RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 MTDHQ86UE4 582 aaKnown RBP17.86■□□□□ 0.45
VEGFB-201ENST00000309422 GTF2IRD2Q86UP8 949 aa17.86■□□□□ 0.45
VEGFB-201ENST00000309422 RETREG3Q86VR2 466 aa17.86■□□□□ 0.45
VEGFB-201ENST00000309422 VRK2Q86Y07 508 aa17.86■□□□□ 0.45
VEGFB-201ENST00000309422 TNIP2Q8NFZ5 429 aa17.86■□□□□ 0.45
VEGFB-201ENST00000309422 LRRC58Q96CX6 371 aa17.86■□□□□ 0.45
VEGFB-201ENST00000309422 UCN2Q96RP3 112 aa17.86■□□□□ 0.45
VEGFB-201ENST00000309422 ACER3Q9NUN7 267 aa17.86■□□□□ 0.45
VEGFB-201ENST00000309422 DNAJB12Q9NXW2 375 aaKnown RBP17.86■□□□□ 0.45
VEGFB-201ENST00000309422 CLCF1Q9UBD9 225 aa17.86■□□□□ 0.45
VEGFB-201ENST00000309422 ZNF407Q9C0G0 2248 aa17.86■□□□□ 0.45
VEGFB-201ENST00000309422 CDHR4A6H8M9 788 aa17.85■□□□□ 0.45
VEGFB-201ENST00000309422 EEF1E1-BLOC1S5C9J1V9 151 aa17.85■□□□□ 0.45
VEGFB-201ENST00000309422 TNFSF11O14788 317 aa17.85■□□□□ 0.45
VEGFB-201ENST00000309422 EEF1E1O43324 174 aaKnown RBP17.85■□□□□ 0.45
VEGFB-201ENST00000309422 SNX3O60493 162 aa17.85■□□□□ 0.45
VEGFB-201ENST00000309422 COX6B1P14854 86 aa17.85■□□□□ 0.45
VEGFB-201ENST00000309422 CPA2P48052 419 aa17.85■□□□□ 0.45
VEGFB-201ENST00000309422 IDH2P48735 452 aaKnown RBP17.85■□□□□ 0.45
VEGFB-201ENST00000309422 SESN3P58005 492 aa17.85■□□□□ 0.45
VEGFB-201ENST00000309422 SLC25A53Q5H9E4 307 aa17.85■□□□□ 0.45
VEGFB-201ENST00000309422 SERPINA11Q86U17 422 aa17.85■□□□□ 0.45
VEGFB-201ENST00000309422 OR10D3Q8NH80 312 aa17.85■□□□□ 0.45
VEGFB-201ENST00000309422 SLC26A7Q8TE54 656 aa17.85■□□□□ 0.45
VEGFB-201ENST00000309422 CNOT9Q92600 299 aaKnown RBP17.85■□□□□ 0.45
VEGFB-201ENST00000309422 CPNE4Q96A23 557 aaPredicted RBP17.85■□□□□ 0.45
VEGFB-201ENST00000309422 ZG16BQ96DA0 208 aa17.85■□□□□ 0.45
VEGFB-201ENST00000309422 ZHX1-C8orf76Q96EF9 292 aa17.85■□□□□ 0.45
VEGFB-201ENST00000309422 SLC24A3Q9HC58 644 aa17.85■□□□□ 0.45
VEGFB-201ENST00000309422 NCKAP5O14513 1909 aa17.84■□□□□ 0.45
VEGFB-201ENST00000309422 DOPEY1Q5JWR5 2465 aa17.84■□□□□ 0.45
VEGFB-201ENST00000309422 CLDN24A6NM45 220 aa17.84■□□□□ 0.45
VEGFB-201ENST00000309422 DCTN3O75935 186 aa17.84■□□□□ 0.45
VEGFB-201ENST00000309422 RCBTB2O95199 551 aa17.84■□□□□ 0.45
VEGFB-201ENST00000309422 IL18BPO95998 194 aa17.84■□□□□ 0.45
VEGFB-201ENST00000309422 CRHP06850 196 aa17.84■□□□□ 0.45
VEGFB-201ENST00000309422 TFPIP10646 304 aa17.84■□□□□ 0.45
VEGFB-201ENST00000309422 DRD4P21917 467 aa17.84■□□□□ 0.45
VEGFB-201ENST00000309422 AQP1P29972 269 aa17.84■□□□□ 0.45
VEGFB-201ENST00000309422 PRKAR1BP31321 381 aa17.84■□□□□ 0.45
VEGFB-201ENST00000309422 CEACAM8P31997 349 aaPredicted RBP17.84■□□□□ 0.45
VEGFB-201ENST00000309422 PEX19P40855 299 aa17.84■□□□□ 0.45
VEGFB-201ENST00000309422 CARD18P57730 90 aa17.84■□□□□ 0.45
VEGFB-201ENST00000309422 TOMM34Q15785 309 aaPredicted RBP17.84■□□□□ 0.45
VEGFB-201ENST00000309422 ERICH5Q6P6B1 374 aa17.84■□□□□ 0.45
VEGFB-201ENST00000309422 PLEKHM3Q6ZWE6 761 aa17.84■□□□□ 0.45
VEGFB-201ENST00000309422 GGNQ86UU5 652 aa17.84■□□□□ 0.45
VEGFB-201ENST00000309422 ARMC8Q8IUR7 673 aa17.84■□□□□ 0.45
VEGFB-201ENST00000309422 C9orf106Q8NAJ2 232 aa17.84■□□□□ 0.45
VEGFB-201ENST00000309422 POC1BQ8TC44 478 aa17.84■□□□□ 0.45
VEGFB-201ENST00000309422 SLC35B4Q969S0 331 aa17.84■□□□□ 0.45
VEGFB-201ENST00000309422 INTS12Q96CB8 462 aaKnown RBP17.84■□□□□ 0.45
VEGFB-201ENST00000309422 IKZF5Q9H5V7 419 aa17.84■□□□□ 0.45
VEGFB-201ENST00000309422 EVA1AQ9H8M9 152 aa17.84■□□□□ 0.45
VEGFB-201ENST00000309422 EFCAB1Q9HAE3 211 aa17.84■□□□□ 0.45
VEGFB-201ENST00000309422 SELENONQ9NZV5 590 aa17.84■□□□□ 0.45
VEGFB-201ENST00000309422 RPS6KB2Q9UBS0 482 aa17.84■□□□□ 0.45
VEGFB-201ENST00000309422 NUP214P35658 2090 aaPredicted RBP17.83■□□□□ 0.45
VEGFB-201ENST00000309422 USP9XQ93008 2570 aaPredicted RBP17.83■□□□□ 0.45
VEGFB-201ENST00000309422 NDUFAB1O14561 156 aa17.83■□□□□ 0.45
VEGFB-201ENST00000309422 COX4I1P13073 169 aa17.83■□□□□ 0.45
VEGFB-201ENST00000309422 PSMA4P25789 261 aaKnown RBP17.83■□□□□ 0.45
VEGFB-201ENST00000309422 ASCL1P50553 236 aa17.83■□□□□ 0.45
VEGFB-201ENST00000309422 POLR2HP52434 150 aaKnown RBP17.83■□□□□ 0.45
VEGFB-201ENST00000309422 MAP2K6P52564 334 aa17.83■□□□□ 0.45
VEGFB-201ENST00000309422 SUCLG1P53597 346 aaKnown RBP17.83■□□□□ 0.45
VEGFB-201ENST00000309422 CSNK2A1P68400 391 aaPredicted RBP17.83■□□□□ 0.45
VEGFB-201ENST00000309422 TMEM176BQ3YBM2 270 aaPredicted RBP17.83■□□□□ 0.45
VEGFB-201ENST00000309422 PATL1Q86TB9 770 aaKnown RBP17.83■□□□□ 0.45
VEGFB-201ENST00000309422 CADM2Q8N3J6 435 aa17.83■□□□□ 0.45
VEGFB-201ENST00000309422 CNEP1R1Q8N9A8 125 aa17.83■□□□□ 0.45
VEGFB-201ENST00000309422 OR10A6Q8NH74 314 aa17.83■□□□□ 0.45
VEGFB-201ENST00000309422 FNDC9Q8TBE3 224 aa17.83■□□□□ 0.45
VEGFB-201ENST00000309422 RASSF5Q8WWW0 418 aa17.83■□□□□ 0.45
VEGFB-201ENST00000309422 DDIT4LQ96D03 193 aa17.83■□□□□ 0.45
VEGFB-201ENST00000309422 RCN3Q96D15 328 aa17.83■□□□□ 0.45
VEGFB-201ENST00000309422 PIGMQ9H3S5 423 aa17.83■□□□□ 0.45
VEGFB-201ENST00000309422 KAT8Q9H7Z6 458 aaKnown RBP17.83■□□□□ 0.45
VEGFB-201ENST00000309422 CHRNA9Q9UGM1 479 aa17.83■□□□□ 0.45
VEGFB-201ENST00000309422 ARL2BPQ9Y2Y0 163 aa17.83■□□□□ 0.45
VEGFB-201ENST00000309422 EMC9Q9Y3B6 208 aa17.83■□□□□ 0.45
VEGFB-201ENST00000309422 DNAJC13O75165 2243 aa17.83■□□□□ 0.44
VEGFB-201ENST00000309422 ETV2O00321 342 aaPredicted RBP17.82■□□□□ 0.44
VEGFB-201ENST00000309422 FAAHO00519 579 aa17.82■□□□□ 0.44
VEGFB-201ENST00000309422 FBP2O00757 339 aa17.82■□□□□ 0.44
VEGFB-201ENST00000309422 ADAMDEC1O15204 470 aa17.82■□□□□ 0.44
VEGFB-201ENST00000309422 HNRNPRO43390 633 aaKnown RBP17.82■□□□□ 0.44
VEGFB-201ENST00000309422 CXCL13O43927 109 aa17.82■□□□□ 0.44
VEGFB-201ENST00000309422 DNAJA2O60884 412 aa17.82■□□□□ 0.44
VEGFB-201ENST00000309422 OPN1LWP04000 364 aa17.82■□□□□ 0.44
VEGFB-201ENST00000309422 SLC1A3P43003 542 aa17.82■□□□□ 0.44
VEGFB-201ENST00000309422 CTBP2P56545 445 aa17.82■□□□□ 0.44
VEGFB-201ENST00000309422 EPS8Q12929 822 aa17.82■□□□□ 0.44
VEGFB-201ENST00000309422 MAPK11Q15759 364 aa17.82■□□□□ 0.44
VEGFB-201ENST00000309422 WBP2NLQ6ICG8 309 aa17.82■□□□□ 0.44
VEGFB-201ENST00000309422 NANOGP8Q6NSW7 305 aa17.82■□□□□ 0.44
VEGFB-201ENST00000309422 SEM1Q6ZVN7 128 aa17.82■□□□□ 0.44
VEGFB-201ENST00000309422 ADGRE4PQ86SQ3 457 aa17.82■□□□□ 0.44
VEGFB-201ENST00000309422 GCNT2Q8N0V5 402 aa17.82■□□□□ 0.44
VEGFB-201ENST00000309422 POU5F2Q8N7G0 328 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms