RNA–Protein interactions for RNA: ENST00000330843.8

RAB11FIP1-202, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene RAB11FIP1, Length 7,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-202ENST00000330843 ZNF160Q9HCG1 818 aa12.02□□□□□ -0.49
RAB11FIP1-202ENST00000330843 POLMQ9NP87 494 aaPredicted RBP12.02□□□□□ -0.49
RAB11FIP1-202ENST00000330843 TRAF3IP2O43734 574 aaPredicted RBP12.02□□□□□ -0.49
RAB11FIP1-202ENST00000330843 JRKO75564 520 aa12.02□□□□□ -0.49
RAB11FIP1-202ENST00000330843 HLA-HP01893 362 aa12.02□□□□□ -0.49
RAB11FIP1-202ENST00000330843 ADH5P11766 374 aa12.02□□□□□ -0.49
RAB11FIP1-202ENST00000330843 CTRB1P17538 263 aa12.02□□□□□ -0.49
RAB11FIP1-202ENST00000330843 XCR1P46094 333 aa12.02□□□□□ -0.49
RAB11FIP1-202ENST00000330843 CTRB2Q6GPI1 263 aa12.02□□□□□ -0.49
RAB11FIP1-202ENST00000330843 SBSNQ6UWP8 590 aa12.02□□□□□ -0.49
RAB11FIP1-202ENST00000330843 OR6F1Q8NGZ6 308 aa12.02□□□□□ -0.49
RAB11FIP1-202ENST00000330843 ZNF599Q96NL3 588 aa12.02□□□□□ -0.49
RAB11FIP1-202ENST00000330843 CHRDQ9H2X0 955 aa12.02□□□□□ -0.49
RAB11FIP1-202ENST00000330843 ZDHHC4Q9NPG8 344 aa12.02□□□□□ -0.49
RAB11FIP1-202ENST00000330843 DUSP22Q9NRW4 184 aa12.02□□□□□ -0.49
RAB11FIP1-202ENST00000330843 USP31Q70CQ4 1352 aa12.02□□□□□ -0.49
RAB11FIP1-202ENST00000330843 GAPDHSO14556 408 aaPredicted RBP12.02□□□□□ -0.49
RAB11FIP1-202ENST00000330843 SRPX2O60687 465 aaPredicted RBP12.02□□□□□ -0.49
RAB11FIP1-202ENST00000330843 ELNP15502 786 aa12.02□□□□□ -0.49
RAB11FIP1-202ENST00000330843 ARRB1P49407 418 aaPredicted RBP12.02□□□□□ -0.49
RAB11FIP1-202ENST00000330843 LIMK1P53667 647 aa12.02□□□□□ -0.49
RAB11FIP1-202ENST00000330843 TBPL1P62380 186 aa12.02□□□□□ -0.49
RAB11FIP1-202ENST00000330843 METAP1DQ6UB28 335 aaPredicted RBP12.02□□□□□ -0.49
RAB11FIP1-202ENST00000330843 FCRLAQ7L513 359 aa12.02□□□□□ -0.49
RAB11FIP1-202ENST00000330843 NAGSQ8N159 534 aa12.02□□□□□ -0.49
RAB11FIP1-202ENST00000330843 BPIFB2Q8N4F0 458 aa12.02□□□□□ -0.49
RAB11FIP1-202ENST00000330843 TMEM19Q96HH6 336 aa12.02□□□□□ -0.49
RAB11FIP1-202ENST00000330843 DDX31Q9H8H2 851 aaKnown RBP12.02□□□□□ -0.49
RAB11FIP1-202ENST00000330843 V9GY05 133 aa12.02□□□□□ -0.49
RAB11FIP1-202ENST00000330843 FAM183AA6NL82 134 aa12.02□□□□□ -0.49
RAB11FIP1-202ENST00000330843 GLAP06280 429 aa12.02□□□□□ -0.49
RAB11FIP1-202ENST00000330843 PGCP20142 388 aa12.02□□□□□ -0.49
RAB11FIP1-202ENST00000330843 AHRP35869 848 aa12.02□□□□□ -0.49
RAB11FIP1-202ENST00000330843 PLCXD2Q0VAA5 305 aa12.02□□□□□ -0.49
RAB11FIP1-202ENST00000330843 DUSP7Q16829 419 aa12.02□□□□□ -0.49
RAB11FIP1-202ENST00000330843 TMEM268Q5VZI3 342 aa12.02□□□□□ -0.49
RAB11FIP1-202ENST00000330843 RDH10Q8IZV5 341 aa12.02□□□□□ -0.49
RAB11FIP1-202ENST00000330843 OR2M2Q96R28 347 aa12.02□□□□□ -0.49
RAB11FIP1-202ENST00000330843 SLC39A9Q9NUM3 307 aa12.02□□□□□ -0.49
RAB11FIP1-202ENST00000330843 GMEB2Q9UKD1 530 aa12.02□□□□□ -0.49
RAB11FIP1-202ENST00000330843 SYN3O14994 580 aa12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 HNRNPA2B1P22626 353 aaKnown RBP12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 SH3BP2P78314 561 aa12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 FOXK1P85037 733 aa12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 DEFB134Q4QY38 66 aa12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 IL34Q6ZMJ4 242 aa12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 CRLF2Q9HC73 371 aa12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 CPNE7Q9UBL6 633 aa12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 COQ4Q9Y3A0 265 aa12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 DLG5Q8TDM6 1919 aa12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 CTDSP2O14595 271 aa12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 SFTPDP35247 375 aa12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 RAP2BP61225 183 aa12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 SMAD2Q15796 467 aaKnown RBP12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 C11orf42Q8N5U0 333 aa12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 OR2T4Q8NH00 348 aa12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 DYRK2Q92630 601 aa12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 SGK3Q96BR1 496 aa12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 NAA11Q9BSU3 229 aaPredicted RBP12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 BCO1Q9HAY6 547 aa12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 SLC35D1Q9NTN3 355 aa12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 NPAP1Q9NZP6 1156 aa12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 SLC23A2Q9UGH3 650 aa12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 VSTM2BA6NLU5 285 aa12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 ZNF701M0R085 212 aaPredicted RBP12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 FAM163BP0C2L3 166 aa12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 C21orf33P30042 268 aaPredicted RBP12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 TCTE1Q5JU00 501 aa12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 ANGPTL6Q8NI99 470 aa12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 KCNJ9Q92806 393 aa12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 SLC35B4Q969S0 331 aa12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 ECHDC3Q96DC8 303 aa12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 SCPEP1Q9HB40 452 aa12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 MTCH1Q9NZJ7 389 aa12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 PHYHO14832 338 aa12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 RBMS1P29558 406 aaKnown RBP12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 LSMEM2Q8N112 164 aa12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 OR4F15Q8NGB8 312 aa12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 HIDE1A8MVS5 230 aa12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 RANP62826 216 aaKnown RBP12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 MEF2DQ14814 521 aa12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 ZNF691Q5VV52 312 aa12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 DHRS11Q6UWP2 260 aa12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 GLB1L2Q8IW92 636 aa12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 CMTM8Q8IZV2 173 aa12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 COMMD1Q8N668 190 aa12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 L3MBTL4Q8NA19 623 aa12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 SPTSSAQ969W0 71 aa12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 HRASLS2Q9NWW9 162 aa12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 KLHL42Q9P2K6 505 aa12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 TNS2Q63HR2 1409 aa12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 PIM1P11309 404 aaPredicted RBP12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 NDUFS1P28331 727 aa12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 SOX9P48436 509 aa12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 SLC11A1P49279 550 aa12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 CCR6P51684 374 aa12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 ZNF239Q16600 458 aaKnown RBP12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 BRAT1Q6PJG6 821 aa12.01□□□□□ -0.49
RAB11FIP1-202ENST00000330843 NPAS4Q8IUM7 802 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms