RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 CARD8Q9Y2G2 431 aa19.6■□□□□ 0.73
SOX17-201ENST00000297316 TEX51A0A1B0GUA7 166 aa19.6■□□□□ 0.73
SOX17-201ENST00000297316 UNC119BA6NIH7 251 aa19.6■□□□□ 0.73
SOX17-201ENST00000297316 BOLA2-SMG1P6H3BVE0 249 aa19.6■□□□□ 0.73
SOX17-201ENST00000297316 HEXBP07686 556 aa19.6■□□□□ 0.73
SOX17-201ENST00000297316 NGFRP08138 427 aa19.6■□□□□ 0.73
SOX17-201ENST00000297316 FGF5P12034 268 aa19.6■□□□□ 0.73
SOX17-201ENST00000297316 PRKCDQ05655 676 aa19.6■□□□□ 0.73
SOX17-201ENST00000297316 DBPQ10586 325 aaPredicted RBP19.6■□□□□ 0.73
SOX17-201ENST00000297316 ATP1A4Q13733 1029 aa19.6■□□□□ 0.73
SOX17-201ENST00000297316 CPEB4Q17RY0 729 aaKnown RBP eCLIP19.6■□□□□ 0.73
SOX17-201ENST00000297316 ZNF613Q6PF04 617 aa19.6■□□□□ 0.73
SOX17-201ENST00000297316 OVCH1Q7RTY7 1134 aa19.6■□□□□ 0.73
SOX17-201ENST00000297316 AGBL5Q8NDL9 886 aa19.6■□□□□ 0.73
SOX17-201ENST00000297316 ANKK1Q8NFD2 765 aa19.6■□□□□ 0.73
SOX17-201ENST00000297316 OR1N1Q8NGS0 311 aa19.6■□□□□ 0.73
SOX17-201ENST00000297316 LOXL4Q96JB6 756 aa19.6■□□□□ 0.73
SOX17-201ENST00000297316 SLC38A2Q96QD8 506 aa19.6■□□□□ 0.73
SOX17-201ENST00000297316 OR52D1Q9H346 318 aa19.6■□□□□ 0.73
SOX17-201ENST00000297316 TMEM27Q9HBJ8 222 aa19.6■□□□□ 0.73
SOX17-201ENST00000297316 ST6GALNAC1Q9NSC7 600 aaPredicted RBP19.6■□□□□ 0.73
SOX17-201ENST00000297316 PCDHGA5Q9Y5G8 931 aa19.6■□□□□ 0.73
SOX17-201ENST00000297316 PCDHGA3Q9Y5H0 932 aa19.6■□□□□ 0.73
SOX17-201ENST00000297316 KDM4EB2RXH2 506 aaPredicted RBP19.59■□□□□ 0.73
SOX17-201ENST00000297316 MEN1O00255 615 aa19.59■□□□□ 0.73
SOX17-201ENST00000297316 CDX4O14627 284 aaPredicted RBP19.59■□□□□ 0.73
SOX17-201ENST00000297316 NADKO95544 446 aaPredicted RBP19.59■□□□□ 0.73
SOX17-201ENST00000297316 HBQ1P09105 142 aa19.59■□□□□ 0.73
SOX17-201ENST00000297316 ZNF883P0CG24 379 aa19.59■□□□□ 0.73
SOX17-201ENST00000297316 TBXA2RP21731 343 aa19.59■□□□□ 0.73
SOX17-201ENST00000297316 ACP1P24666 158 aa19.59■□□□□ 0.73
SOX17-201ENST00000297316 OPRL1P41146 370 aa19.59■□□□□ 0.73
SOX17-201ENST00000297316 NR0B1P51843 470 aaKnown RBP19.59■□□□□ 0.73
SOX17-201ENST00000297316 LIMK1P53667 647 aa19.59■□□□□ 0.73
SOX17-201ENST00000297316 APOOLQ6UXV4 268 aa19.59■□□□□ 0.73
SOX17-201ENST00000297316 C16orf47Q6ZP98 133 aaPredicted RBP19.59■□□□□ 0.73
SOX17-201ENST00000297316 SHFQ7M4L6 423 aa19.59■□□□□ 0.73
SOX17-201ENST00000297316 ANKRD37Q7Z713 158 aa19.59■□□□□ 0.73
SOX17-201ENST00000297316 ATCAYQ86WG3 371 aa19.59■□□□□ 0.73
SOX17-201ENST00000297316 BBS1Q8NFJ9 593 aa19.59■□□□□ 0.73
SOX17-201ENST00000297316 OR13C2Q8NGS9 318 aa19.59■□□□□ 0.73
SOX17-201ENST00000297316 FAM210AQ96ND0 272 aa19.59■□□□□ 0.73
SOX17-201ENST00000297316 ADOQ96SZ5 270 aa19.59■□□□□ 0.73
SOX17-201ENST00000297316 SYNDIG1LA6NDD5 238 aa19.59■□□□□ 0.73
SOX17-201ENST00000297316 PRODHO43272 600 aa19.59■□□□□ 0.73
SOX17-201ENST00000297316 ETV5P41161 510 aa19.59■□□□□ 0.73
SOX17-201ENST00000297316 CLK1P49759 484 aaKnown RBP19.59■□□□□ 0.73
SOX17-201ENST00000297316 ETV1P50549 477 aa19.59■□□□□ 0.73
SOX17-201ENST00000297316 RNF113BQ8IZP6 322 aaKnown RBP19.59■□□□□ 0.73
SOX17-201ENST00000297316 RNFT2Q96EX2 444 aa19.59■□□□□ 0.73
SOX17-201ENST00000297316 CENPOQ9BU64 300 aa19.59■□□□□ 0.73
SOX17-201ENST00000297316 TAPBPLQ9BX59 468 aa19.59■□□□□ 0.73
SOX17-201ENST00000297316 WWTR1Q9GZV5 400 aa19.59■□□□□ 0.73
SOX17-201ENST00000297316 UBQLN3Q9H347 655 aa19.59■□□□□ 0.73
SOX17-201ENST00000297316 C14orf105Q9NVL8 296 aa19.59■□□□□ 0.73
SOX17-201ENST00000297316 PCNX3Q9H6A9 2034 aa19.58■□□□□ 0.73
SOX17-201ENST00000297316 ZNF318Q5VUA4 2279 aa19.58■□□□□ 0.73
SOX17-201ENST00000297316 LOC100506127A0A0U1RQW1 187 aa19.58■□□□□ 0.73
SOX17-201ENST00000297316 FRG2CA6NGY1 282 aa19.58■□□□□ 0.73
SOX17-201ENST00000297316 SERINC4A6NH21 518 aa19.58■□□□□ 0.73
SOX17-201ENST00000297316 CHP2O43745 196 aa19.58■□□□□ 0.73
SOX17-201ENST00000297316 SOX3P41225 446 aa19.58■□□□□ 0.73
SOX17-201ENST00000297316 GPR143P51810 404 aa19.58■□□□□ 0.73
SOX17-201ENST00000297316 CD226Q15762 336 aa19.58■□□□□ 0.73
SOX17-201ENST00000297316 KIRREL2Q6UWL6 708 aa19.58■□□□□ 0.73
SOX17-201ENST00000297316 THSD4Q6ZMP0 1018 aa19.58■□□□□ 0.73
SOX17-201ENST00000297316 CLDN22Q8N7P3 220 aa19.58■□□□□ 0.73
SOX17-201ENST00000297316 NANOGP1Q8N7R0 232 aa19.58■□□□□ 0.73
SOX17-201ENST00000297316 FANK1Q8TC84 345 aa19.58■□□□□ 0.73
SOX17-201ENST00000297316 CHPT1Q8WUD6 406 aa19.58■□□□□ 0.73
SOX17-201ENST00000297316 ITFG2Q969R8 447 aa19.58■□□□□ 0.73
SOX17-201ENST00000297316 C8orf44Q96CB5 159 aa19.58■□□□□ 0.73
SOX17-201ENST00000297316 BPIFA2Q96DR5 249 aa19.58■□□□□ 0.73
SOX17-201ENST00000297316 ZHX1-C8orf76Q96EF9 292 aa19.58■□□□□ 0.73
SOX17-201ENST00000297316 SPSB2Q99619 263 aa19.58■□□□□ 0.73
SOX17-201ENST00000297316 DCSTAMPQ9H295 470 aa19.58■□□□□ 0.73
SOX17-201ENST00000297316 COPS7AQ9UBW8 275 aa19.58■□□□□ 0.73
SOX17-201ENST00000297316 DIMT1Q9UNQ2 313 aaKnown RBP19.58■□□□□ 0.73
SOX17-201ENST00000297316 C17orf51A8MQB3 221 aa19.58■□□□□ 0.72
SOX17-201ENST00000297316 FLRT2O43155 660 aa19.58■□□□□ 0.72
SOX17-201ENST00000297316 OIP5O43482 229 aa19.58■□□□□ 0.72
SOX17-201ENST00000297316 IL33O95760 270 aa19.58■□□□□ 0.72
SOX17-201ENST00000297316 CSTAP01040 98 aa19.58■□□□□ 0.72
SOX17-201ENST00000297316 AADACL4Q5VUY2 407 aa19.58■□□□□ 0.72
SOX17-201ENST00000297316 C19orf48Q6RUI8 117 aa19.58■□□□□ 0.72
SOX17-201ENST00000297316 CADM2Q8N3J6 435 aa19.58■□□□□ 0.72
SOX17-201ENST00000297316 OR2T33Q8NG76 320 aa19.58■□□□□ 0.72
SOX17-201ENST00000297316 CHCHD6Q9BRQ6 235 aa19.58■□□□□ 0.72
SOX17-201ENST00000297316 RTN4RQ9BZR6 473 aa19.58■□□□□ 0.72
SOX17-201ENST00000297316 KRCC1Q9NPI7 259 aaPredicted RBP19.58■□□□□ 0.72
SOX17-201ENST00000297316 OSGIN1Q9UJX0 560 aa19.58■□□□□ 0.72
SOX17-201ENST00000297316 ERGIC3Q9Y282 383 aa19.58■□□□□ 0.72
SOX17-201ENST00000297316 TTC36A6NLP5 189 aa19.57■□□□□ 0.72
SOX17-201ENST00000297316 ALOX12BO75342 701 aa19.57■□□□□ 0.72
SOX17-201ENST00000297316 SULT1C4O75897 302 aa19.57■□□□□ 0.72
SOX17-201ENST00000297316 IMPDH2P12268 514 aa19.57■□□□□ 0.72
SOX17-201ENST00000297316 CD59P13987 128 aa19.57■□□□□ 0.72
SOX17-201ENST00000297316 RPS3AP61247 264 aaKnown RBP19.57■□□□□ 0.72
SOX17-201ENST00000297316 IL11RAQ14626 422 aa19.57■□□□□ 0.72
SOX17-201ENST00000297316 CLPPQ16740 277 aaPredicted RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms