RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 CBLCQ9ULV8 474 aa13.09□□□□□ -0.31
VRK3-201ENST00000316763 V9GYH0 126 aa13.09□□□□□ -0.31
VRK3-201ENST00000316763 ZNF292O60281 2723 aa13.09□□□□□ -0.31
VRK3-201ENST00000316763 CPED1A4D0V7 1026 aa13.09□□□□□ -0.31
VRK3-201ENST00000316763 CYR61O00622 381 aa13.09□□□□□ -0.31
VRK3-201ENST00000316763 GFRA3O60609 400 aa13.09□□□□□ -0.31
VRK3-201ENST00000316763 ATP6V1G1O75348 118 aa13.09□□□□□ -0.31
VRK3-201ENST00000316763 RCBTB2O95199 551 aa13.09□□□□□ -0.31
VRK3-201ENST00000316763 LDOC1O95751 146 aaPredicted RBP13.09□□□□□ -0.31
VRK3-201ENST00000316763 IGHA1P01876 353 aa13.09□□□□□ -0.31
VRK3-201ENST00000316763 HLA-DPB1P04440 258 aa13.09□□□□□ -0.31
VRK3-201ENST00000316763 MSL3P1P0C860 447 aa13.09□□□□□ -0.31
VRK3-201ENST00000316763 HSD11B2P80365 405 aa13.09□□□□□ -0.31
VRK3-201ENST00000316763 SHC2P98077 582 aa13.09□□□□□ -0.31
VRK3-201ENST00000316763 XKRXQ6PP77 449 aa13.09□□□□□ -0.31
VRK3-201ENST00000316763 CD200R1LQ6Q8B3 271 aa13.09□□□□□ -0.31
VRK3-201ENST00000316763 FAM131AQ6UXB0 335 aa13.09□□□□□ -0.31
VRK3-201ENST00000316763 OR4F15Q8NGB8 312 aa13.09□□□□□ -0.31
VRK3-201ENST00000316763 FANK1Q8TC84 345 aa13.09□□□□□ -0.31
VRK3-201ENST00000316763 CHAC2Q8WUX2 184 aa13.09□□□□□ -0.31
VRK3-201ENST00000316763 TMEM239Q8WW34 195 aa13.09□□□□□ -0.31
VRK3-201ENST00000316763 NAT6Q93015 286 aa13.09□□□□□ -0.31
VRK3-201ENST00000316763 HS6ST2Q96MM7 605 aa13.09□□□□□ -0.31
VRK3-201ENST00000316763 FN3KQ9H479 309 aa13.09□□□□□ -0.31
VRK3-201ENST00000316763 ABCB9Q9NP78 766 aa13.09□□□□□ -0.31
VRK3-201ENST00000316763 SOHLH2Q9NX45 425 aa13.09□□□□□ -0.31
VRK3-201ENST00000316763 PLEKHB1Q9UF11 243 aaPredicted RBP13.09□□□□□ -0.31
VRK3-201ENST00000316763 GRIP1Q9Y3R0 1128 aa13.09□□□□□ -0.31
VRK3-201ENST00000316763 UNC13CQ8NB66 2214 aa13.09□□□□□ -0.31
VRK3-201ENST00000316763 A0A1W2PQL4 384 aaPredicted RBP13.08□□□□□ -0.32
VRK3-201ENST00000316763 FITM1A5D6W6 292 aa13.08□□□□□ -0.32
VRK3-201ENST00000316763 CDHR4A6H8M9 788 aa13.08□□□□□ -0.32
VRK3-201ENST00000316763 H3BMH7 237 aa13.08□□□□□ -0.32
VRK3-201ENST00000316763 CDC42EP2O14613 210 aa13.08□□□□□ -0.32
VRK3-201ENST00000316763 TOX3O15405 576 aaPredicted RBP13.08□□□□□ -0.32
VRK3-201ENST00000316763 COQ9O75208 318 aa13.08□□□□□ -0.32
VRK3-201ENST00000316763 CLEC2LP0C7M8 214 aa13.08□□□□□ -0.32
VRK3-201ENST00000316763 GAAP10253 952 aa13.08□□□□□ -0.32
VRK3-201ENST00000316763 IFI30P13284 250 aa13.08□□□□□ -0.32
VRK3-201ENST00000316763 PAICSP22234 425 aaKnown RBP13.08□□□□□ -0.32
VRK3-201ENST00000316763 GABRA3P34903 492 aa13.08□□□□□ -0.32
VRK3-201ENST00000316763 SOX18P35713 384 aa13.08□□□□□ -0.32
VRK3-201ENST00000316763 DAB2P98082 770 aa13.08□□□□□ -0.32
VRK3-201ENST00000316763 SCN1BQ07699 218 aa13.08□□□□□ -0.32
VRK3-201ENST00000316763 FAM53BQ14153 422 aa13.08□□□□□ -0.32
VRK3-201ENST00000316763 MAPK14Q16539 360 aa13.08□□□□□ -0.32
VRK3-201ENST00000316763 PRICKLE4Q2TBC4 344 aa13.08□□□□□ -0.32
VRK3-201ENST00000316763 TCTE1Q5JU00 501 aa13.08□□□□□ -0.32
VRK3-201ENST00000316763 KMT5CQ86Y97 462 aa13.08□□□□□ -0.32
VRK3-201ENST00000316763 CPOQ8IVL8 374 aa13.08□□□□□ -0.32
VRK3-201ENST00000316763 CA13Q8N1Q1 262 aa13.08□□□□□ -0.32
VRK3-201ENST00000316763 D2HGDHQ8N465 521 aa13.08□□□□□ -0.32
VRK3-201ENST00000316763 ZNF485Q8NCK3 441 aa13.08□□□□□ -0.32
VRK3-201ENST00000316763 OTULINQ96BN8 352 aa13.08□□□□□ -0.32
VRK3-201ENST00000316763 DIRAS2Q96HU8 199 aa13.08□□□□□ -0.32
VRK3-201ENST00000316763 SECISBP2Q96T21 854 aaKnown RBP13.08□□□□□ -0.32
VRK3-201ENST00000316763 TM9SF2Q99805 663 aa13.08□□□□□ -0.32
VRK3-201ENST00000316763 PRSS27Q9BQR3 290 aa13.08□□□□□ -0.32
VRK3-201ENST00000316763 ZNF559Q9BR84 538 aa13.08□□□□□ -0.32
VRK3-201ENST00000316763 NUDT22Q9BRQ3 303 aa13.08□□□□□ -0.32
VRK3-201ENST00000316763 DPH1Q9BZG8 443 aa13.08□□□□□ -0.32
VRK3-201ENST00000316763 SRRQ9GZT4 340 aa13.08□□□□□ -0.32
VRK3-201ENST00000316763 OR52D1Q9H346 318 aa13.08□□□□□ -0.32
VRK3-201ENST00000316763 TMEM27Q9HBJ8 222 aa13.08□□□□□ -0.32
VRK3-201ENST00000316763 SIDT1Q9NXL6 827 aaKnown RBP13.08□□□□□ -0.32
VRK3-201ENST00000316763 MAT2BQ9NZL9 334 aa13.08□□□□□ -0.32
VRK3-201ENST00000316763 ZNF223Q9UK11 482 aaPredicted RBP13.08□□□□□ -0.32
VRK3-201ENST00000316763 YARS2Q9Y2Z4 477 aaKnown RBP13.08□□□□□ -0.32
VRK3-201ENST00000316763 PCNX2A6NKB5 2137 aa13.08□□□□□ -0.32
VRK3-201ENST00000316763 FABP12A6NFH5 140 aa13.07□□□□□ -0.32
VRK3-201ENST00000316763 CASKO14936 926 aa13.07□□□□□ -0.32
VRK3-201ENST00000316763 GKN3PP0CG01 181 aa13.07□□□□□ -0.32
VRK3-201ENST00000316763 RAB38P57729 211 aa13.07□□□□□ -0.32
VRK3-201ENST00000316763 FABP5Q01469 135 aa13.07□□□□□ -0.32
VRK3-201ENST00000316763 ZNF155Q12901 538 aaPredicted RBP13.07□□□□□ -0.32
VRK3-201ENST00000316763 SELENBP1Q13228 472 aa13.07□□□□□ -0.32
VRK3-201ENST00000316763 PDZK1Q5T2W1 519 aa13.07□□□□□ -0.32
VRK3-201ENST00000316763 GARNL3Q5VVW2 1013 aa13.07□□□□□ -0.32
VRK3-201ENST00000316763 TMEM71Q6P5X7 295 aa13.07□□□□□ -0.32
VRK3-201ENST00000316763 GDPD1Q8N9F7 314 aa13.07□□□□□ -0.32
VRK3-201ENST00000316763 KIAA1143Q96AT1 154 aaPredicted RBP13.07□□□□□ -0.32
VRK3-201ENST00000316763 EFHD2Q96C19 240 aaPredicted RBP13.07□□□□□ -0.32
VRK3-201ENST00000316763 KATNB1Q9BVA0 655 aa13.07□□□□□ -0.32
VRK3-201ENST00000316763 HINT3Q9NQE9 182 aaKnown RBP13.07□□□□□ -0.32
VRK3-201ENST00000316763 INIPQ9NRY2 104 aa13.07□□□□□ -0.32
VRK3-201ENST00000316763 ASB6Q9NWX5 421 aa13.07□□□□□ -0.32
VRK3-201ENST00000316763 NPAP1Q9NZP6 1156 aa13.07□□□□□ -0.32
VRK3-201ENST00000316763 IL20RAQ9UHF4 553 aa13.07□□□□□ -0.32
VRK3-201ENST00000316763 TBC1D24Q9ULP9 559 aa13.07□□□□□ -0.32
VRK3-201ENST00000316763 MED31Q9Y3C7 131 aa13.07□□□□□ -0.32
VRK3-201ENST00000316763 CENPVL1A0A0U1RR11 272 aa13.07□□□□□ -0.32
VRK3-201ENST00000316763 A0A1W2PQM1 296 aa13.07□□□□□ -0.32
VRK3-201ENST00000316763 FOXS1O43638 330 aa13.07□□□□□ -0.32
VRK3-201ENST00000316763 DYRK3O43781 588 aa13.07□□□□□ -0.32
VRK3-201ENST00000316763 BRINP1O60477 761 aa13.07□□□□□ -0.32
VRK3-201ENST00000316763 PRG2P13727 222 aa13.07□□□□□ -0.32
VRK3-201ENST00000316763 HTR2AP28223 471 aa13.07□□□□□ -0.32
VRK3-201ENST00000316763 TGM4P49221 684 aa13.07□□□□□ -0.32
VRK3-201ENST00000316763 DUSP3P51452 185 aaPredicted RBP13.07□□□□□ -0.32
VRK3-201ENST00000316763 PPP3R1P63098 170 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms