RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 UQCRFS1P47985 274 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 PCYT1AP49585 367 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 ART1P52961 327 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 MAZP56270 477 aaKnown RBP4.11□□□□□ -1.75
CD44-202ENST00000278385 PLP1P60201 277 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 RAB14P61106 215 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 SRSF4Q08170 494 aaKnown RBP4.11□□□□□ -1.75
CD44-202ENST00000278385 PNRC1Q12796 327 aaPredicted RBP4.11□□□□□ -1.75
CD44-202ENST00000278385 MYBPHQ13203 477 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 EXOSC7Q15024 291 aaKnown RBP4.11□□□□□ -1.75
CD44-202ENST00000278385 SFT2D3Q587I9 215 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 CT45A2Q5DJT8 189 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 PLPP4Q5VZY2 271 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 TMEM65Q6PI78 240 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 DOK6Q6PKX4 331 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 ZNF841Q6ZN19 808 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 GOLGA7Q7Z5G4 137 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 CPEB2Q7Z5Q1 589 aaKnown RBP4.11□□□□□ -1.75
CD44-202ENST00000278385 RBM23Q86U06 439 aaKnown RBP4.11□□□□□ -1.75
CD44-202ENST00000278385 SATL1Q86VE3 508 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 KMT5CQ86Y97 462 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 PTOV1Q86YD1 416 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 MFSD6LQ8IWD5 586 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 DCUN1D3Q8IWE4 304 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 ZBTB8OSQ8IWT0 167 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 BEST3Q8N1M1 668 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 PCDH20Q8N6Y1 951 aaKnown RBP4.11□□□□□ -1.75
CD44-202ENST00000278385 C4orf32Q8N8J7 132 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 CHDHQ8NE62 594 aaPredicted RBP4.11□□□□□ -1.75
CD44-202ENST00000278385 FBXO36Q8NEA4 188 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 TET1Q8NFU7 2136 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 SEMA6DQ8NFY4 1073 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 OR4D6Q8NGJ1 314 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 OR4D5Q8NGN0 318 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 OR13C3Q8NGS6 347 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 OR4L1Q8NH43 312 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 CCDC26Q8TAB7 109 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 HCAR2Q8TDS4 363 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 GTF2H4Q92759 462 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 OTULINQ96BN8 352 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 CCDC127Q96BQ5 260 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 SLC25A36Q96CQ1 311 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 C10orf35Q96D05 121 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 PELI1Q96FA3 418 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 MED30Q96HR3 178 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 ZFYVE19Q96K21 471 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 COPS8Q99627 209 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 LRRC1Q9BTT6 524 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 FUNDC2Q9BWH2 189 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 PRRG4Q9BZD6 226 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 OR2B2Q9GZK3 357 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 MIS12Q9H081 205 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 KAT8Q9H7Z6 458 aaKnown RBP4.11□□□□□ -1.75
CD44-202ENST00000278385 LPAR2Q9HBW0 351 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 ADAP2Q9NPF8 381 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 NOX4Q9NPH5 578 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 XPNPEP1Q9NQW7 623 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 POLE4Q9NR33 117 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 LYARQ9NX58 379 aaKnown RBP4.11□□□□□ -1.75
CD44-202ENST00000278385 NPAP1Q9NZP6 1156 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 LRWD1Q9UFC0 647 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 SLC7A8Q9UHI5 535 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 UTS2RQ9UKP6 389 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 TANC1Q9C0D5 1861 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 MYH7BA7E2Y1 1941 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 SCN5AQ14524 2016 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 A0A087WWV3 80 aa4.1□□□□□ -1.75
CD44-202ENST00000278385 ANTXRLA6NF34 631 aa4.1□□□□□ -1.75
CD44-202ENST00000278385 HIDE1A8MVS5 230 aa4.1□□□□□ -1.75
CD44-202ENST00000278385 ZNF99A8MXY4 864 aaPredicted RBP4.1□□□□□ -1.75
CD44-202ENST00000278385 GOLGA8KD6RF30 607 aa4.1□□□□□ -1.75
CD44-202ENST00000278385 E9PQ18 207 aa4.1□□□□□ -1.75
CD44-202ENST00000278385 CLIC1O00299 241 aa4.1□□□□□ -1.75
CD44-202ENST00000278385 HAT1O14929 419 aa4.1□□□□□ -1.75
CD44-202ENST00000278385 LINC01565O15544 149 aa4.1□□□□□ -1.75
CD44-202ENST00000278385 TPST2O60704 377 aa4.1□□□□□ -1.75
CD44-202ENST00000278385 LRCH4O75427 683 aa4.1□□□□□ -1.75
CD44-202ENST00000278385 GRAP2O75791 330 aa4.1□□□□□ -1.75
CD44-202ENST00000278385 BRI3O95415 125 aa4.1□□□□□ -1.75
CD44-202ENST00000278385 TXNDC12O95881 172 aa4.1□□□□□ -1.75
CD44-202ENST00000278385 BMP15O95972 392 aa4.1□□□□□ -1.75
CD44-202ENST00000278385 HPRP00739 348 aa4.1□□□□□ -1.75
CD44-202ENST00000278385 EGFP01133 1207 aa4.1□□□□□ -1.75
CD44-202ENST00000278385 PIGRP01833 764 aa4.1□□□□□ -1.75
CD44-202ENST00000278385 ATP1B2P14415 290 aaPredicted RBP4.1□□□□□ -1.75
CD44-202ENST00000278385 GJB2P29033 226 aa4.1□□□□□ -1.75
CD44-202ENST00000278385 PPP2R1BP30154 601 aa4.1□□□□□ -1.75
CD44-202ENST00000278385 SRD5A2P31213 254 aa4.1□□□□□ -1.75
CD44-202ENST00000278385 CDKN2CP42773 168 aa4.1□□□□□ -1.75
CD44-202ENST00000278385 PLA2G16P53816 162 aa4.1□□□□□ -1.75
CD44-202ENST00000278385 NAAAQ02083 359 aa4.1□□□□□ -1.75
CD44-202ENST00000278385 STX5Q13190 355 aa4.1□□□□□ -1.75
CD44-202ENST00000278385 SNTA1Q13424 505 aa4.1□□□□□ -1.75
CD44-202ENST00000278385 PEX6Q13608 980 aa4.1□□□□□ -1.75
CD44-202ENST00000278385 SPHARQ15513 63 aa4.1□□□□□ -1.75
CD44-202ENST00000278385 EFNB3Q15768 340 aa4.1□□□□□ -1.75
CD44-202ENST00000278385 UAP1Q16222 522 aaPredicted RBP4.1□□□□□ -1.75
CD44-202ENST00000278385 MRPL23Q16540 153 aaKnown RBP4.1□□□□□ -1.75
CD44-202ENST00000278385 SGCAQ16586 387 aa4.1□□□□□ -1.75
CD44-202ENST00000278385 MOGQ16653 247 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms