RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 OR5T3Q8NGG3 340 aa13.54□□□□□ -0.24
PTPN9-201ENST00000306726 LMF1Q96S06 567 aa13.54□□□□□ -0.24
PTPN9-201ENST00000306726 MS4A8Q9BY19 250 aa13.54□□□□□ -0.24
PTPN9-201ENST00000306726 KLHL21Q9UJP4 597 aa13.54□□□□□ -0.24
PTPN9-201ENST00000306726 KHNYNO15037 678 aaKnown RBP13.54□□□□□ -0.24
PTPN9-201ENST00000306726 NPC1O15118 1278 aa13.54□□□□□ -0.24
PTPN9-201ENST00000306726 STX11O75558 287 aa13.54□□□□□ -0.24
PTPN9-201ENST00000306726 C1QBP02746 253 aa13.54□□□□□ -0.24
PTPN9-201ENST00000306726 PRNPP04156 253 aa13.54□□□□□ -0.24
PTPN9-201ENST00000306726 ADH5P11766 374 aa13.54□□□□□ -0.24
PTPN9-201ENST00000306726 HPGDP15428 266 aa13.54□□□□□ -0.24
PTPN9-201ENST00000306726 POU3F2P20265 443 aaPredicted RBP13.54□□□□□ -0.24
PTPN9-201ENST00000306726 BSGP35613 385 aa13.54□□□□□ -0.24
PTPN9-201ENST00000306726 APOOLQ6UXV4 268 aa13.54□□□□□ -0.24
PTPN9-201ENST00000306726 GDPGP1Q6ZNW5 385 aa13.54□□□□□ -0.24
PTPN9-201ENST00000306726 LINC00299Q6ZSB3 139 aa13.54□□□□□ -0.24
PTPN9-201ENST00000306726 GDF7Q7Z4P5 450 aa13.54□□□□□ -0.24
PTPN9-201ENST00000306726 CLDN22Q8N7P3 220 aa13.54□□□□□ -0.24
PTPN9-201ENST00000306726 OSTF1Q92882 214 aa13.54□□□□□ -0.24
PTPN9-201ENST00000306726 HSPA12BQ96MM6 686 aa13.54□□□□□ -0.24
PTPN9-201ENST00000306726 PDCD10Q9BUL8 212 aa13.54□□□□□ -0.24
PTPN9-201ENST00000306726 UNC13CQ8NB66 2214 aa13.54□□□□□ -0.24
PTPN9-201ENST00000306726 FLRT2O43155 660 aa13.54□□□□□ -0.24
PTPN9-201ENST00000306726 MT-ND5P03915 603 aa13.54□□□□□ -0.24
PTPN9-201ENST00000306726 AHCYP23526 432 aa13.54□□□□□ -0.24
PTPN9-201ENST00000306726 ACTR1BP42025 376 aa13.54□□□□□ -0.24
PTPN9-201ENST00000306726 ACTR1AP61163 376 aa13.54□□□□□ -0.24
PTPN9-201ENST00000306726 ESCO2Q56NI9 601 aa13.54□□□□□ -0.24
PTPN9-201ENST00000306726 ZNF322Q6U7Q0 402 aaPredicted RBP13.54□□□□□ -0.24
PTPN9-201ENST00000306726 QSOX2Q6ZRP7 698 aa13.54□□□□□ -0.24
PTPN9-201ENST00000306726 ZNF511Q8NB15 262 aa13.54□□□□□ -0.24
PTPN9-201ENST00000306726 MOSPD2Q8NHP6 518 aa13.54□□□□□ -0.24
PTPN9-201ENST00000306726 TSACCQ96A04 125 aaPredicted RBP13.54□□□□□ -0.24
PTPN9-201ENST00000306726 PHF7Q9BWX1 381 aaPredicted RBP13.54□□□□□ -0.24
PTPN9-201ENST00000306726 SAV1Q9H4B6 383 aaPredicted RBP13.54□□□□□ -0.24
PTPN9-201ENST00000306726 WDR26Q9H7D7 661 aa13.54□□□□□ -0.24
PTPN9-201ENST00000306726 LSM2Q9Y333 95 aaKnown RBP13.54□□□□□ -0.24
PTPN9-201ENST00000306726 SCN8AQ9UQD0 1980 aa13.54□□□□□ -0.24
PTPN9-201ENST00000306726 ATP6V1G2-DDX39BF2Z307 99 aa13.53□□□□□ -0.24
PTPN9-201ENST00000306726 GSTM3P21266 225 aa13.53□□□□□ -0.24
PTPN9-201ENST00000306726 MMP12P39900 470 aa13.53□□□□□ -0.24
PTPN9-201ENST00000306726 BCL6P41182 706 aa13.53□□□□□ -0.24
PTPN9-201ENST00000306726 ZNF770Q6IQ21 691 aaPredicted RBP13.53□□□□□ -0.24
PTPN9-201ENST00000306726 FAM26EQ8N5C1 309 aa13.53□□□□□ -0.24
PTPN9-201ENST00000306726 SUN3Q8TAQ9 357 aa13.53□□□□□ -0.24
PTPN9-201ENST00000306726 SLX1AQ9BQ83 275 aa13.53□□□□□ -0.24
PTPN9-201ENST00000306726 NXF2Q9GZY0 626 aaKnown RBP13.53□□□□□ -0.24
PTPN9-201ENST00000306726 SIRT3Q9NTG7 399 aaPredicted RBP13.53□□□□□ -0.24
PTPN9-201ENST00000306726 FBXL2Q9UKC9 423 aa13.53□□□□□ -0.24
PTPN9-201ENST00000306726 PLGP00747 810 aaPredicted RBP13.53□□□□□ -0.24
PTPN9-201ENST00000306726 ADRB1P08588 477 aa13.53□□□□□ -0.24
PTPN9-201ENST00000306726 ZNF888P0CJ79 500 aaPredicted RBP13.53□□□□□ -0.24
PTPN9-201ENST00000306726 RPL35P42766 123 aaKnown RBP13.53□□□□□ -0.24
PTPN9-201ENST00000306726 FAM74A1Q5RGS3 127 aa13.53□□□□□ -0.24
PTPN9-201ENST00000306726 THSD4Q6ZMP0 1018 aa13.53□□□□□ -0.24
PTPN9-201ENST00000306726 TMPRSS12Q86WS5 348 aa13.53□□□□□ -0.24
PTPN9-201ENST00000306726 ZNF687Q8N1G0 1237 aa13.53□□□□□ -0.24
PTPN9-201ENST00000306726 ASB12Q8WXK4 309 aa13.53□□□□□ -0.24
PTPN9-201ENST00000306726 SMPDL3BQ92485 455 aa13.53□□□□□ -0.24
PTPN9-201ENST00000306726 KCNK15Q9H427 330 aa13.53□□□□□ -0.24
PTPN9-201ENST00000306726 SVILO95425 2214 aa13.53□□□□□ -0.24
PTPN9-201ENST00000306726 MBTPS2O43462 519 aa13.53□□□□□ -0.24
PTPN9-201ENST00000306726 MINDY4Q4G0A6 757 aa13.53□□□□□ -0.24
PTPN9-201ENST00000306726 C17orf107Q6ZR85 190 aa13.53□□□□□ -0.24
PTPN9-201ENST00000306726 NR2C2APQ86WQ0 139 aa13.53□□□□□ -0.24
PTPN9-201ENST00000306726 PLCZ1Q86YW0 608 aa13.53□□□□□ -0.24
PTPN9-201ENST00000306726 FOXRED2Q8IWF2 684 aa13.53□□□□□ -0.24
PTPN9-201ENST00000306726 ABHD4Q8TB40 342 aa13.53□□□□□ -0.24
PTPN9-201ENST00000306726 ZDHHC1Q8WTX9 485 aa13.53□□□□□ -0.24
PTPN9-201ENST00000306726 ARHGAP9Q9BRR9 750 aa13.53□□□□□ -0.24
PTPN9-201ENST00000306726 SCML1Q9UN30 329 aa13.53□□□□□ -0.24
PTPN9-201ENST00000306726 IER3IP1Q9Y5U9 82 aa13.53□□□□□ -0.24
PTPN9-201ENST00000306726 A0A087WV48 116 aa13.52□□□□□ -0.24
PTPN9-201ENST00000306726 UNC119BA6NIH7 251 aa13.52□□□□□ -0.24
PTPN9-201ENST00000306726 LEUTXA8MZ59 168 aa13.52□□□□□ -0.24
PTPN9-201ENST00000306726 CHP2O43745 196 aa13.52□□□□□ -0.24
PTPN9-201ENST00000306726 NHLRC1Q6VVB1 395 aa13.52□□□□□ -0.24
PTPN9-201ENST00000306726 BMP8AQ7Z5Y6 402 aa13.52□□□□□ -0.24
PTPN9-201ENST00000306726 GALNT6Q8NCL4 622 aa13.52□□□□□ -0.24
PTPN9-201ENST00000306726 SRFBP1Q8NEF9 429 aaKnown RBP13.52□□□□□ -0.24
PTPN9-201ENST00000306726 OR2T4Q8NH00 348 aa13.52□□□□□ -0.24
PTPN9-201ENST00000306726 THEM6Q8WUY1 208 aa13.52□□□□□ -0.24
PTPN9-201ENST00000306726 PATE1Q8WXA2 126 aa13.52□□□□□ -0.24
PTPN9-201ENST00000306726 THAP4Q8WY91 577 aa13.52□□□□□ -0.24
PTPN9-201ENST00000306726 C3orf49Q96BT1 292 aa13.52□□□□□ -0.24
PTPN9-201ENST00000306726 CXorf40BQ96DE9 158 aa13.52□□□□□ -0.24
PTPN9-201ENST00000306726 TSPAN10Q9H1Z9 355 aaPredicted RBP13.52□□□□□ -0.24
PTPN9-201ENST00000306726 TAS2R10Q9NYW0 307 aa13.52□□□□□ -0.24
PTPN9-201ENST00000306726 UBQLN2Q9UHD9 624 aa13.52□□□□□ -0.24
PTPN9-201ENST00000306726 C11orf98E9PRG8 122 aa13.52□□□□□ -0.25
PTPN9-201ENST00000306726 WNT1P04628 370 aa13.52□□□□□ -0.25
PTPN9-201ENST00000306726 C12orf73Q69YU5 71 aa13.52□□□□□ -0.25
PTPN9-201ENST00000306726 ENPP7Q6UWV6 458 aa13.52□□□□□ -0.25
PTPN9-201ENST00000306726 KIAA1324Q6UXG2 1013 aaKnown RBP13.52□□□□□ -0.25
PTPN9-201ENST00000306726 C4orf47A7E2U8 309 aa13.52□□□□□ -0.25
PTPN9-201ENST00000306726 H0Y8X5 98 aa13.52□□□□□ -0.25
PTPN9-201ENST00000306726 GMDSO60547 372 aa13.52□□□□□ -0.25
PTPN9-201ENST00000306726 IFNA7P01567 189 aa13.52□□□□□ -0.25
PTPN9-201ENST00000306726 MAKP20794 623 aa13.52□□□□□ -0.25
PTPN9-201ENST00000306726 GDNFP39905 211 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms