RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 ERVK-25P63136 954 aa13.08□□□□□ -0.32
SDC2-201ENST00000302190 GDF7Q7Z4P5 450 aa13.08□□□□□ -0.32
SDC2-201ENST00000302190 GID4Q8IVV7 300 aa13.08□□□□□ -0.32
SDC2-201ENST00000302190 SETD6Q8TBK2 473 aa13.08□□□□□ -0.32
SDC2-201ENST00000302190 SMPDL3BQ92485 455 aa13.08□□□□□ -0.32
SDC2-201ENST00000302190 GHSRQ92847 366 aa13.08□□□□□ -0.32
SDC2-201ENST00000302190 ELP4Q96EB1 424 aa13.08□□□□□ -0.32
SDC2-201ENST00000302190 SRRQ9GZT4 340 aa13.08□□□□□ -0.32
SDC2-201ENST00000302190 TMEM168Q9H0V1 697 aa13.08□□□□□ -0.32
SDC2-201ENST00000302190 RBFOX1Q9NWB1 397 aaKnown RBP13.08□□□□□ -0.32
SDC2-201ENST00000302190 CDH10Q9Y6N8 788 aa13.08□□□□□ -0.32
SDC2-201ENST00000302190 H7C1C5 153 aa13.07□□□□□ -0.32
SDC2-201ENST00000302190 KLF8O95600 359 aaPredicted RBP13.07□□□□□ -0.32
SDC2-201ENST00000302190 ELK1P19419 428 aa13.07□□□□□ -0.32
SDC2-201ENST00000302190 GNALP38405 381 aa13.07□□□□□ -0.32
SDC2-201ENST00000302190 EPHA5P54756 1037 aa13.07□□□□□ -0.32
SDC2-201ENST00000302190 LCN6P62502 163 aa13.07□□□□□ -0.32
SDC2-201ENST00000302190 AGERQ15109 404 aa13.07□□□□□ -0.32
SDC2-201ENST00000302190 ABHD17CQ6PCB6 329 aa13.07□□□□□ -0.32
SDC2-201ENST00000302190 CHRDL2Q6WN34 429 aa13.07□□□□□ -0.32
SDC2-201ENST00000302190 ZNF793Q6ZN11 406 aa13.07□□□□□ -0.32
SDC2-201ENST00000302190 KCTD20Q7Z5Y7 419 aa13.07□□□□□ -0.32
SDC2-201ENST00000302190 PRR22Q8IZ63 422 aa13.07□□□□□ -0.32
SDC2-201ENST00000302190 OR2L3Q8NG85 312 aa13.07□□□□□ -0.32
SDC2-201ENST00000302190 SLC22A18Q96BI1 424 aa13.07□□□□□ -0.32
SDC2-201ENST00000302190 MMABQ96EY8 250 aaPredicted RBP13.07□□□□□ -0.32
SDC2-201ENST00000302190 A4GALTQ9NPC4 353 aa13.07□□□□□ -0.32
SDC2-201ENST00000302190 ACSS1Q9NUB1 689 aaPredicted RBP13.07□□□□□ -0.32
SDC2-201ENST00000302190 SIDT1Q9NXL6 827 aaKnown RBP13.07□□□□□ -0.32
SDC2-201ENST00000302190 A4GNTQ9UNA3 340 aa13.07□□□□□ -0.32
SDC2-201ENST00000302190 FARSAQ9Y285 508 aaKnown RBP13.07□□□□□ -0.32
SDC2-201ENST00000302190 SLC22A31A6NKX4 558 aa13.07□□□□□ -0.32
SDC2-201ENST00000302190 H2AFB2P0C5Z0 115 aa13.07□□□□□ -0.32
SDC2-201ENST00000302190 SLC6A6P31641 620 aa13.07□□□□□ -0.32
SDC2-201ENST00000302190 OR1Q1Q15612 314 aa13.07□□□□□ -0.32
SDC2-201ENST00000302190 DUSP5Q16690 384 aa13.07□□□□□ -0.32
SDC2-201ENST00000302190 ZNF767PQ75MW2 155 aa13.07□□□□□ -0.32
SDC2-201ENST00000302190 BOLLQ8N9W6 283 aaKnown RBP13.07□□□□□ -0.32
SDC2-201ENST00000302190 GPA33Q99795 319 aa13.07□□□□□ -0.32
SDC2-201ENST00000302190 TRIM2Q9C040 744 aa13.07□□□□□ -0.32
SDC2-201ENST00000302190 OR52A5Q9H2C5 316 aa13.07□□□□□ -0.32
SDC2-201ENST00000302190 A0A0A6YYC8 382 aaPredicted RBP13.07□□□□□ -0.32
SDC2-201ENST00000302190 CDC14CA4D256 554 aa13.07□□□□□ -0.32
SDC2-201ENST00000302190 POM121BA6NF01 834 aa13.07□□□□□ -0.32
SDC2-201ENST00000302190 I3L1I5 382 aaPredicted RBP13.07□□□□□ -0.32
SDC2-201ENST00000302190 GJA4P35212 333 aa13.07□□□□□ -0.32
SDC2-201ENST00000302190 CRYBB2P43320 205 aa13.07□□□□□ -0.32
SDC2-201ENST00000302190 PSMD4P55036 377 aaKnown RBP13.07□□□□□ -0.32
SDC2-201ENST00000302190 SNRPGP62308 76 aaKnown RBP13.07□□□□□ -0.32
SDC2-201ENST00000302190 LYPD4Q6UWN0 246 aa13.07□□□□□ -0.32
SDC2-201ENST00000302190 SAMD14Q8IZD0 417 aaPredicted RBP13.07□□□□□ -0.32
SDC2-201ENST00000302190 OR4C15Q8NGM1 316 aa13.07□□□□□ -0.32
SDC2-201ENST00000302190 FGF22Q9HCT0 170 aa13.07□□□□□ -0.32
SDC2-201ENST00000302190 NPAP1Q9NZP6 1156 aa13.07□□□□□ -0.32
SDC2-201ENST00000302190 PCYT1BQ9Y5K3 369 aaPredicted RBP13.07□□□□□ -0.32
SDC2-201ENST00000302190 SLC9B1P1A6NJY1 282 aa13.06□□□□□ -0.32
SDC2-201ENST00000302190 AGAP14A8MT82 685 aa13.06□□□□□ -0.32
SDC2-201ENST00000302190 LGI1O95970 557 aa13.06□□□□□ -0.32
SDC2-201ENST00000302190 C4BPBP20851 252 aa13.06□□□□□ -0.32
SDC2-201ENST00000302190 GARNL3Q5VVW2 1013 aa13.06□□□□□ -0.32
SDC2-201ENST00000302190 ZNF782Q6ZMW2 699 aaPredicted RBP13.06□□□□□ -0.32
SDC2-201ENST00000302190 CSNK1A1LQ8N752 337 aa13.06□□□□□ -0.32
SDC2-201ENST00000302190 NSMAFQ92636 917 aa13.06□□□□□ -0.32
SDC2-201ENST00000302190 NDUFB11Q9NX14 153 aa13.06□□□□□ -0.32
SDC2-201ENST00000302190 SERGEFQ9UGK8 458 aa13.06□□□□□ -0.32
SDC2-201ENST00000302190 ZNF443Q9Y2A4 671 aaPredicted RBP13.06□□□□□ -0.32
SDC2-201ENST00000302190 NAALAD2Q9Y3Q0 740 aa13.06□□□□□ -0.32
SDC2-201ENST00000302190 GBF1Q92538 1859 aa13.06□□□□□ -0.32
SDC2-201ENST00000302190 TEX51A0A1B0GUA7 166 aa13.06□□□□□ -0.32
SDC2-201ENST00000302190 H3BQ06 376 aaPredicted RBP13.06□□□□□ -0.32
SDC2-201ENST00000302190 L7N2F9 121 aa13.06□□□□□ -0.32
SDC2-201ENST00000302190 M0R233 179 aa13.06□□□□□ -0.32
SDC2-201ENST00000302190 HRGP04196 525 aa13.06□□□□□ -0.32
SDC2-201ENST00000302190 LIPCP11150 499 aa13.06□□□□□ -0.32
SDC2-201ENST00000302190 TMEM69Q5SWH9 247 aa13.06□□□□□ -0.32
SDC2-201ENST00000302190 JAGN1Q8N5M9 183 aa13.06□□□□□ -0.32
SDC2-201ENST00000302190 GALNT11Q8NCW6 608 aa13.06□□□□□ -0.32
SDC2-201ENST00000302190 C5orf34Q96MH7 638 aa13.06□□□□□ -0.32
SDC2-201ENST00000302190 NKX3-1Q99801 234 aaPredicted RBP13.06□□□□□ -0.32
SDC2-201ENST00000302190 MGAT4CQ9UBM8 478 aa13.06□□□□□ -0.32
SDC2-201ENST00000302190 TBC1D24Q9ULP9 559 aa13.06□□□□□ -0.32
SDC2-201ENST00000302190 DOCK4Q8N1I0 1966 aa13.06□□□□□ -0.32
SDC2-201ENST00000302190 C17orf113A0A1B0GUU1 675 aa13.06□□□□□ -0.32
SDC2-201ENST00000302190 SLC19A2O60779 497 aa13.06□□□□□ -0.32
SDC2-201ENST00000302190 PDGFAP04085 211 aa13.06□□□□□ -0.32
SDC2-201ENST00000302190 NAGAP17050 411 aa13.06□□□□□ -0.32
SDC2-201ENST00000302190 STARP49675 285 aa13.06□□□□□ -0.32
SDC2-201ENST00000302190 FAPQ12884 760 aa13.06□□□□□ -0.32
SDC2-201ENST00000302190 ZNF77Q15935 545 aa13.06□□□□□ -0.32
SDC2-201ENST00000302190 C3orf38Q5JPI3 329 aa13.06□□□□□ -0.32
SDC2-201ENST00000302190 TOR2AQ5JU69 321 aa13.06□□□□□ -0.32
SDC2-201ENST00000302190 METRNLQ641Q3 311 aa13.06□□□□□ -0.32
SDC2-201ENST00000302190 TMEM64Q6YI46 380 aa13.06□□□□□ -0.32
SDC2-201ENST00000302190 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.06□□□□□ -0.32
SDC2-201ENST00000302190 ST6GAL2Q96JF0 529 aa13.06□□□□□ -0.32
SDC2-201ENST00000302190 MS4A4EQ96PG1 132 aa13.06□□□□□ -0.32
SDC2-201ENST00000302190 LMF1Q96S06 567 aa13.06□□□□□ -0.32
SDC2-201ENST00000302190 FBXL4Q9UKA2 621 aa13.06□□□□□ -0.32
SDC2-201ENST00000302190 PATJQ8NI35 1801 aa13.06□□□□□ -0.32
SDC2-201ENST00000302190 F13BP05160 661 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms