RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 SH2B3Q9UQQ2 575 aa10.64□□□□□ -0.71
COL4A5-201ENST00000328300 ALG5Q9Y673 324 aa10.64□□□□□ -0.71
COL4A5-201ENST00000328300 INMT-MINDY4F8WBC2 141 aa10.64□□□□□ -0.71
COL4A5-201ENST00000328300 KLRC4-KLRK1H3BQV0 150 aa10.64□□□□□ -0.71
COL4A5-201ENST00000328300 MAP2K3P46734 347 aa10.64□□□□□ -0.71
COL4A5-201ENST00000328300 TEKQ02763 1124 aa10.64□□□□□ -0.71
COL4A5-201ENST00000328300 SLC35D3Q5M8T2 416 aa10.64□□□□□ -0.71
COL4A5-201ENST00000328300 C22orf42Q6IC83 251 aa10.64□□□□□ -0.71
COL4A5-201ENST00000328300 RPL22L1Q6P5R6 122 aaKnown RBP10.64□□□□□ -0.71
COL4A5-201ENST00000328300 SLC35F3Q8IY50 421 aa10.64□□□□□ -0.71
COL4A5-201ENST00000328300 SYT14Q8NB59 555 aa10.64□□□□□ -0.71
COL4A5-201ENST00000328300 OR8S1Q8NH09 359 aa10.64□□□□□ -0.71
COL4A5-201ENST00000328300 ATOH1Q92858 354 aaPredicted RBP10.64□□□□□ -0.71
COL4A5-201ENST00000328300 GLIPR2Q9H4G4 154 aa10.64□□□□□ -0.71
COL4A5-201ENST00000328300 ZNF160Q9HCG1 818 aa10.64□□□□□ -0.71
COL4A5-201ENST00000328300 GCH1P30793 250 aa10.64□□□□□ -0.71
COL4A5-201ENST00000328300 SLC26A5P58743 744 aa10.64□□□□□ -0.71
COL4A5-201ENST00000328300 FGL1Q08830 312 aa10.64□□□□□ -0.71
COL4A5-201ENST00000328300 ILKQ13418 452 aa10.64□□□□□ -0.71
COL4A5-201ENST00000328300 TRA2AQ13595 282 aaKnown RBP eCLIP10.64□□□□□ -0.71
COL4A5-201ENST00000328300 PTPRRQ15256 657 aa10.64□□□□□ -0.71
COL4A5-201ENST00000328300 SAXO2Q658L1 398 aa10.64□□□□□ -0.71
COL4A5-201ENST00000328300 GALNT6Q8NCL4 622 aa10.64□□□□□ -0.71
COL4A5-201ENST00000328300 SLC2A12Q8TD20 617 aa10.64□□□□□ -0.71
COL4A5-201ENST00000328300 ADAMTS14Q8WXS8 1223 aa10.64□□□□□ -0.71
COL4A5-201ENST00000328300 NELFAQ9H3P2 528 aa10.64□□□□□ -0.71
COL4A5-201ENST00000328300 RDH8Q9NYR8 311 aa10.64□□□□□ -0.71
COL4A5-201ENST00000328300 DAPP1Q9UN19 280 aa10.64□□□□□ -0.71
COL4A5-201ENST00000328300 A0A087WV62 115 aa10.64□□□□□ -0.71
COL4A5-201ENST00000328300 S100A2P29034 98 aa10.64□□□□□ -0.71
COL4A5-201ENST00000328300 LPAL2Q16609 132 aa10.64□□□□□ -0.71
COL4A5-201ENST00000328300 C3orf33Q6P1S2 294 aa10.64□□□□□ -0.71
COL4A5-201ENST00000328300 PAPD4Q6PIY7 484 aaKnown RBP10.64□□□□□ -0.71
COL4A5-201ENST00000328300 VRK2Q86Y07 508 aa10.64□□□□□ -0.71
COL4A5-201ENST00000328300 KLHL9Q9P2J3 617 aa10.64□□□□□ -0.71
COL4A5-201ENST00000328300 MRPS2Q9Y399 296 aaKnown RBP10.64□□□□□ -0.71
COL4A5-201ENST00000328300 ZSCAN5BA6NJL1 495 aa10.63□□□□□ -0.71
COL4A5-201ENST00000328300 TNFSF4P23510 183 aa10.63□□□□□ -0.71
COL4A5-201ENST00000328300 RIN1Q13671 783 aa10.63□□□□□ -0.71
COL4A5-201ENST00000328300 PRRX2Q99811 253 aa10.63□□□□□ -0.71
COL4A5-201ENST00000328300 WACQ9BTA9 647 aa10.63□□□□□ -0.71
COL4A5-201ENST00000328300 NUDT15Q9NV35 164 aa10.63□□□□□ -0.71
COL4A5-201ENST00000328300 HHLA2Q9UM44 414 aa10.63□□□□□ -0.71
COL4A5-201ENST00000328300 C2CD4DB7Z1M9 353 aa10.63□□□□□ -0.71
COL4A5-201ENST00000328300 MAOBP27338 520 aa10.63□□□□□ -0.71
COL4A5-201ENST00000328300 C3orf38Q5JPI3 329 aa10.63□□□□□ -0.71
COL4A5-201ENST00000328300 C9orf50Q5SZB4 431 aa10.63□□□□□ -0.71
COL4A5-201ENST00000328300 C6orf15Q6UXA7 325 aaPredicted RBP10.63□□□□□ -0.71
COL4A5-201ENST00000328300 KIAA0907Q7Z7F0 614 aaPredicted RBP10.63□□□□□ -0.71
COL4A5-201ENST00000328300 GALNT10Q86SR1 603 aa10.63□□□□□ -0.71
COL4A5-201ENST00000328300 RETREG3Q86VR2 466 aa10.63□□□□□ -0.71
COL4A5-201ENST00000328300 CCDC28AQ8IWP9 274 aa10.63□□□□□ -0.71
COL4A5-201ENST00000328300 GAL3ST1Q99999 423 aa10.63□□□□□ -0.71
COL4A5-201ENST00000328300 RBM24Q9BX46 236 aaKnown RBP10.63□□□□□ -0.71
COL4A5-201ENST00000328300 CXorf36Q9H7Y0 433 aa10.63□□□□□ -0.71
COL4A5-201ENST00000328300 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.63□□□□□ -0.71
COL4A5-201ENST00000328300 UTS2O95399 124 aa10.63□□□□□ -0.71
COL4A5-201ENST00000328300 GTF2F2P13984 249 aa10.63□□□□□ -0.71
COL4A5-201ENST00000328300 TACR1P25103 407 aa10.63□□□□□ -0.71
COL4A5-201ENST00000328300 CCR2P41597 374 aa10.63□□□□□ -0.71
COL4A5-201ENST00000328300 FAM53BQ14153 422 aa10.63□□□□□ -0.71
COL4A5-201ENST00000328300 TMEM196Q5HYL7 178 aa10.63□□□□□ -0.71
COL4A5-201ENST00000328300 DPY19L2P2Q6ZN68 376 aa10.63□□□□□ -0.71
COL4A5-201ENST00000328300 PNPLA1Q8N8W4 532 aa10.63□□□□□ -0.71
COL4A5-201ENST00000328300 SP7Q8TDD2 431 aaPredicted RBP10.63□□□□□ -0.71
COL4A5-201ENST00000328300 WBP2Q969T9 261 aa10.63□□□□□ -0.71
COL4A5-201ENST00000328300 GIMAP5Q96F15 307 aa10.63□□□□□ -0.71
COL4A5-201ENST00000328300 OR4K3Q96R72 315 aa10.63□□□□□ -0.71
COL4A5-201ENST00000328300 SLC5A7Q9GZV3 580 aa10.63□□□□□ -0.71
COL4A5-201ENST00000328300 HSPB11Q9Y547 144 aa10.63□□□□□ -0.71
COL4A5-201ENST00000328300 UBFD1O14562 309 aaKnown RBP10.63□□□□□ -0.71
COL4A5-201ENST00000328300 OR1D4P47884 311 aa10.63□□□□□ -0.71
COL4A5-201ENST00000328300 TAS2R31P59538 309 aa10.63□□□□□ -0.71
COL4A5-201ENST00000328300 CHRNEQ04844 493 aa10.63□□□□□ -0.71
COL4A5-201ENST00000328300 MLC1Q15049 377 aa10.63□□□□□ -0.71
COL4A5-201ENST00000328300 CLPPQ16740 277 aaPredicted RBP10.63□□□□□ -0.71
COL4A5-201ENST00000328300 TMEM207Q6UWW9 146 aa10.63□□□□□ -0.71
COL4A5-201ENST00000328300 MRPL21Q7Z2W9 205 aaKnown RBP10.63□□□□□ -0.71
COL4A5-201ENST00000328300 LNX2Q8N448 690 aa10.63□□□□□ -0.71
COL4A5-201ENST00000328300 HCAR1Q9BXC0 346 aa10.63□□□□□ -0.71
COL4A5-201ENST00000328300 KLHL13Q9P2N7 655 aa10.63□□□□□ -0.71
COL4A5-201ENST00000328300 ENPP5Q9UJA9 477 aa10.63□□□□□ -0.71
COL4A5-201ENST00000328300 CDHR4A6H8M9 788 aa10.63□□□□□ -0.71
COL4A5-201ENST00000328300 ANKRD30BLA7E2S9 258 aa10.63□□□□□ -0.71
COL4A5-201ENST00000328300 DSCR3O14972 297 aa10.63□□□□□ -0.71
COL4A5-201ENST00000328300 GLB1P16278 677 aa10.63□□□□□ -0.71
COL4A5-201ENST00000328300 CHMP24386 653 aa10.63□□□□□ -0.71
COL4A5-201ENST00000328300 GIPRP48546 466 aa10.63□□□□□ -0.71
COL4A5-201ENST00000328300 PITPNBP48739 271 aa10.63□□□□□ -0.71
COL4A5-201ENST00000328300 GPR176Q14439 515 aa10.63□□□□□ -0.71
COL4A5-201ENST00000328300 FAM160A2Q8N612 972 aaPredicted RBP10.63□□□□□ -0.71
COL4A5-201ENST00000328300 KCTD12Q96CX2 325 aaKnown RBP10.63□□□□□ -0.71
COL4A5-201ENST00000328300 SYT3Q9BQG1 590 aa10.63□□□□□ -0.71
COL4A5-201ENST00000328300 ICKQ9UPZ9 632 aa10.63□□□□□ -0.71
COL4A5-201ENST00000328300 CLDN24A6NM45 220 aa10.62□□□□□ -0.71
COL4A5-201ENST00000328300 PTTG1O95997 202 aa10.62□□□□□ -0.71
COL4A5-201ENST00000328300 AMY2BP19961 511 aa10.62□□□□□ -0.71
COL4A5-201ENST00000328300 MRPL19P49406 292 aaKnown RBP10.62□□□□□ -0.71
COL4A5-201ENST00000328300 ODF4Q2M2E3 257 aa10.62□□□□□ -0.71
COL4A5-201ENST00000328300 PRR22Q8IZ63 422 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms