RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 LGR4Q9BXB1 951 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 OR52D1Q9H346 318 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 METTL8Q9H825 291 aaKnown RBP7.03□□□□□ -1.28
CDHR3-201ENST00000317716 TMEM45AQ9NWC5 275 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 MBD1Q9UIS9 605 aaPredicted RBP7.03□□□□□ -1.28
CDHR3-201ENST00000317716 YBX2Q9Y2T7 364 aaKnown RBP7.03□□□□□ -1.28
CDHR3-201ENST00000317716 CABIN1Q9Y6J0 2220 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 MN1Q10571 1320 aaPredicted RBP7.03□□□□□ -1.28
CDHR3-201ENST00000317716 A0A087WUU8 490 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 A0A0B4J293 547 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 CDHR4A6H8M9 788 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 TVP23AA6NH52 213 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 UNC119BA6NIH7 251 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 SSX5O60225 188 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 KLK8O60259 260 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 RCBTB2O95199 551 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 TPOP07202 933 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 FURINP09958 794 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 S100A11P31949 105 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 PPM1AP35813 382 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 LSSP48449 732 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 PRKXP51817 358 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 WNT3P56703 355 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 PGGHGQ32M88 737 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 C3orf38Q5JPI3 329 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 MPP7Q5T2T1 576 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 HBMQ6B0K9 141 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 TMEM65Q6PI78 240 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 MSANTD1Q6ZTZ1 278 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 ZNF761Q86XN6 746 aaPredicted RBP7.03□□□□□ -1.28
CDHR3-201ENST00000317716 TDHQ8IZJ6 230 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 OR5M3Q8NGP4 307 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 TMEM255BQ8WV15 326 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 ADAMTS14Q8WXS8 1223 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 NSMAFQ92636 917 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 SAMD11Q96NU1 681 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 DERL3Q96Q80 235 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 ABHD1Q96SE0 405 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 CLSTN3Q9BQT9 956 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 C1QTNF3Q9BXJ4 246 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 POLDIP3Q9BY77 421 aaKnown RBP7.03□□□□□ -1.28
CDHR3-201ENST00000317716 ZNF576Q9H609 170 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 HINT3Q9NQE9 182 aaKnown RBP7.03□□□□□ -1.28
CDHR3-201ENST00000317716 CENPMQ9NSP4 180 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 LYARQ9NX58 379 aaKnown RBP7.03□□□□□ -1.28
CDHR3-201ENST00000317716 PCDHGA9Q9Y5G4 932 aaKnown RBP7.03□□□□□ -1.28
CDHR3-201ENST00000317716 XIRP2A4UGR9 3374 aa7.02□□□□□ -1.28
CDHR3-201ENST00000317716 KRBOX1C9JBD0 128 aa7.02□□□□□ -1.29
CDHR3-201ENST00000317716 SC5DO75845 299 aa7.02□□□□□ -1.29
CDHR3-201ENST00000317716 DCNP07585 359 aaKnown RBP7.02□□□□□ -1.29
CDHR3-201ENST00000317716 SFTPBP07988 381 aa7.02□□□□□ -1.29
CDHR3-201ENST00000317716 CLUP10909 449 aa7.02□□□□□ -1.29
CDHR3-201ENST00000317716 GLULP15104 373 aa7.02□□□□□ -1.29
CDHR3-201ENST00000317716 UGT2B7P16662 529 aa7.02□□□□□ -1.29
CDHR3-201ENST00000317716 CD22P20273 847 aa7.02□□□□□ -1.29
CDHR3-201ENST00000317716 DLSTP36957 453 aa7.02□□□□□ -1.29
CDHR3-201ENST00000317716 MAP3K8P41279 467 aa7.02□□□□□ -1.29
CDHR3-201ENST00000317716 DNASE1L1P49184 302 aa7.02□□□□□ -1.29
CDHR3-201ENST00000317716 SELENOPP49908 381 aa7.02□□□□□ -1.29
CDHR3-201ENST00000317716 SGCGQ13326 291 aa7.02□□□□□ -1.29
CDHR3-201ENST00000317716 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.02□□□□□ -1.29
CDHR3-201ENST00000317716 MINDY4Q4G0A6 757 aa7.02□□□□□ -1.29
CDHR3-201ENST00000317716 OR10R2Q8NGX6 335 aa7.02□□□□□ -1.29
CDHR3-201ENST00000317716 ZNF563Q8TA94 476 aa7.02□□□□□ -1.29
CDHR3-201ENST00000317716 ABHD4Q8TB40 342 aa7.02□□□□□ -1.29
CDHR3-201ENST00000317716 CMKLR1Q99788 373 aa7.02□□□□□ -1.29
CDHR3-201ENST00000317716 BCL2L14Q9BZR8 327 aa7.02□□□□□ -1.29
CDHR3-201ENST00000317716 MRPS30Q9NP92 439 aaKnown RBP7.02□□□□□ -1.29
CDHR3-201ENST00000317716 NDOR1Q9UHB4 597 aa7.02□□□□□ -1.29
CDHR3-201ENST00000317716 CLEC4EQ9ULY5 219 aa7.02□□□□□ -1.29
CDHR3-201ENST00000317716 TRAPPC4Q9Y296 219 aa7.02□□□□□ -1.29
CDHR3-201ENST00000317716 BDP1A6H8Y1 2624 aa7.02□□□□□ -1.29
CDHR3-201ENST00000317716 TBC1D3DA0A087WVF3 549 aa7.02□□□□□ -1.29
CDHR3-201ENST00000317716 TBC1D3IA0A087WXS9 549 aa7.02□□□□□ -1.29
CDHR3-201ENST00000317716 TBC1D3EA0A087X179 549 aa7.02□□□□□ -1.29
CDHR3-201ENST00000317716 TBC1D3KA0A087X1G2 549 aa7.02□□□□□ -1.29
CDHR3-201ENST00000317716 TRDV1A0A1B0GX56 115 aa7.02□□□□□ -1.29
CDHR3-201ENST00000317716 TBC1D3FA6NER0 549 aaPredicted RBP7.02□□□□□ -1.29
CDHR3-201ENST00000317716 TBC1D3LB9A6J9 549 aa7.02□□□□□ -1.29
CDHR3-201ENST00000317716 C11orf98E9PRG8 122 aa7.02□□□□□ -1.29
CDHR3-201ENST00000317716 ZNF593O00488 134 aaPredicted RBP7.02□□□□□ -1.29
CDHR3-201ENST00000317716 SLC31A1O15431 190 aa7.02□□□□□ -1.29
CDHR3-201ENST00000317716 PRAMEF2O60811 474 aa7.02□□□□□ -1.29
CDHR3-201ENST00000317716 ZNF254O75437 659 aa7.02□□□□□ -1.29
CDHR3-201ENST00000317716 IGLV3-25P01717 112 aa7.02□□□□□ -1.29
CDHR3-201ENST00000317716 HPXP02790 462 aa7.02□□□□□ -1.29
CDHR3-201ENST00000317716 TBC1D3HP0C7X1 549 aa7.02□□□□□ -1.29
CDHR3-201ENST00000317716 CRMP1Q14194 572 aa7.02□□□□□ -1.29
CDHR3-201ENST00000317716 MELKQ14680 651 aa7.02□□□□□ -1.29
CDHR3-201ENST00000317716 NFATC4Q14934 902 aa7.02□□□□□ -1.29
CDHR3-201ENST00000317716 OCLNQ16625 522 aa7.02□□□□□ -1.29
CDHR3-201ENST00000317716 TMEM44Q2T9K0 475 aa7.02□□□□□ -1.29
CDHR3-201ENST00000317716 DEFB134Q4QY38 66 aa7.02□□□□□ -1.29
CDHR3-201ENST00000317716 TBC1D3GQ6DHY5 549 aa7.02□□□□□ -1.29
CDHR3-201ENST00000317716 TBC1D3CQ6IPX1 549 aa7.02□□□□□ -1.29
CDHR3-201ENST00000317716 SLC25A24Q6NUK1 477 aa7.02□□□□□ -1.29
CDHR3-201ENST00000317716 QSOX2Q6ZRP7 698 aa7.02□□□□□ -1.29
CDHR3-201ENST00000317716 GID4Q8IVV7 300 aa7.02□□□□□ -1.29
CDHR3-201ENST00000317716 TBC1D3Q8IZP1 549 aaPredicted RBP7.02□□□□□ -1.29
CDHR3-201ENST00000317716 LINC00471Q8N535 108 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms