RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 FGF5P12034 268 aa9.33□□□□□ -0.92
C9orf43-201ENST00000288462 BMP7P18075 431 aa9.33□□□□□ -0.92
C9orf43-201ENST00000288462 HTR1FP30939 366 aa9.33□□□□□ -0.92
C9orf43-201ENST00000288462 CDH11P55287 796 aa9.33□□□□□ -0.92
C9orf43-201ENST00000288462 LSM3P62310 102 aaKnown RBP9.33□□□□□ -0.92
C9orf43-201ENST00000288462 DCDP81605 110 aaKnown RBP9.33□□□□□ -0.92
C9orf43-201ENST00000288462 DCTN2Q13561 401 aaKnown RBP9.33□□□□□ -0.92
C9orf43-201ENST00000288462 SPHARQ15513 63 aa9.33□□□□□ -0.92
C9orf43-201ENST00000288462 SSX1Q16384 188 aa9.33□□□□□ -0.92
C9orf43-201ENST00000288462 ZNF528Q3MIS6 628 aa9.33□□□□□ -0.92
C9orf43-201ENST00000288462 HLA-DQA1Q5Y7H0 255 aa9.33□□□□□ -0.92
C9orf43-201ENST00000288462 OVCH1Q7RTY7 1134 aa9.33□□□□□ -0.92
C9orf43-201ENST00000288462 ANKRD37Q7Z713 158 aa9.33□□□□□ -0.92
C9orf43-201ENST00000288462 SLCO6A1Q86UG4 719 aa9.33□□□□□ -0.92
C9orf43-201ENST00000288462 BPHLQ86WA6 291 aaPredicted RBP9.33□□□□□ -0.92
C9orf43-201ENST00000288462 PRR22Q8IZ63 422 aa9.33□□□□□ -0.92
C9orf43-201ENST00000288462 GATSQ8NAP1 163 aa9.33□□□□□ -0.92
C9orf43-201ENST00000288462 RNF31Q96EP0 1072 aa9.33□□□□□ -0.92
C9orf43-201ENST00000288462 HSPBAP1Q96EW2 488 aa9.33□□□□□ -0.92
C9orf43-201ENST00000288462 ADOQ96SZ5 270 aa9.33□□□□□ -0.92
C9orf43-201ENST00000288462 SLC19A3Q9BZV2 496 aa9.33□□□□□ -0.92
C9orf43-201ENST00000288462 NRSN2Q9GZP1 204 aa9.33□□□□□ -0.92
C9orf43-201ENST00000288462 MCCC2Q9HCC0 563 aa9.33□□□□□ -0.92
C9orf43-201ENST00000288462 CMC2Q9NRP2 79 aa9.33□□□□□ -0.92
C9orf43-201ENST00000288462 PPIEQ9UNP9 301 aaKnown RBP9.33□□□□□ -0.92
C9orf43-201ENST00000288462 BAIAP2Q9UQB8 552 aa9.33□□□□□ -0.92
C9orf43-201ENST00000288462 ZDBF2Q9HCK1 2354 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 ASCC3Q8N3C0 2202 aaKnown RBP9.32□□□□□ -0.92
C9orf43-201ENST00000288462 TRAV27A0A087WT01 109 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 TMEM129A0AVI4 362 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 SAGE2PA6NJ88 616 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 IDSB3KWA1 339 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 M0R3G1 203 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 CCRL2O00421 344 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 MYL12BO14950 172 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 ZNF264O43296 627 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 IGF2P01344 180 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 CYC1P08574 325 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 HPGDP15428 266 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 IL12BP29460 328 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 UGT2B10P36537 528 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 ETV5P41161 510 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 ETV1P50549 477 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 NR0B1P51843 470 aaKnown RBP9.32□□□□□ -0.92
C9orf43-201ENST00000288462 FOXL2P58012 376 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 COPZ1P61923 177 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 CRYZQ08257 329 aaKnown RBP9.32□□□□□ -0.92
C9orf43-201ENST00000288462 PLCXD2Q0VAA5 305 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 MLLT11Q13015 90 aaPredicted RBP9.32□□□□□ -0.92
C9orf43-201ENST00000288462 TRA2AQ13595 282 aaKnown RBP eCLIP9.32□□□□□ -0.92
C9orf43-201ENST00000288462 TSTQ16762 297 aaKnown RBP9.32□□□□□ -0.92
C9orf43-201ENST00000288462 PHF19Q5T6S3 580 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 WBP2NLQ6ICG8 309 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 NIPAL3Q6P499 406 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 PAQR6Q6TCH4 344 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 LINC00299Q6ZSB3 139 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 SHISA6Q6ZSJ9 500 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 CXXC5Q7LFL8 322 aaKnown RBP9.32□□□□□ -0.92
C9orf43-201ENST00000288462 PPP1R3BQ86XI6 285 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 GID4Q8IVV7 300 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 BMPERQ8N8U9 685 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 NFAM1Q8NET5 270 aaPredicted RBP9.32□□□□□ -0.92
C9orf43-201ENST00000288462 BBS1Q8NFJ9 593 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 PHOSPHO1Q8TCT1 267 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 OMA1Q96E52 524 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 JAM3Q9BX67 310 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 SLC26A1Q9H2B4 701 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 OCIAD1Q9NX40 245 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 OSGIN1Q9UJX0 560 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 EXOGQ9Y2C4 368 aaKnown RBP9.32□□□□□ -0.92
C9orf43-201ENST00000288462 EXOSC1Q9Y3B2 195 aaKnown RBP9.32□□□□□ -0.92
C9orf43-201ENST00000288462 IGKV1D-42A0A075B6H8 117 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 HTR3EA5X5Y0 456 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 ALG1L2C9J202 215 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 ALOX12BO75342 701 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 REM1O75628 298 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 SP9P0CG40 484 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 HSMCR30P0CW71 290 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 PNMTP11086 282 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 MYL12AP19105 171 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 MST1P26927 711 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 ABCD3P28288 659 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 SLC9A3P48764 834 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 ENTPD1P49961 510 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 PNLIPRP2P54317 469 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 C1DQ13901 141 aaKnown RBP9.32□□□□□ -0.92
C9orf43-201ENST00000288462 MOGQ16653 247 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 FAAH2Q6GMR7 532 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 CBLN3Q6UW01 205 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 ATG4DQ86TL0 474 aaPredicted RBP9.32□□□□□ -0.92
C9orf43-201ENST00000288462 OAFQ86UD1 273 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 SGTBQ96EQ0 304 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 SPSB2Q99619 263 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 TMEM43Q9BTV4 400 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 GTPBP2Q9BX10 602 aaKnown RBP9.32□□□□□ -0.92
C9orf43-201ENST00000288462 LAT2Q9GZY6 243 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 APMAPQ9HDC9 416 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 CARD8Q9Y2G2 431 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 PMF1-BGLAPU3KQ54 211 aa9.32□□□□□ -0.92
C9orf43-201ENST00000288462 IGHV3-20A0A0C4DH32 117 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms