RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 FESP07332 822 aa11.32□□□□□ -0.6
CD44-203ENST00000278386 BPGMP07738 259 aa11.32□□□□□ -0.6
CD44-203ENST00000278386 PGCP20142 388 aa11.32□□□□□ -0.6
CD44-203ENST00000278386 OR3A2P47893 321 aa11.32□□□□□ -0.6
CD44-203ENST00000278386 CASP9P55211 416 aa11.32□□□□□ -0.6
CD44-203ENST00000278386 MERTKQ12866 999 aa11.32□□□□□ -0.6
CD44-203ENST00000278386 SKP2Q13309 424 aa11.32□□□□□ -0.6
CD44-203ENST00000278386 TNK1Q13470 666 aa11.32□□□□□ -0.6
CD44-203ENST00000278386 P2RY6Q15077 328 aa11.32□□□□□ -0.6
CD44-203ENST00000278386 CLEC12BQ2HXU8 276 aa11.32□□□□□ -0.6
CD44-203ENST00000278386 ZNF672Q499Z4 452 aaPredicted RBP11.32□□□□□ -0.6
CD44-203ENST00000278386 SLC25A53Q5H9E4 307 aa11.32□□□□□ -0.6
CD44-203ENST00000278386 Q6ZT83 130 aa11.32□□□□□ -0.6
CD44-203ENST00000278386 C6orf120Q7Z4R8 191 aa11.32□□□□□ -0.6
CD44-203ENST00000278386 ATG4DQ86TL0 474 aaPredicted RBP11.32□□□□□ -0.6
CD44-203ENST00000278386 RIMKLAQ8IXN7 391 aa11.32□□□□□ -0.6
CD44-203ENST00000278386 CLEC4FQ8N1N0 589 aa11.32□□□□□ -0.6
CD44-203ENST00000278386 MAPK1IP1LQ8NDC0 245 aa11.32□□□□□ -0.6
CD44-203ENST00000278386 ST8SIA1Q92185 356 aa11.32□□□□□ -0.6
CD44-203ENST00000278386 ZNF775Q96BV0 537 aaPredicted RBP11.32□□□□□ -0.6
CD44-203ENST00000278386 PKNOX2Q96KN3 472 aa11.32□□□□□ -0.6
CD44-203ENST00000278386 ZNF300Q96RE9 604 aaPredicted RBP11.32□□□□□ -0.6
CD44-203ENST00000278386 THUMPD3Q9BV44 507 aaKnown RBP11.32□□□□□ -0.6
CD44-203ENST00000278386 SERHL2Q9H4I8 314 aa11.32□□□□□ -0.6
CD44-203ENST00000278386 BCO1Q9HAY6 547 aa11.32□□□□□ -0.6
CD44-203ENST00000278386 SERINC1Q9NRX5 453 aa11.32□□□□□ -0.6
CD44-203ENST00000278386 EXD2Q9NVH0 621 aa11.32□□□□□ -0.6
CD44-203ENST00000278386 MKLN1Q9UL63 735 aa11.32□□□□□ -0.6
CD44-203ENST00000278386 PCDHGB4Q9UN71 923 aa11.32□□□□□ -0.6
CD44-203ENST00000278386 MAGED1Q9Y5V3 778 aaPredicted RBP11.32□□□□□ -0.6
CD44-203ENST00000278386 JMJD1CQ15652 2540 aa11.31□□□□□ -0.6
CD44-203ENST00000278386 CENPVL1A0A0U1RR11 272 aa11.31□□□□□ -0.6
CD44-203ENST00000278386 KIAA1324LA8MWY0 1029 aaPredicted RBP11.31□□□□□ -0.6
CD44-203ENST00000278386 ZNF814B7Z6K7 855 aa11.31□□□□□ -0.6
CD44-203ENST00000278386 RNF223E7ERA6 249 aa11.31□□□□□ -0.6
CD44-203ENST00000278386 SMAD9O15198 467 aaKnown RBP11.31□□□□□ -0.6
CD44-203ENST00000278386 CYTIPO60759 359 aa11.31□□□□□ -0.6
CD44-203ENST00000278386 SOD3P08294 240 aa11.31□□□□□ -0.6
CD44-203ENST00000278386 TFPIP10646 304 aa11.31□□□□□ -0.6
CD44-203ENST00000278386 CDH11P55287 796 aa11.31□□□□□ -0.6
CD44-203ENST00000278386 CSNK2A1P68400 391 aaPredicted RBP11.31□□□□□ -0.6
CD44-203ENST00000278386 DMTNQ08495 405 aa11.31□□□□□ -0.6
CD44-203ENST00000278386 PPA1Q15181 289 aa11.31□□□□□ -0.6
CD44-203ENST00000278386 SYT14P1Q58G82 188 aa11.31□□□□□ -0.6
CD44-203ENST00000278386 ATAD3BQ5T9A4 648 aa11.31□□□□□ -0.6
CD44-203ENST00000278386 TNFAIP8L2Q6P589 184 aaPredicted RBP11.31□□□□□ -0.6
CD44-203ENST00000278386 EIF3MQ7L2H7 374 aaKnown RBP11.31□□□□□ -0.6
CD44-203ENST00000278386 ANKRD46Q86W74 232 aa11.31□□□□□ -0.6
CD44-203ENST00000278386 NUDCD3Q8IVD9 361 aa11.31□□□□□ -0.6
CD44-203ENST00000278386 ZNF100Q8IYN0 542 aa11.31□□□□□ -0.6
CD44-203ENST00000278386 LILRB1Q8NHL6 650 aaPredicted RBP11.31□□□□□ -0.6
CD44-203ENST00000278386 ZNF563Q8TA94 476 aa11.31□□□□□ -0.6
CD44-203ENST00000278386 SMAP2Q8WU79 429 aaPredicted RBP11.31□□□□□ -0.6
CD44-203ENST00000278386 TMEM234Q8WY98 164 aa11.31□□□□□ -0.6
CD44-203ENST00000278386 ZNF524Q96C55 264 aa11.31□□□□□ -0.6
CD44-203ENST00000278386 USB1Q9BQ65 265 aaKnown RBP11.31□□□□□ -0.6
CD44-203ENST00000278386 DPY30Q9C005 99 aa11.31□□□□□ -0.6
CD44-203ENST00000278386 ZNF350Q9GZX5 532 aa11.31□□□□□ -0.6
CD44-203ENST00000278386 LAT2Q9GZY6 243 aa11.31□□□□□ -0.6
CD44-203ENST00000278386 OR51I1Q9H343 314 aa11.31□□□□□ -0.6
CD44-203ENST00000278386 EMC3Q9P0I2 261 aa11.31□□□□□ -0.6
CD44-203ENST00000278386 SPIN1Q9Y657 262 aaPredicted RBP11.31□□□□□ -0.6
CD44-203ENST00000278386 WDR91A4D1P6 747 aa11.3□□□□□ -0.6
CD44-203ENST00000278386 ESPNB1AK53 854 aa11.3□□□□□ -0.6
CD44-203ENST00000278386 SULT2B1O00204 365 aa11.3□□□□□ -0.6
CD44-203ENST00000278386 ETV2O00321 342 aaPredicted RBP11.3□□□□□ -0.6
CD44-203ENST00000278386 RNASET2O00584 256 aaKnown RBP11.3□□□□□ -0.6
CD44-203ENST00000278386 KIAA0513O60268 411 aa11.3□□□□□ -0.6
CD44-203ENST00000278386 UGT2B17O75795 530 aa11.3□□□□□ -0.6
CD44-203ENST00000278386 CPSF4O95639 269 aaKnown RBP11.3□□□□□ -0.6
CD44-203ENST00000278386 OR12D1P0DN82 309 aa11.3□□□□□ -0.6
CD44-203ENST00000278386 CREB1P16220 341 aa11.3□□□□□ -0.6
CD44-203ENST00000278386 GGT1P19440 569 aa11.3□□□□□ -0.6
CD44-203ENST00000278386 IDUAP35475 653 aa11.3□□□□□ -0.6
CD44-203ENST00000278386 DIO1P49895 249 aa11.3□□□□□ -0.6
CD44-203ENST00000278386 KHKP50053 298 aa11.3□□□□□ -0.6
CD44-203ENST00000278386 CLDN8P56748 225 aa11.3□□□□□ -0.6
CD44-203ENST00000278386 SESN3P58005 492 aa11.3□□□□□ -0.6
CD44-203ENST00000278386 C21orf58P58505 322 aa11.3□□□□□ -0.6
CD44-203ENST00000278386 VSNL1P62760 191 aa11.3□□□□□ -0.6
CD44-203ENST00000278386 HPCAP84074 193 aa11.3□□□□□ -0.6
CD44-203ENST00000278386 EMX2Q04743 252 aa11.3□□□□□ -0.6
CD44-203ENST00000278386 ZNF141Q15928 474 aa11.3□□□□□ -0.6
CD44-203ENST00000278386 ETFDHQ16134 617 aa11.3□□□□□ -0.6
CD44-203ENST00000278386 ARHGAP11BQ3KRB8 267 aa11.3□□□□□ -0.6
CD44-203ENST00000278386 GALNT5Q7Z7M9 940 aa11.3□□□□□ -0.6
CD44-203ENST00000278386 UBE2J2Q8N2K1 259 aa11.3□□□□□ -0.6
CD44-203ENST00000278386 ZNF781Q8N8C0 355 aa11.3□□□□□ -0.6
CD44-203ENST00000278386 PIWIL2Q8TC59 973 aaKnown RBP11.3□□□□□ -0.6
CD44-203ENST00000278386 SLC25A43Q8WUT9 341 aaPredicted RBP11.3□□□□□ -0.6
CD44-203ENST00000278386 MUCL1Q96DR8 90 aa11.3□□□□□ -0.6
CD44-203ENST00000278386 ZHX1-C8orf76Q96EF9 292 aa11.3□□□□□ -0.6
CD44-203ENST00000278386 DNAJA3Q96EY1 480 aa11.3□□□□□ -0.6
CD44-203ENST00000278386 HS6ST2Q96MM7 605 aa11.3□□□□□ -0.6
CD44-203ENST00000278386 ROPN1BQ9BZX4 212 aaPredicted RBP11.3□□□□□ -0.6
CD44-203ENST00000278386 ROPN1Q9HAT0 212 aaPredicted RBP11.3□□□□□ -0.6
CD44-203ENST00000278386 FAIMQ9NVQ4 179 aa11.3□□□□□ -0.6
CD44-203ENST00000278386 ASIC5Q9NY37 505 aa11.3□□□□□ -0.6
CD44-203ENST00000278386 KCNE5Q9UJ90 142 aa11.3□□□□□ -0.6
CD44-203ENST00000278386 ING1Q9UK53 422 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms