RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 PCDHB10Q9UN67 800 aa16.5■□□□□ 0.23
CDC42EP3-201ENST00000295324 NOVA1P51513 510 aaKnown RBP16.5■□□□□ 0.23
CDC42EP3-201ENST00000295324 LTB4RQ15722 352 aa16.5■□□□□ 0.23
CDC42EP3-201ENST00000295324 PODNL1Q6PEZ8 512 aa16.5■□□□□ 0.23
CDC42EP3-201ENST00000295324 GLIPR2Q9H4G4 154 aa16.5■□□□□ 0.23
CDC42EP3-201ENST00000295324 WSB2Q9NYS7 404 aaPredicted RBP16.5■□□□□ 0.23
CDC42EP3-201ENST00000295324 DNAJB11Q9UBS4 358 aa16.5■□□□□ 0.23
CDC42EP3-201ENST00000295324 ST14Q9Y5Y6 855 aa16.5■□□□□ 0.23
CDC42EP3-201ENST00000295324 ZSCAN5BA6NJL1 495 aa16.5■□□□□ 0.23
CDC42EP3-201ENST00000295324 GFYI3L273 518 aa16.5■□□□□ 0.23
CDC42EP3-201ENST00000295324 SUSD5O60279 629 aa16.5■□□□□ 0.23
CDC42EP3-201ENST00000295324 WDPCPO95876 746 aa16.5■□□□□ 0.23
CDC42EP3-201ENST00000295324 GSTT2P0CG29 244 aa16.5■□□□□ 0.23
CDC42EP3-201ENST00000295324 BMP1P13497 986 aa16.5■□□□□ 0.23
CDC42EP3-201ENST00000295324 MAOAP21397 527 aa16.5■□□□□ 0.23
CDC42EP3-201ENST00000295324 TACR3P29371 465 aa16.5■□□□□ 0.23
CDC42EP3-201ENST00000295324 SOX3P41225 446 aa16.5■□□□□ 0.23
CDC42EP3-201ENST00000295324 S100A10P60903 97 aa16.5■□□□□ 0.23
CDC42EP3-201ENST00000295324 XKRXQ6PP77 449 aa16.5■□□□□ 0.23
CDC42EP3-201ENST00000295324 Q6ZSR9 355 aa16.5■□□□□ 0.23
CDC42EP3-201ENST00000295324 ZFP41Q8N8Y5 198 aa16.5■□□□□ 0.23
CDC42EP3-201ENST00000295324 FNDC8Q8TC99 324 aa16.5■□□□□ 0.23
CDC42EP3-201ENST00000295324 GPR148Q8TDV2 347 aa16.5■□□□□ 0.23
CDC42EP3-201ENST00000295324 ALG8Q9BVK2 526 aa16.5■□□□□ 0.23
CDC42EP3-201ENST00000295324 MUTYHQ9UIF7 546 aa16.5■□□□□ 0.23
CDC42EP3-201ENST00000295324 ZNF850A8MQ14 1090 aa16.5■□□□□ 0.23
CDC42EP3-201ENST00000295324 OR7A10O76100 309 aa16.5■□□□□ 0.23
CDC42EP3-201ENST00000295324 ZNF182P17025 639 aaPredicted RBP16.5■□□□□ 0.23
CDC42EP3-201ENST00000295324 AP2S1P53680 142 aaPredicted RBP16.5■□□□□ 0.23
CDC42EP3-201ENST00000295324 PRSS48Q7RTY5 328 aa16.5■□□□□ 0.23
CDC42EP3-201ENST00000295324 CADM4Q8NFZ8 388 aa16.5■□□□□ 0.23
CDC42EP3-201ENST00000295324 CHTF18Q8WVB6 975 aa16.5■□□□□ 0.23
CDC42EP3-201ENST00000295324 LOXL2Q9Y4K0 774 aa16.5■□□□□ 0.23
CDC42EP3-201ENST00000295324 C13orf42A0A1B0GVH6 325 aa16.49■□□□□ 0.23
CDC42EP3-201ENST00000295324 KANTRA0A1W2PQU2 76 aa16.49■□□□□ 0.23
CDC42EP3-201ENST00000295324 LCKP06239 509 aa16.49■□□□□ 0.23
CDC42EP3-201ENST00000295324 LIM2P55344 173 aa16.49■□□□□ 0.23
CDC42EP3-201ENST00000295324 ADGRG5Q8IZF4 528 aa16.49■□□□□ 0.23
CDC42EP3-201ENST00000295324 SAP130Q9H0E3 1048 aa16.49■□□□□ 0.23
CDC42EP3-201ENST00000295324 LRIT2A6NDA9 550 aa16.49■□□□□ 0.23
CDC42EP3-201ENST00000295324 LMO7DNF2Z398 122 aa16.49■□□□□ 0.23
CDC42EP3-201ENST00000295324 ATP6V1G1O75348 118 aa16.49■□□□□ 0.23
CDC42EP3-201ENST00000295324 PLEKHN1Q494U1 663 aaPredicted RBP16.49■□□□□ 0.23
CDC42EP3-201ENST00000295324 LANCL3Q6ZV70 420 aa16.49■□□□□ 0.23
CDC42EP3-201ENST00000295324 THOC3Q96J01 351 aaKnown RBP16.49■□□□□ 0.23
CDC42EP3-201ENST00000295324 CPPED1Q9BRF8 314 aaPredicted RBP16.49■□□□□ 0.23
CDC42EP3-201ENST00000295324 A0A1W2PPW3 197 aa16.49■□□□□ 0.23
CDC42EP3-201ENST00000295324 EIF1BO60739 113 aaKnown RBP16.49■□□□□ 0.23
CDC42EP3-201ENST00000295324 RAB3BP20337 219 aa16.49■□□□□ 0.23
CDC42EP3-201ENST00000295324 TMEM244Q5VVB8 128 aa16.49■□□□□ 0.23
CDC42EP3-201ENST00000295324 AWAT2Q6E213 333 aa16.49■□□□□ 0.23
CDC42EP3-201ENST00000295324 SLC25A25Q6KCM7 469 aa16.49■□□□□ 0.23
CDC42EP3-201ENST00000295324 LSMEM2Q8N112 164 aa16.49■□□□□ 0.23
CDC42EP3-201ENST00000295324 GPR171O14626 319 aa16.49■□□□□ 0.23
CDC42EP3-201ENST00000295324 ART1P52961 327 aa16.49■□□□□ 0.23
CDC42EP3-201ENST00000295324 PDE7AQ13946 482 aa16.49■□□□□ 0.23
CDC42EP3-201ENST00000295324 KEAP1Q14145 624 aa16.49■□□□□ 0.23
CDC42EP3-201ENST00000295324 BAHD1Q8TBE0 780 aaPredicted RBP16.49■□□□□ 0.23
CDC42EP3-201ENST00000295324 CASTOR1Q8WTX7 329 aa16.49■□□□□ 0.23
CDC42EP3-201ENST00000295324 CDCP1Q9H5V8 836 aa16.49■□□□□ 0.23
CDC42EP3-201ENST00000295324 FAM86C1Q9NVL1 165 aa16.49■□□□□ 0.23
CDC42EP3-201ENST00000295324 ABCG2Q9UNQ0 655 aa16.49■□□□□ 0.23
CDC42EP3-201ENST00000295324 ZNF175Q9Y473 711 aa16.49■□□□□ 0.23
CDC42EP3-201ENST00000295324 LAMA4Q16363 1823 aa16.49■□□□□ 0.23
CDC42EP3-201ENST00000295324 SPTY2D1-AS1A0A0U1RR47 76 aa16.48■□□□□ 0.23
CDC42EP3-201ENST00000295324 G3V3Y1 287 aa16.48■□□□□ 0.23
CDC42EP3-201ENST00000295324 TRHRP34981 398 aaPredicted RBP16.48■□□□□ 0.23
CDC42EP3-201ENST00000295324 DLSTP36957 453 aa16.48■□□□□ 0.23
CDC42EP3-201ENST00000295324 CPT1CQ8TCG5 803 aa16.48■□□□□ 0.23
CDC42EP3-201ENST00000295324 SLC38A5Q8WUX1 472 aa16.48■□□□□ 0.23
CDC42EP3-201ENST00000295324 CDX2Q99626 313 aaPredicted RBP16.48■□□□□ 0.23
CDC42EP3-201ENST00000295324 J3QRK9 145 aa16.48■□□□□ 0.23
CDC42EP3-201ENST00000295324 IFNA7P01567 189 aa16.48■□□□□ 0.23
CDC42EP3-201ENST00000295324 TPOP07202 933 aa16.48■□□□□ 0.23
CDC42EP3-201ENST00000295324 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.48■□□□□ 0.23
CDC42EP3-201ENST00000295324 KIAA1211LQ6NV74 962 aa16.48■□□□□ 0.23
CDC42EP3-201ENST00000295324 KIAA0907Q7Z7F0 614 aaPredicted RBP16.48■□□□□ 0.23
CDC42EP3-201ENST00000295324 ISL2Q96A47 359 aa16.48■□□□□ 0.23
CDC42EP3-201ENST00000295324 MVB12AQ96EY5 273 aa16.48■□□□□ 0.23
CDC42EP3-201ENST00000295324 MYEOVQ96EZ4 313 aa16.48■□□□□ 0.23
CDC42EP3-201ENST00000295324 CCDC120Q96HB5 630 aa16.48■□□□□ 0.23
CDC42EP3-201ENST00000295324 DAPP1Q9UN19 280 aa16.48■□□□□ 0.23
CDC42EP3-201ENST00000295324 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.48■□□□□ 0.23
CDC42EP3-201ENST00000295324 TRAV27A0A087WT01 109 aa16.48■□□□□ 0.23
CDC42EP3-201ENST00000295324 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.48■□□□□ 0.23
CDC42EP3-201ENST00000295324 SSTR4P31391 388 aa16.48■□□□□ 0.23
CDC42EP3-201ENST00000295324 ZNF45Q02386 682 aa16.48■□□□□ 0.23
CDC42EP3-201ENST00000295324 KCTD9Q7L273 389 aa16.48■□□□□ 0.23
CDC42EP3-201ENST00000295324 SLC6A20Q9NP91 592 aa16.48■□□□□ 0.23
CDC42EP3-201ENST00000295324 NSA2O95478 260 aaKnown RBP16.48■□□□□ 0.23
CDC42EP3-201ENST00000295324 F10P00742 488 aa16.48■□□□□ 0.23
CDC42EP3-201ENST00000295324 ARNTP27540 789 aa16.48■□□□□ 0.23
CDC42EP3-201ENST00000295324 WNT4P56705 351 aa16.48■□□□□ 0.23
CDC42EP3-201ENST00000295324 UGT8Q16880 541 aa16.48■□□□□ 0.23
CDC42EP3-201ENST00000295324 TMEM64Q6YI46 380 aa16.48■□□□□ 0.23
CDC42EP3-201ENST00000295324 LGALS12Q96DT0 336 aa16.48■□□□□ 0.23
CDC42EP3-201ENST00000295324 NEURL3Q96EH8 262 aa16.48■□□□□ 0.23
CDC42EP3-201ENST00000295324 PRRX2Q99811 253 aa16.48■□□□□ 0.23
CDC42EP3-201ENST00000295324 RREB1Q92766 1687 aa16.48■□□□□ 0.23
CDC42EP3-201ENST00000295324 HTR3BO95264 441 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms