RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 EHFQ9NZC4 300 aa13.97□□□□□ -0.17
SCN3B-201ENST00000299333 URGCP-MRPS24S4R325 110 aa13.97□□□□□ -0.17
SCN3B-201ENST00000299333 SPEF2Q9C093 1822 aa13.97□□□□□ -0.17
SCN3B-201ENST00000299333 GPR85P60893 370 aa13.97□□□□□ -0.17
SCN3B-201ENST00000299333 WDR5P61964 334 aaKnown RBP13.97□□□□□ -0.17
SCN3B-201ENST00000299333 SLC22A6Q4U2R8 563 aa13.97□□□□□ -0.17
SCN3B-201ENST00000299333 GKN2Q86XP6 184 aa13.97□□□□□ -0.17
SCN3B-201ENST00000299333 ZNF689Q96CS4 500 aaPredicted RBP13.97□□□□□ -0.17
SCN3B-201ENST00000299333 C20orf24Q9BUV8 137 aa13.97□□□□□ -0.17
SCN3B-201ENST00000299333 HIF1ANQ9NWT6 349 aa13.97□□□□□ -0.17
SCN3B-201ENST00000299333 BABAM2Q9NXR7 383 aa13.97□□□□□ -0.17
SCN3B-201ENST00000299333 POMT1Q9Y6A1 747 aa13.97□□□□□ -0.17
SCN3B-201ENST00000299333 FAM183AA6NL82 134 aa13.96□□□□□ -0.17
SCN3B-201ENST00000299333 F5H5K5 113 aa13.96□□□□□ -0.17
SCN3B-201ENST00000299333 F10P00742 488 aa13.96□□□□□ -0.17
SCN3B-201ENST00000299333 HAPLN1P10915 354 aaPredicted RBP13.96□□□□□ -0.17
SCN3B-201ENST00000299333 COL13A1Q5TAT6 717 aaPredicted RBP13.96□□□□□ -0.17
SCN3B-201ENST00000299333 GAREM2Q75VX8 874 aa13.96□□□□□ -0.17
SCN3B-201ENST00000299333 TMEM130Q8N3G9 435 aa13.96□□□□□ -0.17
SCN3B-201ENST00000299333 MIB2Q96AX9 1013 aa13.96□□□□□ -0.17
SCN3B-201ENST00000299333 ELF4Q99607 663 aaPredicted RBP13.96□□□□□ -0.17
SCN3B-201ENST00000299333 VSX1Q9NZR4 365 aaPredicted RBP13.96□□□□□ -0.17
SCN3B-201ENST00000299333 ENSAO43768 121 aaKnown RBP13.96□□□□□ -0.17
SCN3B-201ENST00000299333 LCATP04180 440 aa13.96□□□□□ -0.17
SCN3B-201ENST00000299333 SNRPBP14678 240 aaKnown RBP13.96□□□□□ -0.17
SCN3B-201ENST00000299333 TAGLN2P37802 199 aaKnown RBP13.96□□□□□ -0.17
SCN3B-201ENST00000299333 VEZF1Q14119 521 aa13.96□□□□□ -0.17
SCN3B-201ENST00000299333 ADGRF3Q8IZF5 1079 aa13.96□□□□□ -0.17
SCN3B-201ENST00000299333 NLGN4XQ8N0W4 816 aa13.96□□□□□ -0.17
SCN3B-201ENST00000299333 OR4K15Q8NH41 348 aa13.96□□□□□ -0.17
SCN3B-201ENST00000299333 SLC2A13Q96QE2 648 aa13.96□□□□□ -0.17
SCN3B-201ENST00000299333 C11orf54Q9H0W9 315 aaPredicted RBP13.96□□□□□ -0.17
SCN3B-201ENST00000299333 CPNE7Q9UBL6 633 aa13.96□□□□□ -0.17
SCN3B-201ENST00000299333 YKT6O15498 198 aa13.96□□□□□ -0.17
SCN3B-201ENST00000299333 SEC14L5O43304 696 aa13.96□□□□□ -0.17
SCN3B-201ENST00000299333 GPR137BO60478 399 aa13.96□□□□□ -0.17
SCN3B-201ENST00000299333 FABP1P07148 127 aa13.96□□□□□ -0.17
SCN3B-201ENST00000299333 GDNFP39905 211 aa13.96□□□□□ -0.17
SCN3B-201ENST00000299333 STK19P49842 368 aaPredicted RBP13.96□□□□□ -0.17
SCN3B-201ENST00000299333 GRB2P62993 217 aaKnown RBP13.96□□□□□ -0.17
SCN3B-201ENST00000299333 PLGLAQ15195 96 aa13.96□□□□□ -0.17
SCN3B-201ENST00000299333 DEFB119Q8N690 84 aa13.96□□□□□ -0.17
SCN3B-201ENST00000299333 CELF5Q8N6W0 485 aaKnown RBP13.96□□□□□ -0.17
SCN3B-201ENST00000299333 ZBTB44Q8NCP5 570 aa13.96□□□□□ -0.17
SCN3B-201ENST00000299333 LMO3Q8TAP4 145 aa13.96□□□□□ -0.17
SCN3B-201ENST00000299333 ZFAND1Q8TCF1 268 aa13.96□□□□□ -0.17
SCN3B-201ENST00000299333 TMEM239Q8WW34 195 aa13.96□□□□□ -0.17
SCN3B-201ENST00000299333 IGKV6D-41A0A0C4DH26 115 aa13.96□□□□□ -0.18
SCN3B-201ENST00000299333 CEBPZOSA8MTT3 80 aa13.96□□□□□ -0.18
SCN3B-201ENST00000299333 ALX3O95076 343 aa13.96□□□□□ -0.18
SCN3B-201ENST00000299333 PSMB1P20618 241 aaKnown RBP13.96□□□□□ -0.18
SCN3B-201ENST00000299333 RNF212Q495C1 297 aa13.96□□□□□ -0.18
SCN3B-201ENST00000299333 EXOSC6Q5RKV6 272 aaKnown RBP13.96□□□□□ -0.18
SCN3B-201ENST00000299333 Q6ZPB1 254 aaPredicted RBP13.96□□□□□ -0.18
SCN3B-201ENST00000299333 OR6V1Q8N148 313 aa13.96□□□□□ -0.18
SCN3B-201ENST00000299333 IGSF8Q969P0 613 aa13.96□□□□□ -0.18
SCN3B-201ENST00000299333 GORASP2Q9H8Y8 452 aa13.96□□□□□ -0.18
SCN3B-201ENST00000299333 BTNL2Q9UIR0 455 aa13.96□□□□□ -0.18
SCN3B-201ENST00000299333 RPH3ALQ9UNE2 315 aa13.96□□□□□ -0.18
SCN3B-201ENST00000299333 ARHGAP33O14559 1287 aa13.95□□□□□ -0.18
SCN3B-201ENST00000299333 FAM163BP0C2L3 166 aa13.95□□□□□ -0.18
SCN3B-201ENST00000299333 TMEM35AQ53FP2 167 aa13.95□□□□□ -0.18
SCN3B-201ENST00000299333 ZNF836Q6ZNA1 936 aa13.95□□□□□ -0.18
SCN3B-201ENST00000299333 KLHDC8AQ8IYD2 350 aa13.95□□□□□ -0.18
SCN3B-201ENST00000299333 TMEM163Q8TC26 289 aa13.95□□□□□ -0.18
SCN3B-201ENST00000299333 IL1F10Q8WWZ1 152 aa13.95□□□□□ -0.18
SCN3B-201ENST00000299333 CORO2AQ92828 525 aa13.95□□□□□ -0.18
SCN3B-201ENST00000299333 ZNF160Q9HCG1 818 aa13.95□□□□□ -0.18
SCN3B-201ENST00000299333 MSTNO14793 375 aa13.95□□□□□ -0.18
SCN3B-201ENST00000299333 FUT1P19526 365 aa13.95□□□□□ -0.18
SCN3B-201ENST00000299333 S100A11P31949 105 aa13.95□□□□□ -0.18
SCN3B-201ENST00000299333 HNRNPA3P51991 378 aaKnown RBP13.95□□□□□ -0.18
SCN3B-201ENST00000299333 RACK1P63244 317 aaKnown RBP13.95□□□□□ -0.18
SCN3B-201ENST00000299333 HOXC5Q00444 222 aa13.95□□□□□ -0.18
SCN3B-201ENST00000299333 PDZK1IP1Q13113 114 aa13.95□□□□□ -0.18
SCN3B-201ENST00000299333 WDTC1Q8N5D0 677 aa13.95□□□□□ -0.18
SCN3B-201ENST00000299333 CSNK1A1LQ8N752 337 aa13.95□□□□□ -0.18
SCN3B-201ENST00000299333 GCDHQ92947 438 aaPredicted RBP13.95□□□□□ -0.18
SCN3B-201ENST00000299333 TXNDC15Q96J42 360 aa13.95□□□□□ -0.18
SCN3B-201ENST00000299333 DEFB126Q9BYW3 111 aa13.95□□□□□ -0.18
SCN3B-201ENST00000299333 NKX6-2Q9C056 277 aaPredicted RBP13.95□□□□□ -0.18
SCN3B-201ENST00000299333 CPNE6O95741 557 aa13.95□□□□□ -0.18
SCN3B-201ENST00000299333 CD63P08962 238 aa13.95□□□□□ -0.18
SCN3B-201ENST00000299333 CNR1P21554 472 aa13.95□□□□□ -0.18
SCN3B-201ENST00000299333 B3GLCTQ6Y288 498 aa13.95□□□□□ -0.18
SCN3B-201ENST00000299333 FRMD1Q8N878 549 aa13.95□□□□□ -0.18
SCN3B-201ENST00000299333 DAZLQ92904 295 aaKnown RBP13.95□□□□□ -0.18
SCN3B-201ENST00000299333 BOCQ9BWV1 1114 aa13.95□□□□□ -0.18
SCN3B-201ENST00000299333 GAB2Q9UQC2 676 aa13.95□□□□□ -0.18
SCN3B-201ENST00000299333 MRPS17Q9Y2R5 130 aaKnown RBP13.95□□□□□ -0.18
SCN3B-201ENST00000299333 HRH2P25021 359 aa13.95□□□□□ -0.18
SCN3B-201ENST00000299333 SLC1A3P43003 542 aa13.95□□□□□ -0.18
SCN3B-201ENST00000299333 SHC2P98077 582 aa13.95□□□□□ -0.18
SCN3B-201ENST00000299333 PNPLA1Q8N8W4 532 aa13.95□□□□□ -0.18
SCN3B-201ENST00000299333 ADAMTS16Q8TE57 1224 aa13.95□□□□□ -0.18
SCN3B-201ENST00000299333 TBC1D20Q96BZ9 403 aa13.95□□□□□ -0.18
SCN3B-201ENST00000299333 DDIT4LQ96D03 193 aa13.95□□□□□ -0.18
SCN3B-201ENST00000299333 RNF170Q96K19 258 aa13.95□□□□□ -0.18
SCN3B-201ENST00000299333 ZNF582Q96NG8 517 aaPredicted RBP13.95□□□□□ -0.18
SCN3B-201ENST00000299333 RNH1P13489 461 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms