RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 TANKQ92844 425 aa15.87■□□□□ 0.13
SMCHD1-201ENST00000320876 HERPUD2Q9BSE4 406 aa15.87■□□□□ 0.13
SMCHD1-201ENST00000320876 C1QTNF2Q9BXJ5 285 aa15.87■□□□□ 0.13
SMCHD1-201ENST00000320876 RICTORQ6R327 1708 aa15.87■□□□□ 0.13
SMCHD1-201ENST00000320876 CEBPZOSA8MTT3 80 aa15.87■□□□□ 0.13
SMCHD1-201ENST00000320876 CPNE6O95741 557 aa15.87■□□□□ 0.13
SMCHD1-201ENST00000320876 CPZQ66K79 652 aa15.87■□□□□ 0.13
SMCHD1-201ENST00000320876 ZNF439Q8NDP4 499 aa15.87■□□□□ 0.13
SMCHD1-201ENST00000320876 OR10K1Q8NGX5 313 aa15.87■□□□□ 0.13
SMCHD1-201ENST00000320876 SMG9Q9H0W8 520 aaKnown RBP15.87■□□□□ 0.13
SMCHD1-201ENST00000320876 HIPK2Q9H2X6 1198 aa15.87■□□□□ 0.13
SMCHD1-201ENST00000320876 CUTCQ9NTM9 273 aa15.87■□□□□ 0.13
SMCHD1-201ENST00000320876 IMPA2O14732 288 aa15.87■□□□□ 0.13
SMCHD1-201ENST00000320876 GABRB3P28472 473 aa15.87■□□□□ 0.13
SMCHD1-201ENST00000320876 COL9A3Q14050 684 aaPredicted RBP15.87■□□□□ 0.13
SMCHD1-201ENST00000320876 CDHR3Q6ZTQ4 885 aa15.87■□□□□ 0.13
SMCHD1-201ENST00000320876 LANCL3Q6ZV70 420 aa15.87■□□□□ 0.13
SMCHD1-201ENST00000320876 LARP4Q71RC2 724 aaKnown RBP eCLIP15.87■□□□□ 0.131e-7■■■□□ 15.8
SMCHD1-201ENST00000320876 OR5B2Q96R09 309 aa15.87■□□□□ 0.13
SMCHD1-201ENST00000320876 ZNF300Q96RE9 604 aaPredicted RBP15.87■□□□□ 0.13
SMCHD1-201ENST00000320876 SERINC2Q96SA4 455 aa15.87■□□□□ 0.13
SMCHD1-201ENST00000320876 NIPAL2Q9H841 368 aa15.87■□□□□ 0.13
SMCHD1-201ENST00000320876 ZNF281Q9Y2X9 895 aa15.87■□□□□ 0.13
SMCHD1-201ENST00000320876 ANKRD30BLA7E2S9 258 aa15.87■□□□□ 0.13
SMCHD1-201ENST00000320876 APOA2P02652 100 aa15.87■□□□□ 0.13
SMCHD1-201ENST00000320876 SHC2P98077 582 aa15.87■□□□□ 0.13
SMCHD1-201ENST00000320876 SOHLH1Q5JUK2 328 aa15.87■□□□□ 0.13
SMCHD1-201ENST00000320876 OR9A2Q8NGT5 310 aa15.87■□□□□ 0.13
SMCHD1-201ENST00000320876 SEMA4GQ9NTN9 838 aa15.87■□□□□ 0.13
SMCHD1-201ENST00000320876 PPT1P50897 306 aa15.86■□□□□ 0.13
SMCHD1-201ENST00000320876 DUSP3P51452 185 aaPredicted RBP15.86■□□□□ 0.13
SMCHD1-201ENST00000320876 RAB35Q15286 201 aa15.86■□□□□ 0.13
SMCHD1-201ENST00000320876 P2RY14Q15391 338 aa15.86■□□□□ 0.13
SMCHD1-201ENST00000320876 PIP5KL1Q5T9C9 394 aa15.86■□□□□ 0.13
SMCHD1-201ENST00000320876 HIST2H3AQ71DI3 136 aa15.86■□□□□ 0.13
SMCHD1-201ENST00000320876 ZNF454Q8N9F8 522 aa15.86■□□□□ 0.13
SMCHD1-201ENST00000320876 ANKRD9Q96BM1 317 aaPredicted RBP15.86■□□□□ 0.13
SMCHD1-201ENST00000320876 SLC2A13Q96QE2 648 aa15.86■□□□□ 0.13
SMCHD1-201ENST00000320876 MEIS3P2A8K0S8 358 aa15.86■□□□□ 0.13
SMCHD1-201ENST00000320876 ZNF623O75123 536 aa15.86■□□□□ 0.13
SMCHD1-201ENST00000320876 HMGCLP35914 325 aa15.86■□□□□ 0.13
SMCHD1-201ENST00000320876 RAB30Q15771 203 aa15.86■□□□□ 0.13
SMCHD1-201ENST00000320876 LY6G5CQ5SRR4 150 aa15.86■□□□□ 0.13
SMCHD1-201ENST00000320876 PLCXD3Q63HM9 321 aa15.86■□□□□ 0.13
SMCHD1-201ENST00000320876 C14orf80Q86SX3 495 aa15.86■□□□□ 0.13
SMCHD1-201ENST00000320876 HHIPL1Q96JK4 782 aa15.86■□□□□ 0.13
SMCHD1-201ENST00000320876 M0R3H8 397 aa15.86■□□□□ 0.13
SMCHD1-201ENST00000320876 FBXO24O75426 580 aa15.86■□□□□ 0.13
SMCHD1-201ENST00000320876 WDR5P61964 334 aaKnown RBP15.86■□□□□ 0.13
SMCHD1-201ENST00000320876 SRYQ05066 204 aa15.86■□□□□ 0.13
SMCHD1-201ENST00000320876 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.86■□□□□ 0.13
SMCHD1-201ENST00000320876 SERPINA12Q8IW75 414 aa15.86■□□□□ 0.13
SMCHD1-201ENST00000320876 RSPRY1Q96DX4 576 aa15.86■□□□□ 0.13
SMCHD1-201ENST00000320876 Q9Y3F1 56 aa15.86■□□□□ 0.13
SMCHD1-201ENST00000320876 PPP1R2P9O14990 202 aa15.86■□□□□ 0.13
SMCHD1-201ENST00000320876 MS4A2Q01362 244 aa15.86■□□□□ 0.13
SMCHD1-201ENST00000320876 PIN1Q13526 163 aaPredicted RBP15.86■□□□□ 0.13
SMCHD1-201ENST00000320876 PLXDC1Q8IUK5 500 aa15.86■□□□□ 0.13
SMCHD1-201ENST00000320876 NRG4Q8WWG1 115 aa15.86■□□□□ 0.13
SMCHD1-201ENST00000320876 DICER1Q9UPY3 1922 aaKnown RBP15.86■□□□□ 0.13
SMCHD1-201ENST00000320876 TMEM212A6NML5 194 aa15.86■□□□□ 0.13
SMCHD1-201ENST00000320876 NFYBP25208 207 aa15.86■□□□□ 0.13
SMCHD1-201ENST00000320876 SERTAD2Q14140 314 aa15.86■□□□□ 0.13
SMCHD1-201ENST00000320876 RNF151Q2KHN1 245 aa15.86■□□□□ 0.13
SMCHD1-201ENST00000320876 LYPD4Q6UWN0 246 aa15.86■□□□□ 0.13
SMCHD1-201ENST00000320876 FBXW12Q6X9E4 464 aa15.86■□□□□ 0.13
SMCHD1-201ENST00000320876 NAGSQ8N159 534 aa15.86■□□□□ 0.13
SMCHD1-201ENST00000320876 TMEM239Q8WW34 195 aa15.86■□□□□ 0.13
SMCHD1-201ENST00000320876 POLHQ9Y253 713 aa15.86■□□□□ 0.13
SMCHD1-201ENST00000320876 RPS18P62269 152 aaKnown RBP15.86■□□□□ 0.13
SMCHD1-201ENST00000320876 DBPQ10586 325 aaPredicted RBP15.86■□□□□ 0.13
SMCHD1-201ENST00000320876 TNK1Q13470 666 aa15.86■□□□□ 0.13
SMCHD1-201ENST00000320876 NADSYN1Q6IA69 706 aa15.86■□□□□ 0.13
SMCHD1-201ENST00000320876 RNF170Q96K19 258 aa15.86■□□□□ 0.13
SMCHD1-201ENST00000320876 KDM4FA0A1W2PPD8 638 aa15.86■□□□□ 0.13
SMCHD1-201ENST00000320876 MC3RP41968 323 aa15.86■□□□□ 0.13
SMCHD1-201ENST00000320876 HSD17B7P56937 341 aa15.86■□□□□ 0.13
SMCHD1-201ENST00000320876 KCNJ8Q15842 424 aa15.86■□□□□ 0.13
SMCHD1-201ENST00000320876 ISCA2Q86U28 154 aa15.86■□□□□ 0.13
SMCHD1-201ENST00000320876 NPRL2Q8WTW4 380 aa15.86■□□□□ 0.13
SMCHD1-201ENST00000320876 OR11A1Q9GZK7 315 aa15.86■□□□□ 0.13
SMCHD1-201ENST00000320876 GABRPO00591 440 aa15.85■□□□□ 0.13
SMCHD1-201ENST00000320876 HBQ1P09105 142 aa15.85■□□□□ 0.13
SMCHD1-201ENST00000320876 CPOXP36551 454 aa15.85■□□□□ 0.13
SMCHD1-201ENST00000320876 SPRYD7Q5W111 196 aa15.85■□□□□ 0.13
SMCHD1-201ENST00000320876 CDRT4Q8N9R6 151 aa15.85■□□□□ 0.13
SMCHD1-201ENST00000320876 TCRBV3S1A0A5B6 114 aa15.85■□□□□ 0.13
SMCHD1-201ENST00000320876 GRM7Q14831 915 aa15.85■□□□□ 0.13
SMCHD1-201ENST00000320876 HEPHL1Q6MZM0 1159 aa15.85■□□□□ 0.13
SMCHD1-201ENST00000320876 LETMD1Q6P1Q0 360 aa15.85■□□□□ 0.13
SMCHD1-201ENST00000320876 OSTM1Q86WC4 334 aa15.85■□□□□ 0.13
SMCHD1-201ENST00000320876 PRR11Q96HE9 360 aaPredicted RBP15.85■□□□□ 0.13
SMCHD1-201ENST00000320876 M6PRP20645 277 aa15.85■□□□□ 0.13
SMCHD1-201ENST00000320876 SPCS2Q15005 226 aa15.85■□□□□ 0.13
SMCHD1-201ENST00000320876 PIWIL3Q7Z3Z3 882 aaKnown RBP15.85■□□□□ 0.13
SMCHD1-201ENST00000320876 HORMAD2Q8N7B1 307 aa15.85■□□□□ 0.13
SMCHD1-201ENST00000320876 IL1F10Q8WWZ1 152 aa15.85■□□□□ 0.13
SMCHD1-201ENST00000320876 MOCOSQ96EN8 888 aa15.85■□□□□ 0.13
SMCHD1-201ENST00000320876 USB1Q9BQ65 265 aaKnown RBP15.85■□□□□ 0.13
SMCHD1-201ENST00000320876 BLACEA4D250 179 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms