RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 DECR1Q16698 335 aa20.27■□□□□ 0.83
TPM4-201ENST00000300933 NDUFAF6Q330K2 333 aa20.27■□□□□ 0.83
TPM4-201ENST00000300933 RASSF6Q6ZTQ3 369 aa20.27■□□□□ 0.83
TPM4-201ENST00000300933 MBOAT2Q6ZWT7 520 aa20.27■□□□□ 0.83
TPM4-201ENST00000300933 PHC2Q8IXK0 858 aa20.27■□□□□ 0.83
TPM4-201ENST00000300933 TCTE3Q8IZS6 198 aa20.27■□□□□ 0.83
TPM4-201ENST00000300933 ZNF687Q8N1G0 1237 aa20.27■□□□□ 0.83
TPM4-201ENST00000300933 CTHRC1Q96CG8 243 aa20.27■□□□□ 0.83
TPM4-201ENST00000300933 PLEKHB1Q9UF11 243 aaPredicted RBP20.27■□□□□ 0.83
TPM4-201ENST00000300933 SATB2Q9UPW6 733 aa20.27■□□□□ 0.83
TPM4-201ENST00000300933 CDHR4A6H8M9 788 aa20.26■□□□□ 0.83
TPM4-201ENST00000300933 SDC2P34741 201 aa20.26■□□□□ 0.83
TPM4-201ENST00000300933 SPERTQ8NA61 448 aa20.26■□□□□ 0.83
TPM4-201ENST00000300933 RIT1Q92963 219 aa20.26■□□□□ 0.83
TPM4-201ENST00000300933 HSPA12BQ96MM6 686 aa20.26■□□□□ 0.83
TPM4-201ENST00000300933 DHRS9Q9BPW9 319 aa20.26■□□□□ 0.83
TPM4-201ENST00000300933 SPRTNQ9H040 489 aaPredicted RBP20.26■□□□□ 0.83
TPM4-201ENST00000300933 NARFLQ9H6Q4 476 aa20.26■□□□□ 0.83
TPM4-201ENST00000300933 DUSP22Q9NRW4 184 aa20.26■□□□□ 0.83
TPM4-201ENST00000300933 COMMD3Q9UBI1 195 aa20.26■□□□□ 0.83
TPM4-201ENST00000300933 TESQ9UGI8 421 aaKnown RBP20.26■□□□□ 0.83
TPM4-201ENST00000300933 RP1P56715 2156 aa20.26■□□□□ 0.83
TPM4-201ENST00000300933 S1PR1P21453 382 aa20.26■□□□□ 0.83
TPM4-201ENST00000300933 EMDP50402 254 aa20.26■□□□□ 0.83
TPM4-201ENST00000300933 SYT14Q8NB59 555 aa20.26■□□□□ 0.83
TPM4-201ENST00000300933 MCUBQ9NWR8 336 aa20.26■□□□□ 0.83
TPM4-201ENST00000300933 NDUFB11Q9NX14 153 aa20.26■□□□□ 0.83
TPM4-201ENST00000300933 A0A087WV62 115 aa20.25■□□□□ 0.83
TPM4-201ENST00000300933 OR5F1O95221 314 aa20.25■□□□□ 0.83
TPM4-201ENST00000300933 GAS1P54826 345 aa20.25■□□□□ 0.83
TPM4-201ENST00000300933 FAM53BQ14153 422 aa20.25■□□□□ 0.83
TPM4-201ENST00000300933 DDI2Q5TDH0 399 aa20.25■□□□□ 0.83
TPM4-201ENST00000300933 MEDAGQ5VYS4 303 aa20.25■□□□□ 0.83
TPM4-201ENST00000300933 GDPD1Q8N9F7 314 aa20.25■□□□□ 0.83
TPM4-201ENST00000300933 POGLUT1Q8NBL1 392 aa20.25■□□□□ 0.83
TPM4-201ENST00000300933 MND1Q9BWT6 205 aa20.25■□□□□ 0.83
TPM4-201ENST00000300933 SLC2A4RGQ9NR83 387 aa20.25■□□□□ 0.83
TPM4-201ENST00000300933 METTL12A8MUP2 240 aa20.25■□□□□ 0.83
TPM4-201ENST00000300933 POLR1CO15160 346 aaPredicted RBP20.25■□□□□ 0.83
TPM4-201ENST00000300933 SCO1O75880 301 aa20.25■□□□□ 0.83
TPM4-201ENST00000300933 DBIP07108 87 aaKnown RBP20.25■□□□□ 0.83
TPM4-201ENST00000300933 ZGLP1P0C6A0 271 aa20.25■□□□□ 0.83
TPM4-201ENST00000300933 SLC35E2P0CK97 266 aa20.25■□□□□ 0.83
TPM4-201ENST00000300933 HLA-DMAP28067 261 aa20.25■□□□□ 0.83
TPM4-201ENST00000300933 MTNR1AP48039 350 aa20.25■□□□□ 0.83
TPM4-201ENST00000300933 BNC1Q01954 994 aa20.25■□□□□ 0.83
TPM4-201ENST00000300933 ELOCQ15369 112 aa20.25■□□□□ 0.83
TPM4-201ENST00000300933 MANEAQ5SRI9 462 aa20.25■□□□□ 0.83
TPM4-201ENST00000300933 LCN1P1Q5VSP4 162 aa20.25■□□□□ 0.83
TPM4-201ENST00000300933 RANBP3LQ86VV4 465 aaPredicted RBP20.25■□□□□ 0.83
TPM4-201ENST00000300933 PLCZ1Q86YW0 608 aa20.25■□□□□ 0.83
TPM4-201ENST00000300933 C19orf18Q8NEA5 215 aa20.25■□□□□ 0.83
TPM4-201ENST00000300933 TM9SF4Q92544 642 aa20.25■□□□□ 0.83
TPM4-201ENST00000300933 SLC38A2Q96QD8 506 aa20.25■□□□□ 0.83
TPM4-201ENST00000300933 SPIN1Q9Y657 262 aaPredicted RBP20.25■□□□□ 0.83
TPM4-201ENST00000300933 A0A1W2PR77 199 aa20.24■□□□□ 0.83
TPM4-201ENST00000300933 SOCS6O14544 535 aa20.24■□□□□ 0.83
TPM4-201ENST00000300933 BRINP1O60477 761 aa20.24■□□□□ 0.83
TPM4-201ENST00000300933 RFPL3O75679 317 aa20.24■□□□□ 0.83
TPM4-201ENST00000300933 RAB36O95755 333 aa20.24■□□□□ 0.83
TPM4-201ENST00000300933 CD27P26842 260 aa20.24■□□□□ 0.83
TPM4-201ENST00000300933 MAP2K3P46734 347 aa20.24■□□□□ 0.83
TPM4-201ENST00000300933 CAPZBP47756 277 aa20.24■□□□□ 0.83
TPM4-201ENST00000300933 PRTGQ2VWP7 1150 aa20.24■□□□□ 0.83
TPM4-201ENST00000300933 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.24■□□□□ 0.83
TPM4-201ENST00000300933 ZNF620Q6ZNG0 422 aa20.24■□□□□ 0.83
TPM4-201ENST00000300933 LMF1Q96S06 567 aa20.24■□□□□ 0.83
TPM4-201ENST00000300933 NELL2Q99435 816 aa20.24■□□□□ 0.83
TPM4-201ENST00000300933 COQ3Q9NZJ6 369 aa20.24■□□□□ 0.83
TPM4-201ENST00000300933 SLC23A1Q9UHI7 598 aa20.24■□□□□ 0.83
TPM4-201ENST00000300933 SLC2A2P11168 524 aaPredicted RBP20.24■□□□□ 0.83
TPM4-201ENST00000300933 NME1P15531 152 aaKnown RBP20.24■□□□□ 0.83
TPM4-201ENST00000300933 POU3F3P20264 500 aaPredicted RBP20.24■□□□□ 0.83
TPM4-201ENST00000300933 FPR3P25089 353 aa20.24■□□□□ 0.83
TPM4-201ENST00000300933 GCGRP47871 477 aa20.24■□□□□ 0.83
TPM4-201ENST00000300933 FXYD6P3P58550 94 aa20.24■□□□□ 0.83
TPM4-201ENST00000300933 SLC36A4Q6YBV0 504 aa20.24■□□□□ 0.83
TPM4-201ENST00000300933 GDPGP1Q6ZNW5 385 aa20.24■□□□□ 0.83
TPM4-201ENST00000300933 BPHLQ86WA6 291 aaPredicted RBP20.24■□□□□ 0.83
TPM4-201ENST00000300933 FAM181AQ8N9Y4 354 aa20.24■□□□□ 0.83
TPM4-201ENST00000300933 OR51A7Q8NH64 312 aa20.24■□□□□ 0.83
TPM4-201ENST00000300933 OMA1Q96E52 524 aa20.24■□□□□ 0.83
TPM4-201ENST00000300933 RACGAP1Q9H0H5 632 aa20.24■□□□□ 0.83
TPM4-201ENST00000300933 IL20Q9NYY1 176 aa20.24■□□□□ 0.83
TPM4-201ENST00000300933 KLHL21Q9UJP4 597 aa20.24■□□□□ 0.83
TPM4-201ENST00000300933 TRAPPC13A5PLN9 417 aa20.23■□□□□ 0.83
TPM4-201ENST00000300933 ZNF217O75362 1048 aa20.23■□□□□ 0.83
TPM4-201ENST00000300933 C1QBP02746 253 aa20.23■□□□□ 0.83
TPM4-201ENST00000300933 IFNA16P05015 189 aa20.23■□□□□ 0.83
TPM4-201ENST00000300933 BMP8BP34820 402 aa20.23■□□□□ 0.83
TPM4-201ENST00000300933 MAP3K8P41279 467 aa20.23■□□□□ 0.83
TPM4-201ENST00000300933 CDH11P55287 796 aa20.23■□□□□ 0.83
TPM4-201ENST00000300933 AMZ1Q400G9 498 aa20.23■□□□□ 0.83
TPM4-201ENST00000300933 TRIQKQ629K1 86 aa20.23■□□□□ 0.83
TPM4-201ENST00000300933 LAMTOR1Q6IAA8 161 aa20.23■□□□□ 0.83
TPM4-201ENST00000300933 CPOQ8IVL8 374 aa20.23■□□□□ 0.83
TPM4-201ENST00000300933 FOLH1BQ9HBA9 442 aa20.23■□□□□ 0.83
TPM4-201ENST00000300933 ERVK-19Q9WJR5 959 aa20.23■□□□□ 0.83
TPM4-201ENST00000300933 ALPK2Q86TB3 2170 aa20.23■□□□□ 0.83
TPM4-201ENST00000300933 HEATR5AQ86XA9 2040 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms