RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 J3QRE1 110 aa17.83■□□□□ 0.45
HOXC4-201ENST00000303406 LAMTOR5O43504 91 aa17.83■□□□□ 0.45
HOXC4-201ENST00000303406 UTS2O95399 124 aa17.83■□□□□ 0.45
HOXC4-201ENST00000303406 ONECUT2O95948 504 aa17.83■□□□□ 0.45
HOXC4-201ENST00000303406 NGFRP08138 427 aa17.83■□□□□ 0.45
HOXC4-201ENST00000303406 PNMTP11086 282 aa17.83■□□□□ 0.45
HOXC4-201ENST00000303406 UBL4AP11441 157 aa17.83■□□□□ 0.45
HOXC4-201ENST00000303406 IDUAP35475 653 aa17.83■□□□□ 0.45
HOXC4-201ENST00000303406 SLC1A3P43003 542 aa17.83■□□□□ 0.45
HOXC4-201ENST00000303406 CRYBB2P43320 205 aa17.83■□□□□ 0.45
HOXC4-201ENST00000303406 HLA-BQ31612 363 aa17.83■□□□□ 0.45
HOXC4-201ENST00000303406 PRAMEF17Q5VTA0 474 aa17.83■□□□□ 0.45
HOXC4-201ENST00000303406 WBP2NLQ6ICG8 309 aa17.83■□□□□ 0.45
HOXC4-201ENST00000303406 ARHGAP11AQ6P4F7 1023 aa17.83■□□□□ 0.45
HOXC4-201ENST00000303406 ZNF574Q6ZN55 896 aaPredicted RBP17.83■□□□□ 0.45
HOXC4-201ENST00000303406 MEPCEQ7L2J0 689 aaKnown RBP17.83■□□□□ 0.45
HOXC4-201ENST00000303406 GATAD2AQ86YP4 633 aa17.83■□□□□ 0.45
HOXC4-201ENST00000303406 CPOQ8IVL8 374 aa17.83■□□□□ 0.45
HOXC4-201ENST00000303406 CACTIN-AS1Q8N1I8 211 aa17.83■□□□□ 0.45
HOXC4-201ENST00000303406 CADM2Q8N3J6 435 aa17.83■□□□□ 0.45
HOXC4-201ENST00000303406 ZNF485Q8NCK3 441 aa17.83■□□□□ 0.45
HOXC4-201ENST00000303406 OR1N1Q8NGS0 311 aa17.83■□□□□ 0.45
HOXC4-201ENST00000303406 C3orf49Q96BT1 292 aa17.83■□□□□ 0.45
HOXC4-201ENST00000303406 EFHD2Q96C19 240 aaPredicted RBP17.83■□□□□ 0.45
HOXC4-201ENST00000303406 HSPBAP1Q96EW2 488 aa17.83■□□□□ 0.45
HOXC4-201ENST00000303406 ARHGAP9Q9BRR9 750 aa17.83■□□□□ 0.45
HOXC4-201ENST00000303406 IFT27Q9BW83 186 aa17.83■□□□□ 0.45
HOXC4-201ENST00000303406 VN1R1Q9GZP7 353 aa17.83■□□□□ 0.45
HOXC4-201ENST00000303406 COPS7AQ9UBW8 275 aa17.83■□□□□ 0.45
HOXC4-201ENST00000303406 CORINQ9Y5Q5 1042 aa17.83■□□□□ 0.45
HOXC4-201ENST00000303406 A0A1W2PQD3 144 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 SLC22A31A6NKX4 558 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 A8MUA0 341 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 SLC2A10O95528 541 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 HPGDP15428 266 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 HK1P19367 917 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 SOX6P35712 828 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 SLC6A8P48029 635 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 EFNA3P52797 238 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 CRYZQ08257 329 aaKnown RBP17.82■□□□□ 0.44
HOXC4-201ENST00000303406 SIGLEC14Q08ET2 396 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 SKP2Q13309 424 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 FHL1Q13642 323 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 NSDHLQ15738 373 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 VWA2Q5GFL6 755 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 PERM1Q5SV97 790 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 HLA-DQA1Q5Y7H0 255 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 GUSBP11Q6P575 273 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 THSD4Q6ZMP0 1018 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 COX15Q7KZN9 410 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 OAFQ86UD1 273 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 ZBTB46Q86UZ6 589 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 TMCO5AQ8N6Q1 288 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 TMEM43Q9BTV4 400 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 CDADC1Q9BWV3 514 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 MCCC2Q9HCC0 563 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 INPP5EQ9NRR6 644 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 SSR3Q9UNL2 185 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 CARD8Q9Y2G2 431 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 EYSQ5T1H1 3165 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 CACNA1EQ15878 2313 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 A0A075B6Q4 140 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 RIIAD1A6NNX1 92 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 TAF4O00268 1085 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 SIGLEC6O43699 453 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 NDUFB2O95178 105 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 IFNGP01579 166 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 PEPDP12955 493 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 FUT1P19526 365 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 SOX3P41225 446 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 ISXQ2M1V0 245 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 ANKDD1AQ495B1 522 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 Q6ZNX1 250 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 NUP54Q7Z3B4 507 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 IGFN1Q86VF2 1251 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 LAPTM4BQ86VI4 370 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 KLHL36Q8N4N3 616 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 ZNF441Q8N8Z8 693 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 LIPHQ8WWY8 451 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 UFD1Q92890 307 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 ZC3H10Q96K80 434 aaKnown RBP17.82■□□□□ 0.44
HOXC4-201ENST00000303406 ZNF649Q9BS31 505 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 LAT2Q9GZY6 243 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 LRRN3Q9H3W5 708 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 TNFRSF10DQ9UBN6 386 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 IL20RAQ9UHF4 553 aa17.82■□□□□ 0.44
HOXC4-201ENST00000303406 A0A1W2PQM1 296 aa17.81■□□□□ 0.44
HOXC4-201ENST00000303406 PRR23D1E9PI22 279 aaPredicted RBP17.81■□□□□ 0.44
HOXC4-201ENST00000303406 ZNF670-ZNF695F2Z2N8 137 aa17.81■□□□□ 0.44
HOXC4-201ENST00000303406 J3QRK9 145 aa17.81■□□□□ 0.44
HOXC4-201ENST00000303406 SOCS6O14544 535 aa17.81■□□□□ 0.44
HOXC4-201ENST00000303406 ZNF264O43296 627 aa17.81■□□□□ 0.44
HOXC4-201ENST00000303406 TSPAN2O60636 221 aa17.81■□□□□ 0.44
HOXC4-201ENST00000303406 TSPAN19P0C672 248 aa17.81■□□□□ 0.44
HOXC4-201ENST00000303406 PRR23D2P0DMB1 279 aaPredicted RBP17.81■□□□□ 0.44
HOXC4-201ENST00000303406 BMP4P12644 408 aa17.81■□□□□ 0.44
HOXC4-201ENST00000303406 ZNF3P17036 446 aa17.81■□□□□ 0.44
HOXC4-201ENST00000303406 PTNP21246 168 aa17.81■□□□□ 0.44
HOXC4-201ENST00000303406 PAICSP22234 425 aaKnown RBP17.81■□□□□ 0.44
HOXC4-201ENST00000303406 CCL7P80098 99 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms