RNA–Protein interactions for RNA: ENST00000277537.10

SEC16A-201, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 3,910 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-201ENST00000277537 H3BML4 177 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 SNPHO15079 494 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 AHSA1O95433 338 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 PEPDP12955 493 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 GLB1P16278 677 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 NXPH1P58417 271 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 SNRPNP63162 240 aaKnown RBP8.31□□□□□ -1.08
SEC16A-201ENST00000277537 PRICKLE4Q2TBC4 344 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 LEG1Q6P5S2 330 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 OR6N2Q8NGY6 317 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 RHBDD1Q8TEB9 315 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 SCARF2Q96GP6 870 aaPredicted RBP8.31□□□□□ -1.08
SEC16A-201ENST00000277537 STACQ99469 402 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 CDADC1Q9BWV3 514 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 NXF5Q9H1B4 397 aaKnown RBP8.31□□□□□ -1.08
SEC16A-201ENST00000277537 KCNN2Q9H2S1 579 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 SLC22A31A6NKX4 558 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 A6NL46 340 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 TNFSF14O43557 240 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 TSC22D2O75157 780 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 GABARAPO95166 117 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 RENP00797 406 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 MT-ND5P03915 603 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 ATP1B1P05026 303 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 ZNF12P17014 697 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 EIF1AXP47813 144 aaKnown RBP8.31□□□□□ -1.08
SEC16A-201ENST00000277537 HMGA2P52926 109 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 GBX2P52951 348 aaPredicted RBP8.31□□□□□ -1.08
SEC16A-201ENST00000277537 KRR1Q13601 381 aaKnown RBP8.31□□□□□ -1.08
SEC16A-201ENST00000277537 FAM53BQ14153 422 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 BTBD16Q32M84 506 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 TP53I3Q53FA7 332 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 C1orf94Q6P1W5 598 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 ZCCHC12Q6PEW1 402 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 DGAT2L6Q6ZPD8 337 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 DCDC5Q6ZRR9 648 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 GPAT4Q86UL3 456 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 PPP1R3BQ86XI6 285 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 CADM4Q8NFZ8 388 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 OR52I1Q8NGK6 324 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 DUSP19Q8WTR2 217 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 ZFP3Q96NJ6 502 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 DUSP23Q9BVJ7 150 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 ALG8Q9BVK2 526 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 FN3KQ9H479 309 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 RPRD1BQ9NQG5 326 aaKnown RBP8.31□□□□□ -1.08
SEC16A-201ENST00000277537 STUB1Q9UNE7 303 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 GMEB1Q9Y692 573 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 CEP250Q9BV73 2442 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 IGHV1OR21-1A0A087WYE8 117 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 H7C1C5 153 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 CYR61O00622 381 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 CSO75390 466 aaKnown RBP8.3□□□□□ -1.08
SEC16A-201ENST00000277537 FPR3P25089 353 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 SDC2P34741 201 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 RPS5P46782 204 aaKnown RBP8.3□□□□□ -1.08
SEC16A-201ENST00000277537 SOX2P48431 317 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 LCN6P62502 163 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 PRAMEF8Q5VWM4 474 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 PRAMEF7Q5VXH5 474 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 LAIR1Q6GTX8 287 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 NUP54Q7Z3B4 507 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 SLC46A3Q7Z3Q1 461 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 MARCH3Q86UD3 253 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.3□□□□□ -1.08
SEC16A-201ENST00000277537 BCORP1Q8N888 145 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 OR8K3Q8NH51 312 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 DNAJA4Q8WW22 397 aaPredicted RBP8.3□□□□□ -1.08
SEC16A-201ENST00000277537 C8orf44Q96CB5 159 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 LMF1Q96S06 567 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 SLITRK2Q9H156 845 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 SMOC1Q9H4F8 434 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 C20orf141Q9NUB4 165 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 PPIEQ9UNP9 301 aaKnown RBP8.3□□□□□ -1.08
SEC16A-201ENST00000277537 YARS2Q9Y2Z4 477 aaKnown RBP8.3□□□□□ -1.08
SEC16A-201ENST00000277537 A0A087WV62 115 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 ZNF264O43296 627 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 PPM1BO75688 479 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 UTS2O95399 124 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 GSTT2P0CG29 244 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 GSTT2BP0CG30 244 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 ARFIP1P53367 373 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 FUT5Q11128 374 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 RAB40BQ12829 278 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 TAF13Q15543 124 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 LCN1P1Q5VSP4 162 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 GUSBP11Q6P575 273 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 DHRS4L2Q6PKH6 230 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 TSEN54Q7Z6J9 526 aaKnown RBP8.3□□□□□ -1.08
SEC16A-201ENST00000277537 YIPF7Q8N8F6 280 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 DIO2Q92813 273 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 LCORQ96JN0 433 aaPredicted RBP8.3□□□□□ -1.08
SEC16A-201ENST00000277537 GPA33Q99795 319 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 SLC30A2Q9BRI3 323 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 HINT3Q9NQE9 182 aaKnown RBP8.3□□□□□ -1.08
SEC16A-201ENST00000277537 PRDM9Q9NQV7 894 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 CENPMQ9NSP4 180 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 CTSFQ9UBX1 484 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 A0A1B0GX78 115 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 CDHR4A6H8M9 788 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms