RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 HNRNPCL2B2RXH8 293 aa16.95■□□□□ 0.3
PDLIM3-201ENST00000284767 HNRNPCL3B7ZW38 293 aa16.95■□□□□ 0.3
PDLIM3-201ENST00000284767 CHP2O43745 196 aa16.95■□□□□ 0.3
PDLIM3-201ENST00000284767 HNRNPCL4P0DMR1 293 aa16.95■□□□□ 0.3
PDLIM3-201ENST00000284767 CD8BP10966 210 aa16.95■□□□□ 0.3
PDLIM3-201ENST00000284767 BCKDHBP21953 392 aa16.95■□□□□ 0.3
PDLIM3-201ENST00000284767 UQCRC1P31930 480 aa16.95■□□□□ 0.3
PDLIM3-201ENST00000284767 BDH1Q02338 343 aa16.95■□□□□ 0.3
PDLIM3-201ENST00000284767 TRAM2Q15035 370 aa16.95■□□□□ 0.3
PDLIM3-201ENST00000284767 TRMT12Q53H54 448 aaKnown RBP16.95■□□□□ 0.3
PDLIM3-201ENST00000284767 VASNQ6EMK4 673 aa16.95■□□□□ 0.3
PDLIM3-201ENST00000284767 LRRC25Q8N386 305 aaPredicted RBP16.95■□□□□ 0.3
PDLIM3-201ENST00000284767 SLC16A11Q8NCK7 471 aa16.95■□□□□ 0.3
PDLIM3-201ENST00000284767 OR5M3Q8NGP4 307 aa16.95■□□□□ 0.3
PDLIM3-201ENST00000284767 SPRYD4Q8WW59 207 aaPredicted RBP16.95■□□□□ 0.3
PDLIM3-201ENST00000284767 CCDC3Q9BQI4 270 aa16.95■□□□□ 0.3
PDLIM3-201ENST00000284767 CYSLTR2Q9NS75 346 aa16.95■□□□□ 0.3
PDLIM3-201ENST00000284767 POMT2Q9UKY4 750 aa16.95■□□□□ 0.3
PDLIM3-201ENST00000284767 PCDH15Q96QU1 1955 aa16.94■□□□□ 0.3
PDLIM3-201ENST00000284767 FRYLO94915 3013 aa16.94■□□□□ 0.3
PDLIM3-201ENST00000284767 LOC105371267A0A1B0GV96 52 aa16.94■□□□□ 0.3
PDLIM3-201ENST00000284767 SYT5O00445 386 aa16.94■□□□□ 0.3
PDLIM3-201ENST00000284767 SURF4O15260 269 aa16.94■□□□□ 0.3
PDLIM3-201ENST00000284767 FRS3O43559 492 aa16.94■□□□□ 0.3
PDLIM3-201ENST00000284767 FGF17O60258 216 aa16.94■□□□□ 0.3
PDLIM3-201ENST00000284767 DCNP07585 359 aaKnown RBP16.94■□□□□ 0.3
PDLIM3-201ENST00000284767 PRR5P85299 388 aa16.94■□□□□ 0.3
PDLIM3-201ENST00000284767 ARMC6Q6NXE6 501 aa16.94■□□□□ 0.3
PDLIM3-201ENST00000284767 TMEM91Q6ZNR0 172 aa16.94■□□□□ 0.3
PDLIM3-201ENST00000284767 LRRC17Q8N6Y2 441 aa16.94■□□□□ 0.3
PDLIM3-201ENST00000284767 OR4M2Q8NGB6 313 aa16.94■□□□□ 0.3
PDLIM3-201ENST00000284767 OR4K14Q8NGD5 310 aa16.94■□□□□ 0.3
PDLIM3-201ENST00000284767 OR56A1Q8NGH5 318 aa16.94■□□□□ 0.3
PDLIM3-201ENST00000284767 SFXN5Q8TD22 340 aa16.94■□□□□ 0.3
PDLIM3-201ENST00000284767 RFT1Q96AA3 541 aa16.94■□□□□ 0.3
PDLIM3-201ENST00000284767 MED28Q9H204 178 aa16.94■□□□□ 0.3
PDLIM3-201ENST00000284767 ANKRD19PQ9H560 264 aa16.94■□□□□ 0.3
PDLIM3-201ENST00000284767 RANBP3Q9H6Z4 567 aaPredicted RBP16.94■□□□□ 0.3
PDLIM3-201ENST00000284767 MRPS17Q9Y2R5 130 aaKnown RBP16.94■□□□□ 0.3
PDLIM3-201ENST00000284767 A0A0A6YYJ9 748 aa16.94■□□□□ 0.3
PDLIM3-201ENST00000284767 C2orf92A0A1B0GVN3 265 aa16.94■□□□□ 0.3
PDLIM3-201ENST00000284767 FAM221BA6H8Z2 402 aa16.94■□□□□ 0.3
PDLIM3-201ENST00000284767 URADA6NGE7 173 aa16.94■□□□□ 0.3
PDLIM3-201ENST00000284767 FABP7O15540 132 aa16.94■□□□□ 0.3
PDLIM3-201ENST00000284767 RGS9O75916 674 aaPredicted RBP16.94■□□□□ 0.3
PDLIM3-201ENST00000284767 ZIC2O95409 532 aaPredicted RBP16.94■□□□□ 0.3
PDLIM3-201ENST00000284767 DHFRP00374 187 aa16.94■□□□□ 0.3
PDLIM3-201ENST00000284767 NME1P15531 152 aaKnown RBP16.94■□□□□ 0.3
PDLIM3-201ENST00000284767 HTR1FP30939 366 aa16.94■□□□□ 0.3
PDLIM3-201ENST00000284767 TALDO1P37837 337 aa16.94■□□□□ 0.3
PDLIM3-201ENST00000284767 CSNK1EP49674 416 aaKnown RBP16.94■□□□□ 0.3
PDLIM3-201ENST00000284767 STARD6P59095 220 aa16.94■□□□□ 0.3
PDLIM3-201ENST00000284767 MAP4K2Q12851 820 aa16.94■□□□□ 0.3
PDLIM3-201ENST00000284767 IKZF1Q13422 519 aa16.94■□□□□ 0.3
PDLIM3-201ENST00000284767 ZNF791Q3KP31 576 aaPredicted RBP16.94■□□□□ 0.3
PDLIM3-201ENST00000284767 CLEC12AQ5QGZ9 265 aa16.94■□□□□ 0.3
PDLIM3-201ENST00000284767 PRAMEF8Q5VWM4 474 aa16.94■□□□□ 0.3
PDLIM3-201ENST00000284767 PRAMEF7Q5VXH5 474 aa16.94■□□□□ 0.3
PDLIM3-201ENST00000284767 HBMQ6B0K9 141 aa16.94■□□□□ 0.3
PDLIM3-201ENST00000284767 ZNF322Q6U7Q0 402 aaPredicted RBP16.94■□□□□ 0.3
PDLIM3-201ENST00000284767 MEX3DQ86XN8 651 aaKnown RBP16.94■□□□□ 0.3
PDLIM3-201ENST00000284767 OR8H1Q8NGG4 311 aa16.94■□□□□ 0.3
PDLIM3-201ENST00000284767 PIGXQ8TBF5 258 aa16.94■□□□□ 0.3
PDLIM3-201ENST00000284767 KCTD12Q96CX2 325 aaKnown RBP16.94■□□□□ 0.3
PDLIM3-201ENST00000284767 MAP3K3Q99759 626 aa16.94■□□□□ 0.3
PDLIM3-201ENST00000284767 EMC7Q9NPA0 242 aa16.94■□□□□ 0.3
PDLIM3-201ENST00000284767 UCKL1Q9NWZ5 548 aa16.94■□□□□ 0.3
PDLIM3-201ENST00000284767 PTTG3PQ9NZH4 202 aa16.94■□□□□ 0.3
PDLIM3-201ENST00000284767 ELF5Q9UKW6 265 aaPredicted RBP16.94■□□□□ 0.3
PDLIM3-201ENST00000284767 LINC00862A6NCI5 91 aa16.93■□□□□ 0.3
PDLIM3-201ENST00000284767 FCMRO60667 390 aa16.93■□□□□ 0.3
PDLIM3-201ENST00000284767 FOSL2P15408 326 aa16.93■□□□□ 0.3
PDLIM3-201ENST00000284767 RBMS1P29558 406 aaKnown RBP16.93■□□□□ 0.3
PDLIM3-201ENST00000284767 STAT5AP42229 794 aa16.93■□□□□ 0.3
PDLIM3-201ENST00000284767 OMPP47874 163 aa16.93■□□□□ 0.3
PDLIM3-201ENST00000284767 INSL4Q14641 139 aa16.93■□□□□ 0.3
PDLIM3-201ENST00000284767 HACD4Q5VWC8 232 aa16.93■□□□□ 0.3
PDLIM3-201ENST00000284767 FAM205BPQ63HN1 556 aa16.93■□□□□ 0.3
PDLIM3-201ENST00000284767 IDO2Q6ZQW0 420 aa16.93■□□□□ 0.3
PDLIM3-201ENST00000284767 OR9A4Q8NGU2 314 aa16.93■□□□□ 0.3
PDLIM3-201ENST00000284767 SECISBP2Q96T21 854 aaKnown RBP16.93■□□□□ 0.3
PDLIM3-201ENST00000284767 THAP7Q9BT49 309 aaPredicted RBP16.93■□□□□ 0.3
PDLIM3-201ENST00000284767 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.93■□□□□ 0.3
PDLIM3-201ENST00000284767 CNIH4Q9P003 139 aa16.93■□□□□ 0.3
PDLIM3-201ENST00000284767 C7orf66A4D0T2 115 aa16.93■□□□□ 0.3
PDLIM3-201ENST00000284767 GTPBP1O00178 669 aaKnown RBP16.93■□□□□ 0.3
PDLIM3-201ENST00000284767 RDH16O75452 317 aa16.93■□□□□ 0.3
PDLIM3-201ENST00000284767 IFI30P13284 250 aa16.93■□□□□ 0.3
PDLIM3-201ENST00000284767 RFX3P48380 749 aa16.93■□□□□ 0.3
PDLIM3-201ENST00000284767 RNF144AP50876 292 aaPredicted RBP16.93■□□□□ 0.3
PDLIM3-201ENST00000284767 PER3P56645 1201 aa16.93■□□□□ 0.3
PDLIM3-201ENST00000284767 DMWDQ09019 674 aa16.93■□□□□ 0.3
PDLIM3-201ENST00000284767 FCN2Q15485 313 aa16.93■□□□□ 0.3
PDLIM3-201ENST00000284767 IDNKQ5T6J7 187 aa16.93■□□□□ 0.3
PDLIM3-201ENST00000284767 BHLHB9Q6PI77 547 aa16.93■□□□□ 0.3
PDLIM3-201ENST00000284767 RRM2BQ7LG56 351 aa16.93■□□□□ 0.3
PDLIM3-201ENST00000284767 OR4Q3Q8NH05 313 aa16.93■□□□□ 0.3
PDLIM3-201ENST00000284767 SLC35A4Q96G79 324 aa16.93■□□□□ 0.3
PDLIM3-201ENST00000284767 FAM46AQ96IP4 442 aaKnown RBP16.93■□□□□ 0.3
PDLIM3-201ENST00000284767 WDR87Q6ZQQ6 2873 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms