RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 CADM2Q8N3J6 435 aa17.23■□□□□ 0.35
PDLIM3-202ENST00000284770 WDSUB1Q8N9V3 476 aa17.23■□□□□ 0.35
PDLIM3-202ENST00000284770 SLC7A13Q8TCU3 470 aa17.23■□□□□ 0.35
PDLIM3-202ENST00000284770 GPR119Q8TDV5 335 aa17.23■□□□□ 0.35
PDLIM3-202ENST00000284770 HAS2Q92819 552 aa17.23■□□□□ 0.35
PDLIM3-202ENST00000284770 SIGLEC12Q96PQ1 595 aa17.23■□□□□ 0.35
PDLIM3-202ENST00000284770 KLHDC3Q9BQ90 382 aa17.23■□□□□ 0.35
PDLIM3-202ENST00000284770 Q9H521 79 aa17.23■□□□□ 0.35
PDLIM3-202ENST00000284770 MED11Q9P086 117 aa17.23■□□□□ 0.35
PDLIM3-202ENST00000284770 RPS6KB2Q9UBS0 482 aa17.23■□□□□ 0.35
PDLIM3-202ENST00000284770 SLC7A7Q9UM01 511 aa17.23■□□□□ 0.35
PDLIM3-202ENST00000284770 C1QTNF9BB2RNN3 333 aa17.22■□□□□ 0.35
PDLIM3-202ENST00000284770 NUDT14O95848 222 aa17.22■□□□□ 0.35
PDLIM3-202ENST00000284770 C1QTNF9P0C862 333 aa17.22■□□□□ 0.35
PDLIM3-202ENST00000284770 INPP5JQ15735 1006 aaPredicted RBP17.22■□□□□ 0.35
PDLIM3-202ENST00000284770 DCST1Q5T197 706 aa17.22■□□□□ 0.35
PDLIM3-202ENST00000284770 ZNF770Q6IQ21 691 aaPredicted RBP17.22■□□□□ 0.35
PDLIM3-202ENST00000284770 ULK3Q6PHR2 472 aa17.22■□□□□ 0.35
PDLIM3-202ENST00000284770 CHERPQ8IWX8 916 aaKnown RBP17.22■□□□□ 0.35
PDLIM3-202ENST00000284770 MARVELD2Q8N4S9 558 aa17.22■□□□□ 0.35
PDLIM3-202ENST00000284770 OR10G2Q8NGC3 310 aa17.22■□□□□ 0.35
PDLIM3-202ENST00000284770 ZNF563Q8TA94 476 aa17.22■□□□□ 0.35
PDLIM3-202ENST00000284770 DNAJA4Q8WW22 397 aaPredicted RBP17.22■□□□□ 0.35
PDLIM3-202ENST00000284770 TMCC3Q9ULS5 477 aa17.22■□□□□ 0.35
PDLIM3-202ENST00000284770 CACNA1AO00555 2505 aa17.21■□□□□ 0.35
PDLIM3-202ENST00000284770 ARRDC5A6NEK1 342 aa17.21■□□□□ 0.35
PDLIM3-202ENST00000284770 ANKUB1A6NFN9 424 aa17.21■□□□□ 0.35
PDLIM3-202ENST00000284770 SLC25A12O75746 678 aa17.21■□□□□ 0.35
PDLIM3-202ENST00000284770 LYPD3O95274 346 aa17.21■□□□□ 0.35
PDLIM3-202ENST00000284770 IGFBP5P24593 272 aa17.21■□□□□ 0.35
PDLIM3-202ENST00000284770 UCNP55089 124 aa17.21■□□□□ 0.35
PDLIM3-202ENST00000284770 ADARB1P78563 741 aaKnown RBP17.21■□□□□ 0.35
PDLIM3-202ENST00000284770 SEC23BQ15437 767 aa17.21■□□□□ 0.35
PDLIM3-202ENST00000284770 ZIK1Q3SY52 487 aaPredicted RBP17.21■□□□□ 0.35
PDLIM3-202ENST00000284770 ALG10BQ5I7T1 473 aa17.21■□□□□ 0.35
PDLIM3-202ENST00000284770 IGFL2Q6UWQ7 119 aa17.21■□□□□ 0.35
PDLIM3-202ENST00000284770 DHRSXQ8N5I4 330 aa17.21■□□□□ 0.35
PDLIM3-202ENST00000284770 FADS6Q8N9I5 356 aa17.21■□□□□ 0.35
PDLIM3-202ENST00000284770 ZNF524Q96C55 264 aa17.21■□□□□ 0.35
PDLIM3-202ENST00000284770 TMEM41AQ96HV5 264 aa17.21■□□□□ 0.35
PDLIM3-202ENST00000284770 MBOAT4Q96T53 435 aa17.21■□□□□ 0.35
PDLIM3-202ENST00000284770 FEVQ99581 238 aa17.21■□□□□ 0.35
PDLIM3-202ENST00000284770 ANKRD60Q9BZ19 345 aa17.21■□□□□ 0.35
PDLIM3-202ENST00000284770 TOR3AQ9H497 397 aa17.21■□□□□ 0.35
PDLIM3-202ENST00000284770 HRH3Q9Y5N1 445 aa17.21■□□□□ 0.35
PDLIM3-202ENST00000284770 ACACAQ13085 2346 aa17.21■□□□□ 0.34
PDLIM3-202ENST00000284770 MED19A0JLT2 244 aaPredicted RBP17.2■□□□□ 0.34
PDLIM3-202ENST00000284770 G3V3Y1 287 aa17.2■□□□□ 0.34
PDLIM3-202ENST00000284770 CHP2O43745 196 aa17.2■□□□□ 0.34
PDLIM3-202ENST00000284770 MITFO75030 526 aaPredicted RBP17.2■□□□□ 0.34
PDLIM3-202ENST00000284770 CCNB2O95067 398 aa17.2■□□□□ 0.34
PDLIM3-202ENST00000284770 CNR1P21554 472 aa17.2■□□□□ 0.34
PDLIM3-202ENST00000284770 MST1P26927 711 aa17.2■□□□□ 0.34
PDLIM3-202ENST00000284770 SLC1A3P43003 542 aa17.2■□□□□ 0.34
PDLIM3-202ENST00000284770 TOMM34Q15785 309 aaPredicted RBP17.2■□□□□ 0.34
PDLIM3-202ENST00000284770 RFX4Q33E94 735 aa17.2■□□□□ 0.34
PDLIM3-202ENST00000284770 SWT1Q5T5J6 900 aaKnown RBP17.2■□□□□ 0.34
PDLIM3-202ENST00000284770 PODNL1Q6PEZ8 512 aa17.2■□□□□ 0.34
PDLIM3-202ENST00000284770 UNQ6494/PRO21346Q6UXR6 183 aa17.2■□□□□ 0.34
PDLIM3-202ENST00000284770 PLCZ1Q86YW0 608 aa17.2■□□□□ 0.34
PDLIM3-202ENST00000284770 NKAIN4Q8IVV8 208 aa17.2■□□□□ 0.34
PDLIM3-202ENST00000284770 ATG16L2Q8NAA4 619 aa17.2■□□□□ 0.34
PDLIM3-202ENST00000284770 OR2M3Q8NG83 312 aa17.2■□□□□ 0.34
PDLIM3-202ENST00000284770 OR9Q2Q8NGE9 314 aa17.2■□□□□ 0.34
PDLIM3-202ENST00000284770 SLC38A4Q969I6 547 aa17.2■□□□□ 0.34
PDLIM3-202ENST00000284770 PRSS27Q9BQR3 290 aa17.2■□□□□ 0.34
PDLIM3-202ENST00000284770 DSN1Q9H410 356 aa17.2■□□□□ 0.34
PDLIM3-202ENST00000284770 SELENONQ9NZV5 590 aa17.2■□□□□ 0.34
PDLIM3-202ENST00000284770 FRYQ5TBA9 3013 aa17.2■□□□□ 0.34
PDLIM3-202ENST00000284770 SH3PXD2BA1X283 911 aa17.2■□□□□ 0.34
PDLIM3-202ENST00000284770 H0YAE9 185 aa17.2■□□□□ 0.34
PDLIM3-202ENST00000284770 SNPHO15079 494 aa17.2■□□□□ 0.34
PDLIM3-202ENST00000284770 TRIM3O75382 744 aaPredicted RBP17.2■□□□□ 0.34
PDLIM3-202ENST00000284770 RPSAP08865 295 aaKnown RBP17.2■□□□□ 0.34
PDLIM3-202ENST00000284770 ANXA8P13928 327 aa17.2■□□□□ 0.34
PDLIM3-202ENST00000284770 CBLP22681 906 aa17.2■□□□□ 0.34
PDLIM3-202ENST00000284770 CAPGP40121 348 aa17.2■□□□□ 0.34
PDLIM3-202ENST00000284770 MASP1P48740 699 aa17.2■□□□□ 0.34
PDLIM3-202ENST00000284770 DNASE1L1P49184 302 aa17.2■□□□□ 0.34
PDLIM3-202ENST00000284770 TMPRSS3P57727 454 aa17.2■□□□□ 0.34
PDLIM3-202ENST00000284770 ARG2P78540 354 aa17.2■□□□□ 0.34
PDLIM3-202ENST00000284770 QPRTQ15274 297 aa17.2■□□□□ 0.34
PDLIM3-202ENST00000284770 MDS2Q8NDY4 140 aa17.2■□□□□ 0.34
PDLIM3-202ENST00000284770 OR1J4Q8NGS1 313 aa17.2■□□□□ 0.34
PDLIM3-202ENST00000284770 C3orf49Q96BT1 292 aa17.2■□□□□ 0.34
PDLIM3-202ENST00000284770 MPP4Q96JB8 637 aa17.2■□□□□ 0.34
PDLIM3-202ENST00000284770 SMAD5Q99717 465 aaKnown RBP17.2■□□□□ 0.34
PDLIM3-202ENST00000284770 ADAM19Q9H013 955 aa17.2■□□□□ 0.34
PDLIM3-202ENST00000284770 PTGES2Q9H7Z7 377 aa17.2■□□□□ 0.34
PDLIM3-202ENST00000284770 DEPPQ9NTK1 212 aa17.2■□□□□ 0.34
PDLIM3-202ENST00000284770 TAS2R10Q9NYW0 307 aa17.2■□□□□ 0.34
PDLIM3-202ENST00000284770 UBAP1Q9NZ09 502 aa17.2■□□□□ 0.34
PDLIM3-202ENST00000284770 KIF17Q9P2E2 1029 aa17.2■□□□□ 0.34
PDLIM3-202ENST00000284770 FBXL2Q9UKC9 423 aa17.2■□□□□ 0.34
PDLIM3-202ENST00000284770 URB1O60287 2271 aaKnown RBP17.19■□□□□ 0.34
PDLIM3-202ENST00000284770 A0A087WUU8 490 aa17.19■□□□□ 0.34
PDLIM3-202ENST00000284770 GNB5O14775 395 aa17.19■□□□□ 0.34
PDLIM3-202ENST00000284770 GNAO1P09471 354 aa17.19■□□□□ 0.34
PDLIM3-202ENST00000284770 GP1BBP13224 206 aa17.19■□□□□ 0.34
PDLIM3-202ENST00000284770 RAD23AP54725 363 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms