RNA–Protein interactions for RNA: ENST00000290460.7

SCUBE1-201, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SCUBE1, Length 2,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-201ENST00000290460 OR10A3P58181 314 aa18.42■□□□□ 0.54
SCUBE1-201ENST00000290460 UBE2IP63279 158 aaKnown RBP18.42■□□□□ 0.54
SCUBE1-201ENST00000290460 CD83Q01151 205 aa18.42■□□□□ 0.54
SCUBE1-201ENST00000290460 FAM53BQ14153 422 aa18.42■□□□□ 0.54
SCUBE1-201ENST00000290460 ZCCHC12Q6PEW1 402 aa18.42■□□□□ 0.54
SCUBE1-201ENST00000290460 RFLNBQ8N5W9 214 aa18.42■□□□□ 0.54
SCUBE1-201ENST00000290460 HMGB4Q8WW32 186 aa18.42■□□□□ 0.54
SCUBE1-201ENST00000290460 C4orf36Q96KX1 117 aa18.42■□□□□ 0.54
SCUBE1-201ENST00000290460 TMEM43Q9BTV4 400 aa18.42■□□□□ 0.54
SCUBE1-201ENST00000290460 ADGRL4Q9HBW9 690 aa18.42■□□□□ 0.54
SCUBE1-201ENST00000290460 POT1Q9NUX5 634 aa18.42■□□□□ 0.54
SCUBE1-201ENST00000290460 NLKQ9UBE8 527 aa18.42■□□□□ 0.54
SCUBE1-201ENST00000290460 DTX4Q9Y2E6 619 aa18.42■□□□□ 0.54
SCUBE1-201ENST00000290460 LAMA1P25391 3075 aa18.42■□□□□ 0.54
SCUBE1-201ENST00000290460 A0A0G2JMP0 313 aa18.41■□□□□ 0.54
SCUBE1-201ENST00000290460 A0A0X1KG70 313 aa18.41■□□□□ 0.54
SCUBE1-201ENST00000290460 A0A1B0GVC2 190 aa18.41■□□□□ 0.54
SCUBE1-201ENST00000290460 OR2W5A6NFC9 320 aa18.41■□□□□ 0.54
SCUBE1-201ENST00000290460 A6NIN4 97 aa18.41■□□□□ 0.54
SCUBE1-201ENST00000290460 RIIAD1A6NNX1 92 aa18.41■□□□□ 0.54
SCUBE1-201ENST00000290460 J3QLW9 94 aa18.41■□□□□ 0.54
SCUBE1-201ENST00000290460 PTP4A3O75365 173 aa18.41■□□□□ 0.54
SCUBE1-201ENST00000290460 ST6GAL1P15907 406 aa18.41■□□□□ 0.54
SCUBE1-201ENST00000290460 ZNF19P17023 458 aa18.41■□□□□ 0.54
SCUBE1-201ENST00000290460 OR12D2P58182 307 aa18.41■□□□□ 0.54
SCUBE1-201ENST00000290460 C1orf61Q13536 156 aa18.41■□□□□ 0.54
SCUBE1-201ENST00000290460 HTR4Q13639 388 aa18.41■□□□□ 0.54
SCUBE1-201ENST00000290460 ZNF613Q6PF04 617 aa18.41■□□□□ 0.54
SCUBE1-201ENST00000290460 PLET1Q6UQ28 207 aa18.41■□□□□ 0.54
SCUBE1-201ENST00000290460 OAFQ86UD1 273 aa18.41■□□□□ 0.54
SCUBE1-201ENST00000290460 OR4M2Q8NGB6 313 aa18.41■□□□□ 0.54
SCUBE1-201ENST00000290460 OR4C6Q8NH72 309 aa18.41■□□□□ 0.54
SCUBE1-201ENST00000290460 PEX11GQ96HA9 241 aa18.41■□□□□ 0.54
SCUBE1-201ENST00000290460 SMAD5Q99717 465 aaKnown RBP18.41■□□□□ 0.54
SCUBE1-201ENST00000290460 ZNF559Q9BR84 538 aa18.41■□□□□ 0.54
SCUBE1-201ENST00000290460 EXTL2Q9UBQ6 330 aa18.41■□□□□ 0.54
SCUBE1-201ENST00000290460 TMEM5Q9Y2B1 443 aa18.41■□□□□ 0.54
SCUBE1-201ENST00000290460 SLC35A3Q9Y2D2 325 aa18.41■□□□□ 0.54
SCUBE1-201ENST00000290460 ENTPD2Q9Y5L3 495 aa18.41■□□□□ 0.54
SCUBE1-201ENST00000290460 LYRM1O43325 122 aa18.4■□□□□ 0.54
SCUBE1-201ENST00000290460 NKX2-2O95096 273 aa18.4■□□□□ 0.54
SCUBE1-201ENST00000290460 SBK2P0C263 348 aa18.4■□□□□ 0.54
SCUBE1-201ENST00000290460 GABRG2P18507 467 aa18.4■□□□□ 0.54
SCUBE1-201ENST00000290460 ACVR1BP36896 505 aa18.4■□□□□ 0.54
SCUBE1-201ENST00000290460 MTNR1BP49286 362 aa18.4■□□□□ 0.54
SCUBE1-201ENST00000290460 HCCSP53701 268 aa18.4■□□□□ 0.54
SCUBE1-201ENST00000290460 ZNF85Q03923 595 aa18.4■□□□□ 0.54
SCUBE1-201ENST00000290460 NNATQ16517 81 aa18.4■□□□□ 0.54
SCUBE1-201ENST00000290460 TATDN3Q17R31 274 aa18.4■□□□□ 0.54
SCUBE1-201ENST00000290460 RPL13AP3Q6NVV1 102 aa18.4■□□□□ 0.54
SCUBE1-201ENST00000290460 METAP1DQ6UB28 335 aaPredicted RBP18.4■□□□□ 0.54
SCUBE1-201ENST00000290460 SSX6Q7RTT6 188 aa18.4■□□□□ 0.54
SCUBE1-201ENST00000290460 GPBAR1Q8TDU6 330 aa18.4■□□□□ 0.54
SCUBE1-201ENST00000290460 NDC1Q9BTX1 674 aa18.4■□□□□ 0.54
SCUBE1-201ENST00000290460 PLSCR3Q9NRY6 295 aa18.4■□□□□ 0.54
SCUBE1-201ENST00000290460 RBFOX1Q9NWB1 397 aaKnown RBP18.4■□□□□ 0.54
SCUBE1-201ENST00000290460 RGS13O14921 159 aa18.4■□□□□ 0.54
SCUBE1-201ENST00000290460 MAGEB4O15481 346 aaPredicted RBP18.4■□□□□ 0.54
SCUBE1-201ENST00000290460 CHP2O43745 196 aa18.4■□□□□ 0.54
SCUBE1-201ENST00000290460 AK1P00568 194 aa18.4■□□□□ 0.54
SCUBE1-201ENST00000290460 TNFP01375 233 aa18.4■□□□□ 0.54
SCUBE1-201ENST00000290460 MT-ND5P03915 603 aa18.4■□□□□ 0.54
SCUBE1-201ENST00000290460 ATXN8OSP0DMR3 200 aa18.4■□□□□ 0.54
SCUBE1-201ENST00000290460 SLC2A5P22732 501 aa18.4■□□□□ 0.54
SCUBE1-201ENST00000290460 ACAA2P42765 397 aaKnown RBP18.4■□□□□ 0.54
SCUBE1-201ENST00000290460 YPEL5P62699 121 aa18.4■□□□□ 0.54
SCUBE1-201ENST00000290460 RACK1P63244 317 aaKnown RBP18.4■□□□□ 0.54
SCUBE1-201ENST00000290460 ARL14Q8N4G2 192 aa18.4■□□□□ 0.54
SCUBE1-201ENST00000290460 SMPDL3BQ92485 455 aa18.4■□□□□ 0.54
SCUBE1-201ENST00000290460 SNX18Q96RF0 628 aa18.4■□□□□ 0.54
SCUBE1-201ENST00000290460 MCCC2Q9HCC0 563 aa18.4■□□□□ 0.54
SCUBE1-201ENST00000290460 DNAJB12Q9NXW2 375 aaKnown RBP18.4■□□□□ 0.54
SCUBE1-201ENST00000290460 PCDHGB7Q9Y5F8 929 aa18.4■□□□□ 0.54
SCUBE1-201ENST00000290460 TGFBR3LH3BV60 316 aa18.39■□□□□ 0.54
SCUBE1-201ENST00000290460 S1PR1P21453 382 aa18.39■□□□□ 0.54
SCUBE1-201ENST00000290460 GALP22466 123 aa18.39■□□□□ 0.54
SCUBE1-201ENST00000290460 CFL1P23528 166 aaKnown RBP18.39■□□□□ 0.54
SCUBE1-201ENST00000290460 RAB38P57729 211 aa18.39■□□□□ 0.54
SCUBE1-201ENST00000290460 CRYZQ08257 329 aaKnown RBP18.39■□□□□ 0.54
SCUBE1-201ENST00000290460 FHL1Q13642 323 aa18.39■□□□□ 0.54
SCUBE1-201ENST00000290460 ALG10BQ5I7T1 473 aa18.39■□□□□ 0.54
SCUBE1-201ENST00000290460 TAF8Q7Z7C8 310 aa18.39■□□□□ 0.54
SCUBE1-201ENST00000290460 CADM2Q8N3J6 435 aa18.39■□□□□ 0.54
SCUBE1-201ENST00000290460 OR13C5Q8NGS8 318 aa18.39■□□□□ 0.54
SCUBE1-201ENST00000290460 OR5J2Q8NH18 312 aa18.39■□□□□ 0.54
SCUBE1-201ENST00000290460 UPRTQ96BW1 309 aa18.39■□□□□ 0.54
SCUBE1-201ENST00000290460 WACQ9BTA9 647 aa18.39■□□□□ 0.54
SCUBE1-201ENST00000290460 SLC28A3Q9HAS3 691 aa18.39■□□□□ 0.54
SCUBE1-201ENST00000290460 HCN3Q9P1Z3 774 aa18.39■□□□□ 0.54
SCUBE1-201ENST00000290460 COQ9O75208 318 aa18.39■□□□□ 0.53
SCUBE1-201ENST00000290460 SEMA4FO95754 770 aa18.39■□□□□ 0.53
SCUBE1-201ENST00000290460 FAM157BP0CG42 384 aa18.39■□□□□ 0.53
SCUBE1-201ENST00000290460 SLC35E2P0CK97 266 aa18.39■□□□□ 0.53
SCUBE1-201ENST00000290460 TRAPPC2P0DI81 140 aa18.39■□□□□ 0.53
SCUBE1-201ENST00000290460 TRAPPC2BP0DI82 140 aa18.39■□□□□ 0.53
SCUBE1-201ENST00000290460 PRKAR1AP10644 381 aa18.39■□□□□ 0.53
SCUBE1-201ENST00000290460 ZNF3P17036 446 aa18.39■□□□□ 0.53
SCUBE1-201ENST00000290460 CCDC85BQ15834 202 aaPredicted RBP18.39■□□□□ 0.53
SCUBE1-201ENST00000290460 NDUFAF6Q330K2 333 aa18.39■□□□□ 0.53
SCUBE1-201ENST00000290460 HBMQ6B0K9 141 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms