201ENST00000334258 SLC41A3Q96GZ6 507 aa12.76□□□□□ -0.37
SYNE3-201ENST00000334258 IFT27Q9BW83 186 aa12.76□□□□□ -0.37
SYNE3-201ENST00000334258 HCAR1Q9BXC0 346 aa12.76□□□□□ -0.37
SYNE3-201ENST00000334258 IFT46Q9NQC8 304 aa12.76□□□□□ -0.37
SYNE3-201ENST00000334258 HRH3Q9Y5N1 445 aa12.76□□□□□ -0.37
SYNE3-201ENST00000334258 RNF215Q9Y6U7 377 aa12.76□□□□□ -0.37
SYNE3-201ENST00000334258 CARNS1A5YM72 827 aa12.75□□□□□ -0.37
SYNE3-201ENST00000334258 KRBOX1C9JBD0 128 aa12.75□□□□□ -0.37
SYNE3-201ENST00000334258 PDCD5O14737 125 aa12.75□□□□□ -0.37
SYNE3-201ENST00000334258 KIAA0355O15063 1070 aa12.75□□□□□ -0.37
SYNE3-201ENST00000334258 YKT6O15498 198 aa12.75□□□□□ -0.37
SYNE3-201ENST00000334258 CTSAP10619 480 aa12.75□□□□□ -0.37
SYNE3-201ENST00000334258 CXCL2P19875 107 aa12.75□□□□□ -0.37
SYNE3-201ENST00000334258 OC90Q02509 493 aaPredicted RBP12.75□□□□□ -0.37
SYNE3-201ENST00000334258 FUT5Q11128 374 aa12.75□□□□□ -0.37
SYNE3-201ENST00000334258 RAB33AQ14088 237 aa12.75□□□□□ -0.37
SYNE3-201ENST00000334258 C21orf62-AS1Q17RA5 79 aa12.75□□□□□ -0.37
SYNE3-201ENST00000334258 NHLRC3Q5JS37 347 aa12.75□□□□□ -0.37
SYNE3-201ENST00000334258 METTL11BQ5VVY1 283 aa12.75□□□□□ -0.37
SYNE3-201ENST00000334258 FAM46CQ5VWP2 391 aa12.75□□□□□ -0.37
SYNE3-201ENST00000334258 TPGS2Q68CL5 300 aa12.75□□□□□ -0.37
SYNE3-201ENST00000334258 FBXO46Q6PJ61 603 aaPredicted RBP12.75□□□□□ -0.37
SYNE3-201ENST00000334258 HTR3DQ70Z44 454 aa12.75□□□□□ -0.37
SYNE3-201ENST00000334258 CYB561A3Q8NBI2 242 aa12.75□□□□□ -0.37
SYNE3-201ENST00000334258 C7orf50Q9BRJ6 194 aaKnown RBP12.75□□□□□ -0.37
SYNE3-201ENST00000334258 SLC7A7Q9UM01 511 aa12.75□□□□□ -0.37
SYNE3-201ENST00000334258 PLXNB3Q9ULL4 1909 aa12.75□□□□□ -0.37
SYNE3-201ENST00000334258 A0A0G2JK05 382 aa12.75□□□□□ -0.37
SYNE3-201ENST00000334258 PRSS44E7EML9 344 aa12.75□□□□□ -0.37
SYNE3-201ENST00000334258 K7ESM1 405 aa12.75□□□□□ -0.37
SYNE3-201ENST00000334258 MAGEB4O15481 346 aaPredicted RBP12.75□□□□□ -0.37
SYNE3-201ENST00000334258 LAG3P18627 525 aa12.75□□□□□ -0.37
SYNE3-201ENST00000334258 RAD52P43351 418 aa12.75□□□□□ -0.37
SYNE3-201ENST00000334258 TEAD2Q15562 447 aa12.75□□□□□ -0.37
SYNE3-201ENST00000334258 NIPAL3Q6P499 406 aa12.75□□□□□ -0.37
SYNE3-201ENST00000334258 ZNF433Q8N7K0 673 aaPredicted RBP12.75□□□□□ -0.37
SYNE3-201ENST00000334258 ARL6Q9H0F7 186 aa12.75□□□□□ -0.37
SYNE3-201ENST00000334258 OR52D1Q9H346 318 aa12.75□□□□□ -0.37
SYNE3-201ENST00000334258 FBXL2Q9UKC9 423 aa12.75□□□□□ -0.37
SYNE3-201ENST00000334258 CAMK2AQ9UQM7 478 aa12.75□□□□□ -0.37
SYNE3-201ENST00000334258 FXYD6-FXYD2A0A087WZ82 144 aa12.75□□□□□ -0.37
SYNE3-201ENST00000334258 MFSD2BA6NFX1 497 aa12.75□□□□□ -0.37
SYNE3-201ENST00000334258 H0YC42 278 aa12.75□□□□□ -0.37
SYNE3-201ENST00000334258 GYPBP06028 91 aa12.75□□□□□ -0.37
SYNE3-201ENST00000334258 LPLP06858 475 aa12.75□□□□□ -0.37
SYNE3-201ENST00000334258 CAPZA2P47755 286 aa12.75□□□□□ -0.37
SYNE3-201ENST00000334258 APOOLQ6UXV4 268 aa12.75□□□□□ -0.37
SYNE3-201ENST00000334258 GDF7Q7Z4P5 450 aa12.75□□□□□ -0.37
SYNE3-201ENST00000334258 AHCYL2Q96HN2 611 aaKnown RBP12.75□□□□□ -0.37
SYNE3-201ENST00000334258 TINAGL1Q9GZM7 467 aaPredicted RBP12.75□□□□□ -0.37
SYNE3-201ENST00000334258 SHARPINQ9H0F6 387 aa12.75□□□□□ -0.37
SYNE3-201ENST00000334258 FXYD6Q9H0Q3 95 aa12.75□□□□□ -0.37
SYNE3-201ENST00000334258 ACSL5Q9ULC5 683 aa12.75□□□□□ -0.37
SYNE3-201ENST00000334258 COPS3Q9UNS2 423 aa12.75□□□□□ -0.37
SYNE3-201ENST00000334258 ENTPD4Q9Y227 616 aa12.75□□□□□ -0.37
SYNE3-201ENST00000334258 NPFFR2Q9Y5X5 522 aa12.75□□□□□ -0.37
SYNE3-201ENST00000334258 SLC22A23A1A5C7 686 aa12.74□□□□□ -0.37
SYNE3-201ENST00000334258 CDHR4A6H8M9 788 aa12.74□□□□□ -0.37
SYNE3-201ENST00000334258 FAM86C2PA6NEL3 165 aa12.74□□□□□ -0.37
SYNE3-201ENST00000334258 LEFTY2O00292 366 aa12.74□□□□□ -0.37
SYNE3-201ENST00000334258 FCMRO60667 390 aa12.74□□□□□ -0.37
SYNE3-201ENST00000334258 NOS3P29474 1203 aa12.74□□□□□ -0.37
SYNE3-201ENST00000334258 ARHGDIBP52566 201 aa12.74□□□□□ -0.37
SYNE3-201ENST00000334258 KLF9Q13886 244 aaPredicted RBP12.74□□□□□ -0.37
SYNE3-201ENST00000334258 OR5M10Q6IEU7 315 aa12.74□□□□□ -0.37
SYNE3-201ENST00000334258 FAAP20Q6NZ36 180 aa12.74□□□□□ -0.37
SYNE3-201ENST00000334258 LCTLQ6UWM7 567 aa12.74□□□□□ -0.37
SYNE3-201ENST00000334258 C17orf107Q6ZR85 190 aa12.74□□□□□ -0.37
SYNE3-201ENST00000334258 GRASPQ7Z6J2 395 aaPredicted RBP12.74□□□□□ -0.37
SYNE3-201ENST00000334258 OR11G2Q8NGC1 345 aa12.74□□□□□ -0.37
SYNE3-201ENST00000334258 LGALS14Q8TCE9 139 aa12.74□□□□□ -0.37
SYNE3-201ENST00000334258 TFGQ92734 400 aaPredicted RBP12.74□□□□□ -0.37
SYNE3-201ENST00000334258 NANSQ9NR45 359 aa12.74□□□□□ -0.37
SYNE3-201ENST00000334258 EMC3Q9P0I2 261 aa12.74□□□□□ -0.37
SYNE3-201ENST00000334258 IRAK3Q9Y616 596 aa12.74□□□□□ -0.37
SYNE3-201ENST00000334258 PLXND1Q9Y4D7 1925 aa12.74□□□□□ -0.37
SYNE3-201ENST00000334258 G3V3Q6 166 aa12.74□□□□□ -0.37
SYNE3-201ENST00000334258 SSX5O60225 188 aa12.74□□□□□ -0.37
SYNE3-201ENST00000334258 PTP4A3O75365 173 aa12.74□□□□□ -0.37
SYNE3-201ENST00000334258 CCR9P51686 369 aa12.74□□□□□ -0.37
SYNE3-201ENST00000334258 TRAM1Q15629 374 aa12.74□□□□□ -0.37
SYNE3-201ENST00000334258 MBOAT2Q6ZWT7 520 aa12.74□□□□□ -0.37
SYNE3-201ENST00000334258 STPG2Q8N412 459 aa12.74□□□□□ -0.37
SYNE3-201ENST00000334258 OR52H1Q8NGJ2 320 aa12.74□□□□□ -0.37
SYNE3-201ENST00000334258 GINS4Q9BRT9 223 aa12.74□□□□□ -0.37
SYNE3-201ENST00000334258 PITHD1Q9GZP4 211 aaPredicted RBP12.74□□□□□ -0.37
SYNE3-201ENST00000334258 NOX3Q9HBY0 568 aa12.74□□□□□ -0.37
SYNE3-201ENST00000334258 HRASLSQ9HDD0 168 aa12.74□□□□□ -0.37
SYNE3-201ENST00000334258 KRCC1Q9NPI7 259 aaPredicted RBP12.74□□□□□ -0.37
SYNE3-201ENST00000334258 LHX9Q9NQ69 397 aa12.74□□□□□ -0.37
SYNE3-201ENST00000334258 CA10Q9NS85 328 aa12.74□□□□□ -0.37
SYNE3-201ENST00000334258 WNT6Q9Y6F9 365 aa12.74□□□□□ -0.37
SYNE3-201ENST00000334258 WDFY4Q6ZS81 3184 aa12.74□□□□□ -0.37
SYNE3-201ENST00000334258 PLPP2O43688 288 aa12.73□□□□□ -0.37
SYNE3-201ENST00000334258 RP2O75695 350 aa12.73□□□□□ -0.37
SYNE3-201ENST00000334258 NMBP08949 121 aa12.73□□□□□ -0.37
SYNE3-201ENST00000334258 CLUP10909 449 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms