RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 HK1P19367 917 aa12.1□□□□□ -0.47
CPNE1-201ENST00000317677 PTBP1P26599 531 aaKnown RBP eCLIP12.1□□□□□ -0.47
CPNE1-201ENST00000317677 AFF3P51826 1226 aaKnown RBP12.1□□□□□ -0.47
CPNE1-201ENST00000317677 CDH12P55289 794 aa12.1□□□□□ -0.47
CPNE1-201ENST00000317677 CFHR1Q03591 330 aa12.1□□□□□ -0.47
CPNE1-201ENST00000317677 ZNF628Q5EBL2 1059 aa12.1□□□□□ -0.47
CPNE1-201ENST00000317677 RRM2BQ7LG56 351 aa12.1□□□□□ -0.47
CPNE1-201ENST00000317677 LGI4Q8N135 537 aa12.1□□□□□ -0.47
CPNE1-201ENST00000317677 ZNF655Q8N720 491 aaPredicted RBP12.1□□□□□ -0.47
CPNE1-201ENST00000317677 OR5T2Q8NGG2 359 aa12.1□□□□□ -0.47
CPNE1-201ENST00000317677 COL26A1Q96A83 441 aa12.1□□□□□ -0.47
CPNE1-201ENST00000317677 ZNF285Q96NJ3 590 aa12.1□□□□□ -0.47
CPNE1-201ENST00000317677 TGM7Q96PF1 710 aa12.1□□□□□ -0.47
CPNE1-201ENST00000317677 CCDC3Q9BQI4 270 aa12.1□□□□□ -0.47
CPNE1-201ENST00000317677 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.1□□□□□ -0.47
CPNE1-201ENST00000317677 BCL2L10Q9HD36 194 aa12.1□□□□□ -0.47
CPNE1-201ENST00000317677 ACER3Q9NUN7 267 aa12.1□□□□□ -0.47
CPNE1-201ENST00000317677 RLIMQ9NVW2 624 aa12.1□□□□□ -0.47
CPNE1-201ENST00000317677 MS4A12Q9NXJ0 267 aa12.1□□□□□ -0.47
CPNE1-201ENST00000317677 COPS3Q9UNS2 423 aa12.1□□□□□ -0.47
CPNE1-201ENST00000317677 LIPT1Q9Y234 373 aa12.1□□□□□ -0.47
CPNE1-201ENST00000317677 KCNMB2Q9Y691 235 aa12.1□□□□□ -0.47
CPNE1-201ENST00000317677 ENPP4Q9Y6X5 453 aa12.1□□□□□ -0.47
CPNE1-201ENST00000317677 ADAMTS20P59510 1910 aa12.1□□□□□ -0.47
CPNE1-201ENST00000317677 TGFBR3LH3BV60 316 aa12.09□□□□□ -0.47
CPNE1-201ENST00000317677 TNFRSF11BO00300 401 aa12.09□□□□□ -0.47
CPNE1-201ENST00000317677 SLC30A4O14863 429 aa12.09□□□□□ -0.47
CPNE1-201ENST00000317677 TSC22D2O75157 780 aa12.09□□□□□ -0.47
CPNE1-201ENST00000317677 LDOC1O95751 146 aaPredicted RBP12.09□□□□□ -0.47
CPNE1-201ENST00000317677 NR2F1P10589 423 aa12.09□□□□□ -0.47
CPNE1-201ENST00000317677 ZNF10P21506 573 aaPredicted RBP12.09□□□□□ -0.47
CPNE1-201ENST00000317677 AZGP1P25311 298 aaKnown RBP12.09□□□□□ -0.47
CPNE1-201ENST00000317677 GGT2P36268 569 aa12.09□□□□□ -0.47
CPNE1-201ENST00000317677 PRR5P85299 388 aa12.09□□□□□ -0.47
CPNE1-201ENST00000317677 SPIBQ01892 262 aa12.09□□□□□ -0.47
CPNE1-201ENST00000317677 MGAT2Q10469 447 aa12.09□□□□□ -0.47
CPNE1-201ENST00000317677 EXOC3L2Q2M3D2 409 aa12.09□□□□□ -0.47
CPNE1-201ENST00000317677 ZNF704Q6ZNC4 412 aaPredicted RBP12.09□□□□□ -0.47
CPNE1-201ENST00000317677 DGAT2L6Q6ZPD8 337 aa12.09□□□□□ -0.47
CPNE1-201ENST00000317677 SLC35F3Q8IY50 421 aa12.09□□□□□ -0.47
CPNE1-201ENST00000317677 OR52J3Q8NH60 311 aa12.09□□□□□ -0.47
CPNE1-201ENST00000317677 YIPF5Q969M3 257 aa12.09□□□□□ -0.47
CPNE1-201ENST00000317677 ANKRD9Q96BM1 317 aaPredicted RBP12.09□□□□□ -0.47
CPNE1-201ENST00000317677 INTS12Q96CB8 462 aaKnown RBP12.09□□□□□ -0.47
CPNE1-201ENST00000317677 SLC35A4Q96G79 324 aa12.09□□□□□ -0.47
CPNE1-201ENST00000317677 MGLLQ99685 303 aa12.09□□□□□ -0.47
CPNE1-201ENST00000317677 REG4Q9BYZ8 158 aa12.09□□□□□ -0.47
CPNE1-201ENST00000317677 ZFP64Q9NPA5 681 aa12.09□□□□□ -0.47
CPNE1-201ENST00000317677 PRDM9Q9NQV7 894 aa12.09□□□□□ -0.47
CPNE1-201ENST00000317677 RHCGQ9UBD6 479 aa12.09□□□□□ -0.47
CPNE1-201ENST00000317677 MGAT4AQ9UM21 535 aa12.09□□□□□ -0.47
CPNE1-201ENST00000317677 CACNA1EQ15878 2313 aa12.09□□□□□ -0.47
CPNE1-201ENST00000317677 MYO15AQ9UKN7 3530 aa12.09□□□□□ -0.47
CPNE1-201ENST00000317677 SPTBN4Q9H254 2564 aa12.09□□□□□ -0.47
CPNE1-201ENST00000317677 DMDP11532 3685 aa12.09□□□□□ -0.47
CPNE1-201ENST00000317677 ZNF292O60281 2723 aa12.09□□□□□ -0.47
CPNE1-201ENST00000317677 A0A0A6YYC8 382 aaPredicted RBP12.09□□□□□ -0.47
CPNE1-201ENST00000317677 ZNF670-ZNF695F2Z2N8 137 aa12.09□□□□□ -0.47
CPNE1-201ENST00000317677 SMLR1H3BR10 107 aa12.09□□□□□ -0.47
CPNE1-201ENST00000317677 I3L1I5 382 aaPredicted RBP12.09□□□□□ -0.47
CPNE1-201ENST00000317677 PCDH17O14917 1159 aa12.09□□□□□ -0.47
CPNE1-201ENST00000317677 TP53P04637 393 aaPredicted RBP12.09□□□□□ -0.47
CPNE1-201ENST00000317677 CT62P0C5K7 136 aa12.09□□□□□ -0.47
CPNE1-201ENST00000317677 PRKAR1AP10644 381 aa12.09□□□□□ -0.47
CPNE1-201ENST00000317677 HOXA6P31267 233 aa12.09□□□□□ -0.47
CPNE1-201ENST00000317677 CNR2P34972 360 aa12.09□□□□□ -0.47
CPNE1-201ENST00000317677 NUP62P37198 522 aaPredicted RBP12.09□□□□□ -0.47
CPNE1-201ENST00000317677 OR1D5P58170 312 aa12.09□□□□□ -0.47
CPNE1-201ENST00000317677 EXOSC2Q13868 293 aaKnown RBP12.09□□□□□ -0.47
CPNE1-201ENST00000317677 GANABQ14697 944 aaKnown RBP12.09□□□□□ -0.47
CPNE1-201ENST00000317677 ZNF169Q14929 603 aaPredicted RBP12.09□□□□□ -0.47
CPNE1-201ENST00000317677 TUSC1Q2TAM9 212 aa12.09□□□□□ -0.47
CPNE1-201ENST00000317677 TRMT12Q53H54 448 aaKnown RBP12.09□□□□□ -0.47
CPNE1-201ENST00000317677 EXOSC6Q5RKV6 272 aaKnown RBP12.09□□□□□ -0.47
CPNE1-201ENST00000317677 BICRALQ6AI39 1079 aa12.09□□□□□ -0.47
CPNE1-201ENST00000317677 MFSD12Q6NUT3 480 aa12.09□□□□□ -0.47
CPNE1-201ENST00000317677 CDH26Q8IXH8 852 aa12.09□□□□□ -0.47
CPNE1-201ENST00000317677 OR2L13Q8N349 312 aa12.09□□□□□ -0.47
CPNE1-201ENST00000317677 SLC5A8Q8N695 610 aa12.09□□□□□ -0.47
CPNE1-201ENST00000317677 CLDN22Q8N7P3 220 aa12.09□□□□□ -0.47
CPNE1-201ENST00000317677 SLC37A3Q8NCC5 494 aa12.09□□□□□ -0.47
CPNE1-201ENST00000317677 OR6M1Q8NGM8 313 aa12.09□□□□□ -0.47
CPNE1-201ENST00000317677 CREB3L1Q96BA8 519 aa12.09□□□□□ -0.47
CPNE1-201ENST00000317677 ZG16BQ96DA0 208 aa12.09□□□□□ -0.47
CPNE1-201ENST00000317677 TCTN2Q96GX1 697 aa12.09□□□□□ -0.47
CPNE1-201ENST00000317677 PIP5K1AQ99755 562 aa12.09□□□□□ -0.47
CPNE1-201ENST00000317677 SOSTQ9BQB4 213 aa12.09□□□□□ -0.47
CPNE1-201ENST00000317677 QRSL1Q9H0R6 528 aaKnown RBP12.09□□□□□ -0.47
CPNE1-201ENST00000317677 SLC38A1Q9H2H9 487 aa12.09□□□□□ -0.47
CPNE1-201ENST00000317677 MIXL1Q9H2W2 232 aa12.09□□□□□ -0.47
CPNE1-201ENST00000317677 CLEC4MQ9H2X3 399 aaPredicted RBP12.09□□□□□ -0.47
CPNE1-201ENST00000317677 NCDNQ9UBB6 729 aa12.09□□□□□ -0.47
CPNE1-201ENST00000317677 KCND3Q9UK17 655 aa12.09□□□□□ -0.47
CPNE1-201ENST00000317677 CHST2Q9Y4C5 530 aa12.09□□□□□ -0.47
CPNE1-201ENST00000317677 hCG_1807616A0A1W2PRN6 198 aa12.08□□□□□ -0.48
CPNE1-201ENST00000317677 F8W036 122 aa12.08□□□□□ -0.48
CPNE1-201ENST00000317677 ADAMDEC1O15204 470 aa12.08□□□□□ -0.48
CPNE1-201ENST00000317677 CHST10O43529 356 aa12.08□□□□□ -0.48
CPNE1-201ENST00000317677 APOC1P02654 83 aa12.08□□□□□ -0.48
CPNE1-201ENST00000317677 STSP08842 583 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms