RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 IL20Q9NYY1 176 aa13.1□□□□□ -0.31
C9orf3-202ENST00000297979 DNAJC27Q9NZQ0 273 aa13.1□□□□□ -0.31
C9orf3-202ENST00000297979 RPS6KB2Q9UBS0 482 aa13.1□□□□□ -0.31
C9orf3-202ENST00000297979 TMEM5Q9Y2B1 443 aa13.1□□□□□ -0.31
C9orf3-202ENST00000297979 NOX1Q9Y5S8 564 aa13.1□□□□□ -0.31
C9orf3-202ENST00000297979 CDH10Q9Y6N8 788 aa13.1□□□□□ -0.31
C9orf3-202ENST00000297979 NCOR1O75376 2440 aa13.1□□□□□ -0.31
C9orf3-202ENST00000297979 IGHV3-20A0A0C4DH32 117 aa13.1□□□□□ -0.31
C9orf3-202ENST00000297979 LNP1A1A4G5 178 aa13.1□□□□□ -0.31
C9orf3-202ENST00000297979 CDC42EP2O14613 210 aa13.1□□□□□ -0.31
C9orf3-202ENST00000297979 PRKYO43930 277 aa13.1□□□□□ -0.31
C9orf3-202ENST00000297979 IFI30P13284 250 aa13.1□□□□□ -0.31
C9orf3-202ENST00000297979 IL12BP29460 328 aa13.1□□□□□ -0.31
C9orf3-202ENST00000297979 ADH7P40394 386 aa13.1□□□□□ -0.31
C9orf3-202ENST00000297979 OCLNQ16625 522 aa13.1□□□□□ -0.31
C9orf3-202ENST00000297979 PLA2G2CQ5R387 149 aa13.1□□□□□ -0.31
C9orf3-202ENST00000297979 FNDC7Q5VTL7 733 aa13.1□□□□□ -0.31
C9orf3-202ENST00000297979 MRGPREQ86SM8 312 aa13.1□□□□□ -0.31
C9orf3-202ENST00000297979 PRR22Q8IZ63 422 aa13.1□□□□□ -0.31
C9orf3-202ENST00000297979 CADM2Q8N3J6 435 aa13.1□□□□□ -0.31
C9orf3-202ENST00000297979 FAM71CQ8NEG0 241 aa13.1□□□□□ -0.31
C9orf3-202ENST00000297979 RHBDD1Q8TEB9 315 aa13.1□□□□□ -0.31
C9orf3-202ENST00000297979 METTL21AQ8WXB1 218 aa13.1□□□□□ -0.31
C9orf3-202ENST00000297979 C20orf141Q9NUB4 165 aa13.1□□□□□ -0.31
C9orf3-202ENST00000297979 SELENONQ9NZV5 590 aa13.1□□□□□ -0.31
C9orf3-202ENST00000297979 WARS2Q9UGM6 360 aaKnown RBP13.1□□□□□ -0.31
C9orf3-202ENST00000297979 UNC119BA6NIH7 251 aa13.09□□□□□ -0.31
C9orf3-202ENST00000297979 SAGE2PA6NJ88 616 aa13.09□□□□□ -0.31
C9orf3-202ENST00000297979 MEN1O00255 615 aa13.09□□□□□ -0.31
C9orf3-202ENST00000297979 KPNA4O00629 521 aaPredicted RBP13.09□□□□□ -0.31
C9orf3-202ENST00000297979 REM1O75628 298 aa13.09□□□□□ -0.31
C9orf3-202ENST00000297979 TBXA2RP21731 343 aa13.09□□□□□ -0.31
C9orf3-202ENST00000297979 C21orf33P30042 268 aaPredicted RBP13.09□□□□□ -0.31
C9orf3-202ENST00000297979 RBM34P42696 430 aaKnown RBP13.09□□□□□ -0.31
C9orf3-202ENST00000297979 GPR143P51810 404 aa13.09□□□□□ -0.31
C9orf3-202ENST00000297979 TMBIM6P55061 237 aa13.09□□□□□ -0.31
C9orf3-202ENST00000297979 ST3GAL4Q11206 333 aa13.09□□□□□ -0.31
C9orf3-202ENST00000297979 TBCEQ15813 527 aaPredicted RBP13.09□□□□□ -0.31
C9orf3-202ENST00000297979 SNAPC1Q16533 368 aa13.09□□□□□ -0.31
C9orf3-202ENST00000297979 CLEC12AQ5QGZ9 265 aa13.09□□□□□ -0.31
C9orf3-202ENST00000297979 CFAP161Q6P656 301 aa13.09□□□□□ -0.31
C9orf3-202ENST00000297979 ULK3Q6PHR2 472 aa13.09□□□□□ -0.31
C9orf3-202ENST00000297979 KIRREL2Q6UWL6 708 aa13.09□□□□□ -0.31
C9orf3-202ENST00000297979 CDK20Q8IZL9 346 aa13.09□□□□□ -0.31
C9orf3-202ENST00000297979 FAM26EQ8N5C1 309 aa13.09□□□□□ -0.31
C9orf3-202ENST00000297979 ZNF441Q8N8Z8 693 aa13.09□□□□□ -0.31
C9orf3-202ENST00000297979 GATSQ8NAP1 163 aa13.09□□□□□ -0.31
C9orf3-202ENST00000297979 C17orf47Q8NEP4 570 aa13.09□□□□□ -0.31
C9orf3-202ENST00000297979 FCGR1BQ92637 280 aa13.09□□□□□ -0.31
C9orf3-202ENST00000297979 COG8Q96MW5 612 aa13.09□□□□□ -0.31
C9orf3-202ENST00000297979 SLC38A2Q96QD8 506 aa13.09□□□□□ -0.31
C9orf3-202ENST00000297979 ADOQ96SZ5 270 aa13.09□□□□□ -0.31
C9orf3-202ENST00000297979 TSSK6Q9BXA6 273 aa13.09□□□□□ -0.31
C9orf3-202ENST00000297979 DPH1Q9BZG8 443 aa13.09□□□□□ -0.31
C9orf3-202ENST00000297979 NAA50Q9GZZ1 169 aaKnown RBP13.09□□□□□ -0.31
C9orf3-202ENST00000297979 SLC26A1Q9H2B4 701 aa13.09□□□□□ -0.31
C9orf3-202ENST00000297979 RXFP3Q9NSD7 469 aa13.09□□□□□ -0.31
C9orf3-202ENST00000297979 CDC14CA4D256 554 aa13.09□□□□□ -0.31
C9orf3-202ENST00000297979 H3BMQ9 156 aa13.09□□□□□ -0.31
C9orf3-202ENST00000297979 TLX2O43763 284 aaPredicted RBP13.09□□□□□ -0.31
C9orf3-202ENST00000297979 MAN1A2O60476 641 aa13.09□□□□□ -0.31
C9orf3-202ENST00000297979 STSP08842 583 aa13.09□□□□□ -0.31
C9orf3-202ENST00000297979 PIPP12273 146 aaPredicted RBP13.09□□□□□ -0.31
C9orf3-202ENST00000297979 EMP2P54851 167 aa13.09□□□□□ -0.31
C9orf3-202ENST00000297979 PLCXD2Q0VAA5 305 aa13.09□□□□□ -0.31
C9orf3-202ENST00000297979 SLC25A30Q5SVS4 291 aa13.09□□□□□ -0.31
C9orf3-202ENST00000297979 SLC34A3Q8N130 599 aa13.09□□□□□ -0.31
C9orf3-202ENST00000297979 HSPBAP1Q96EW2 488 aa13.09□□□□□ -0.31
C9orf3-202ENST00000297979 ZNF426Q9BUY5 554 aa13.09□□□□□ -0.31
C9orf3-202ENST00000297979 TEX12Q9BXU0 123 aa13.09□□□□□ -0.31
C9orf3-202ENST00000297979 VPS13AQ96RL7 3174 aa13.09□□□□□ -0.31
C9orf3-202ENST00000297979 GDF9O60383 454 aa13.08□□□□□ -0.31
C9orf3-202ENST00000297979 S100A6P06703 90 aa13.08□□□□□ -0.31
C9orf3-202ENST00000297979 MAKP20794 623 aa13.08□□□□□ -0.31
C9orf3-202ENST00000297979 PCSK6P29122 969 aa13.08□□□□□ -0.31
C9orf3-202ENST00000297979 SLC15A1P46059 708 aa13.08□□□□□ -0.31
C9orf3-202ENST00000297979 CTBP2P56545 445 aa13.08□□□□□ -0.31
C9orf3-202ENST00000297979 EFNB1P98172 346 aa13.08□□□□□ -0.31
C9orf3-202ENST00000297979 CD226Q15762 336 aa13.08□□□□□ -0.31
C9orf3-202ENST00000297979 SYT6Q5T7P8 510 aaPredicted RBP13.08□□□□□ -0.31
C9orf3-202ENST00000297979 MEDAGQ5VYS4 303 aa13.08□□□□□ -0.31
C9orf3-202ENST00000297979 LCN10Q6JVE6 187 aa13.08□□□□□ -0.31
C9orf3-202ENST00000297979 TMPRSS11FQ6ZWK6 438 aa13.08□□□□□ -0.31
C9orf3-202ENST00000297979 PHOSPHO1Q8TCT1 267 aa13.08□□□□□ -0.31
C9orf3-202ENST00000297979 BPIFA2Q96DR5 249 aa13.08□□□□□ -0.31
C9orf3-202ENST00000297979 SPSB2Q99619 263 aa13.08□□□□□ -0.31
C9orf3-202ENST00000297979 SEMA4CQ9C0C4 833 aa13.08□□□□□ -0.31
C9orf3-202ENST00000297979 LIN28AQ9H9Z2 209 aaKnown RBP13.08□□□□□ -0.31
C9orf3-202ENST00000297979 SCPEP1Q9HB40 452 aa13.08□□□□□ -0.31
C9orf3-202ENST00000297979 ATP13A2Q9NQ11 1180 aa13.08□□□□□ -0.31
C9orf3-202ENST00000297979 R4GN57 208 aa13.08□□□□□ -0.31
C9orf3-202ENST00000297979 BDP1A6H8Y1 2624 aa13.08□□□□□ -0.32
C9orf3-202ENST00000297979 TSPAN2O60636 221 aa13.08□□□□□ -0.32
C9orf3-202ENST00000297979 ICOSLGO75144 302 aa13.08□□□□□ -0.32
C9orf3-202ENST00000297979 CNOT3O75175 753 aaKnown RBP13.08□□□□□ -0.32
C9orf3-202ENST00000297979 TRMUO75648 421 aaKnown RBP13.08□□□□□ -0.32
C9orf3-202ENST00000297979 SFTPCP11686 197 aa13.08□□□□□ -0.32
C9orf3-202ENST00000297979 PSMB9P28065 219 aa13.08□□□□□ -0.32
C9orf3-202ENST00000297979 COPZ1P61923 177 aa13.08□□□□□ -0.32
C9orf3-202ENST00000297979 PSPHP78330 225 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms