RNA–Protein interactions for RNA: ENST00000304954.3

CSN3-201, Transcript of casein kappa, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSN3, Length 836 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSN3-201ENST00000304954 TLE4Q04727 773 aa3.27□□□□□ -1.89
CSN3-201ENST00000304954 PSG7Q13046 419 aa3.27□□□□□ -1.89
CSN3-201ENST00000304954 RIPK1Q13546 671 aa3.27□□□□□ -1.89
CSN3-201ENST00000304954 ARFRP1Q13795 201 aa3.27□□□□□ -1.89
CSN3-201ENST00000304954 SYPL1Q16563 259 aa3.27□□□□□ -1.89
CSN3-201ENST00000304954 TIGITQ495A1 244 aa3.27□□□□□ -1.89
CSN3-201ENST00000304954 FAM71F2Q6NXP2 309 aa3.27□□□□□ -1.89
CSN3-201ENST00000304954 ACOT1Q86TX2 421 aa3.27□□□□□ -1.89
CSN3-201ENST00000304954 VRK2Q86Y07 508 aa3.27□□□□□ -1.89
CSN3-201ENST00000304954 SLC35A5Q9BS91 424 aa3.27□□□□□ -1.89
CSN3-201ENST00000304954 PLGRKTQ9HBL7 147 aa3.27□□□□□ -1.89
CSN3-201ENST00000304954 GNG12Q9UBI6 72 aa3.27□□□□□ -1.89
CSN3-201ENST00000304954 XPO7Q9UIA9 1087 aaKnown RBP3.27□□□□□ -1.89
CSN3-201ENST00000304954 ZNF221Q9UK13 617 aa3.27□□□□□ -1.89
CSN3-201ENST00000304954 UBQLN1Q9UMX0 589 aaKnown RBP3.27□□□□□ -1.89
CSN3-201ENST00000304954 ATP10DQ9P241 1426 aa3.27□□□□□ -1.89
CSN3-201ENST00000304954 IGKV6D-21A0A0A0MT36 114 aa3.26□□□□□ -1.89
CSN3-201ENST00000304954 ZNF705EA8MWA4 302 aaPredicted RBP3.26□□□□□ -1.89
CSN3-201ENST00000304954 N4BP1O75113 896 aaKnown RBP3.26□□□□□ -1.89
CSN3-201ENST00000304954 LRATO95237 230 aa3.26□□□□□ -1.89
CSN3-201ENST00000304954 GNA14O95837 355 aa3.26□□□□□ -1.89
CSN3-201ENST00000304954 MBD3O95983 291 aa3.26□□□□□ -1.89
CSN3-201ENST00000304954 TIMP1P01033 207 aa3.26□□□□□ -1.89
CSN3-201ENST00000304954 NCF1P14598 390 aaPredicted RBP3.26□□□□□ -1.89
CSN3-201ENST00000304954 CYP2B6P20813 491 aa3.26□□□□□ -1.89
CSN3-201ENST00000304954 FUT3P21217 361 aa3.26□□□□□ -1.89
CSN3-201ENST00000304954 NT5EP21589 574 aa3.26□□□□□ -1.89
CSN3-201ENST00000304954 CD86P42081 329 aa3.26□□□□□ -1.89
CSN3-201ENST00000304954 HSD17B7P56937 341 aa3.26□□□□□ -1.89
CSN3-201ENST00000304954 KRTAP12-2P59991 146 aa3.26□□□□□ -1.89
CSN3-201ENST00000304954 SLC36A3Q495N2 470 aa3.26□□□□□ -1.89
CSN3-201ENST00000304954 FAM199XQ6PEV8 388 aaPredicted RBP3.26□□□□□ -1.89
CSN3-201ENST00000304954 UNQ9370/PRO34162Q6UXP9 181 aa3.26□□□□□ -1.89
CSN3-201ENST00000304954 MOB3BQ86TA1 216 aa3.26□□□□□ -1.89
CSN3-201ENST00000304954 NBPF5PQ86XG9 351 aaPredicted RBP3.26□□□□□ -1.89
CSN3-201ENST00000304954 SYT14Q8NB59 555 aa3.26□□□□□ -1.89
CSN3-201ENST00000304954 DENND6BQ8NEG7 585 aa3.26□□□□□ -1.89
CSN3-201ENST00000304954 STXBP6Q8NFX7 210 aa3.26□□□□□ -1.89
CSN3-201ENST00000304954 C7orf33Q8WU49 177 aa3.26□□□□□ -1.89
CSN3-201ENST00000304954 RPL3LQ92901 407 aaKnown RBP3.26□□□□□ -1.89
CSN3-201ENST00000304954 ZNF799Q96GE5 643 aa3.26□□□□□ -1.89
CSN3-201ENST00000304954 TMEM101Q96IK0 257 aa3.26□□□□□ -1.89
CSN3-201ENST00000304954 C12orf66Q96MD2 445 aa3.26□□□□□ -1.89
CSN3-201ENST00000304954 SDHCQ99643 169 aaPredicted RBP3.26□□□□□ -1.89
CSN3-201ENST00000304954 PAIP2Q9BPZ3 127 aaKnown RBP3.26□□□□□ -1.89
CSN3-201ENST00000304954 NXF5Q9H1B4 397 aaKnown RBP3.26□□□□□ -1.89
CSN3-201ENST00000304954 OR51J1Q9H342 316 aa3.26□□□□□ -1.89
CSN3-201ENST00000304954 SLC35D1Q9NTN3 355 aa3.26□□□□□ -1.89
CSN3-201ENST00000304954 ANGPT2O15123 496 aa3.25□□□□□ -1.89
CSN3-201ENST00000304954 ZSCAN12O43309 604 aa3.25□□□□□ -1.89
CSN3-201ENST00000304954 PRKYO43930 277 aa3.25□□□□□ -1.89
CSN3-201ENST00000304954 TBX19O60806 448 aa3.25□□□□□ -1.89
CSN3-201ENST00000304954 HEXBP07686 556 aa3.25□□□□□ -1.89
CSN3-201ENST00000304954 PRDX3P30048 256 aaKnown RBP3.25□□□□□ -1.89
CSN3-201ENST00000304954 PRKXP51817 358 aa3.25□□□□□ -1.89
CSN3-201ENST00000304954 ZNF133P52736 654 aaPredicted RBP3.25□□□□□ -1.89
CSN3-201ENST00000304954 EWSR1Q01844 656 aaKnown RBP eCLIP3.25□□□□□ -1.89
CSN3-201ENST00000304954 MAP2K1Q02750 393 aaPredicted RBP3.25□□□□□ -1.89
CSN3-201ENST00000304954 ATF7IP2Q5U623 682 aa3.25□□□□□ -1.89
CSN3-201ENST00000304954 NCR3LG1Q68D85 454 aa3.25□□□□□ -1.89
CSN3-201ENST00000304954 CCDC50Q8IVM0 306 aa3.25□□□□□ -1.89
CSN3-201ENST00000304954 SLC34A3Q8N130 599 aa3.25□□□□□ -1.89
CSN3-201ENST00000304954 RNF138Q8WVD3 245 aa3.25□□□□□ -1.89
CSN3-201ENST00000304954 UCN3Q969E3 161 aa3.25□□□□□ -1.89
CSN3-201ENST00000304954 HIST1H4GQ99525 98 aa3.25□□□□□ -1.89
CSN3-201ENST00000304954 RIT2Q99578 217 aa3.25□□□□□ -1.89
CSN3-201ENST00000304954 ARHGDIGQ99819 225 aa3.25□□□□□ -1.89
CSN3-201ENST00000304954 SELENOIQ9C0D9 397 aa3.25□□□□□ -1.89
CSN3-201ENST00000304954 POLR2J2Q9GZM3 115 aaKnown RBP3.25□□□□□ -1.89
CSN3-201ENST00000304954 MAGT1Q9H0U3 335 aa3.25□□□□□ -1.89
CSN3-201ENST00000304954 POLR2J3Q9H1A7 115 aaKnown RBP3.25□□□□□ -1.89
CSN3-201ENST00000304954 YY1AP1Q9H869 796 aa3.25□□□□□ -1.89
CSN3-201ENST00000304954 LAMP5Q9UJQ1 280 aa3.25□□□□□ -1.89
CSN3-201ENST00000304954 ANGPTL2Q9UKU9 493 aa3.25□□□□□ -1.89
CSN3-201ENST00000304954 RPH3ALQ9UNE2 315 aa3.25□□□□□ -1.89
CSN3-201ENST00000304954 A0A0J9YXY3 114 aa3.24□□□□□ -1.89
CSN3-201ENST00000304954 A0A1W2PNU3 283 aaPredicted RBP3.24□□□□□ -1.89
CSN3-201ENST00000304954 K7N7A8 449 aa3.24□□□□□ -1.89
CSN3-201ENST00000304954 BCAS1O75363 584 aaPredicted RBP3.24□□□□□ -1.89
CSN3-201ENST00000304954 UFL1O94874 794 aa3.24□□□□□ -1.89
CSN3-201ENST00000304954 PCCBP05166 539 aa3.24□□□□□ -1.89
CSN3-201ENST00000304954 EPB41P11171 864 aaKnown RBP3.24□□□□□ -1.89
CSN3-201ENST00000304954 DESP17661 470 aa3.24□□□□□ -1.89
CSN3-201ENST00000304954 AQP1P29972 269 aa3.24□□□□□ -1.89
CSN3-201ENST00000304954 CHI3L1P36222 383 aaPredicted RBP3.24□□□□□ -1.89
CSN3-201ENST00000304954 ACAA2P42765 397 aaKnown RBP3.24□□□□□ -1.89
CSN3-201ENST00000304954 TNNT2P45379 298 aaPredicted RBP3.24□□□□□ -1.89
CSN3-201ENST00000304954 TDO2P48775 406 aa3.24□□□□□ -1.89
CSN3-201ENST00000304954 GTF3C1Q12789 2109 aa3.24□□□□□ -1.89
CSN3-201ENST00000304954 HERPUD1Q15011 391 aa3.24□□□□□ -1.89
CSN3-201ENST00000304954 MPPED2Q15777 294 aa3.24□□□□□ -1.89
CSN3-201ENST00000304954 C11orf71Q6IPW1 123 aa3.24□□□□□ -1.89
CSN3-201ENST00000304954 LINC01561Q8N1V8 128 aa3.24□□□□□ -1.89
CSN3-201ENST00000304954 C4orf36Q96KX1 117 aa3.24□□□□□ -1.89
CSN3-201ENST00000304954 LINC00167Q96N53 147 aa3.24□□□□□ -1.89
CSN3-201ENST00000304954 NIPSNAP3BQ9BS92 247 aa3.24□□□□□ -1.89
CSN3-201ENST00000304954 TMEM117Q9H0C3 514 aa3.24□□□□□ -1.89
CSN3-201ENST00000304954 SLC25A22Q9H936 323 aa3.24□□□□□ -1.89
CSN3-201ENST00000304954 EPS15L1Q9UBC2 864 aa3.24□□□□□ -1.89
CSN3-201ENST00000304954 PHF11Q9UIL8 331 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms