RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 C9orf40Q8IXQ3 194 aa8.8□□□□□ -1
TRIM55-201ENST00000276573 SLC15A4Q8N697 577 aa8.8□□□□□ -1
TRIM55-201ENST00000276573 GATSQ8NAP1 163 aa8.8□□□□□ -1
TRIM55-201ENST00000276573 BBS1Q8NFJ9 593 aa8.8□□□□□ -1
TRIM55-201ENST00000276573 OR2I1PQ8NGU4 316 aa8.8□□□□□ -1
TRIM55-201ENST00000276573 CEP76Q8TAP6 659 aa8.8□□□□□ -1
TRIM55-201ENST00000276573 STT3BQ8TCJ2 826 aa8.8□□□□□ -1
TRIM55-201ENST00000276573 PHOSPHO1Q8TCT1 267 aa8.8□□□□□ -1
TRIM55-201ENST00000276573 SH3YL1Q96HL8 342 aaPredicted RBP8.8□□□□□ -1
TRIM55-201ENST00000276573 ADOQ96SZ5 270 aa8.8□□□□□ -1
TRIM55-201ENST00000276573 CHCHD6Q9BRQ6 235 aa8.8□□□□□ -1
TRIM55-201ENST00000276573 CENPOQ9BU64 300 aa8.8□□□□□ -1
TRIM55-201ENST00000276573 IFT27Q9BW83 186 aa8.8□□□□□ -1
TRIM55-201ENST00000276573 SLIRPQ9GZT3 109 aaKnown RBP8.8□□□□□ -1
TRIM55-201ENST00000276573 FN3KQ9H479 309 aa8.8□□□□□ -1
TRIM55-201ENST00000276573 OCEL1Q9H607 264 aa8.8□□□□□ -1
TRIM55-201ENST00000276573 ZBTB20Q9HC78 741 aaPredicted RBP8.8□□□□□ -1
TRIM55-201ENST00000276573 RARRES3Q9UL19 164 aa8.8□□□□□ -1
TRIM55-201ENST00000276573 EXOSC1Q9Y3B2 195 aaKnown RBP8.8□□□□□ -1
TRIM55-201ENST00000276573 NUP210LQ5VU65 1888 aa8.8□□□□□ -1
TRIM55-201ENST00000276573 ADAMTS20P59510 1910 aa8.8□□□□□ -1
TRIM55-201ENST00000276573 CACNA1EQ15878 2313 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 TRAV27A0A087WT01 109 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.79□□□□□ -1
TRIM55-201ENST00000276573 TMEM129A0AVI4 362 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 SYNDIG1LA6NDD5 238 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 OR6C76A6NM76 312 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 AGRPO00253 132 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 SOCS6O14544 535 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 GNB5O14775 395 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 TSPAN2O60636 221 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 GPX5O75715 221 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 TIAF1O95411 115 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 UBL4AP11441 157 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 MYL12AP19105 171 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 ENDOUP21128 410 aaKnown RBP8.79□□□□□ -1
TRIM55-201ENST00000276573 HOXD12P35452 270 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 NR0B1P51843 470 aaKnown RBP8.79□□□□□ -1
TRIM55-201ENST00000276573 CRYZQ08257 329 aaKnown RBP8.79□□□□□ -1
TRIM55-201ENST00000276573 NKAIN1Q4KMZ8 207 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 ZNF362Q5T0B9 420 aaPredicted RBP8.79□□□□□ -1
TRIM55-201ENST00000276573 FAAH2Q6GMR7 532 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 DESI1Q6ICB0 168 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 WBP2NLQ6ICG8 309 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 PWWP2BQ6NUJ5 590 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 SHISA6Q6ZSJ9 500 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 LANCL3Q6ZV70 420 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 MEPCEQ7L2J0 689 aaKnown RBP8.79□□□□□ -1
TRIM55-201ENST00000276573 PRR22Q8IZ63 422 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 SLC43A2Q8N370 569 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 OR6Q1Q8NGQ2 317 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 PTP4A1Q93096 173 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 C3orf49Q96BT1 292 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 SGTBQ96EQ0 304 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 DTNBP1Q96EV8 351 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 CCDC74BQ96LY2 380 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 DACH2Q96NX9 599 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 GAL3ST4Q96RP7 486 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 CCNL2Q96S94 520 aaPredicted RBP8.79□□□□□ -1
TRIM55-201ENST00000276573 NRSN2Q9GZP1 204 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 WWTR1Q9GZV5 400 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 RNF167Q9H6Y7 350 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 ISYNA1Q9NPH2 558 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 EXOSC3Q9NQT5 275 aaKnown RBP8.79□□□□□ -1
TRIM55-201ENST00000276573 COPS7AQ9UBW8 275 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 BAIAP2Q9UQB8 552 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 CDC14CA4D256 554 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 FAM86C2PA6NEL3 165 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 FAM183AA6NL82 134 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 ZNF264O43296 627 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 PPM1BO75688 479 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 SCRG1O75711 98 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 ONECUT2O95948 504 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 LIMS3P0CW19 117 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 LIMS4P0CW20 117 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 SOX3P41225 446 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 WNT4P56705 351 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 SKP2Q13309 424 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 PLBD1Q6P4A8 553 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 CBLN3Q6UW01 205 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 GDPGP1Q6ZNW5 385 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 SHFQ7M4L6 423 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 SLC29A4Q7RTT9 530 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 OVCH1Q7RTY7 1134 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 GID4Q8IVV7 300 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 KBTBD8Q8NFY9 601 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 OR4F15Q8NGB8 312 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 IFI44Q8TCB0 444 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 OTULINQ96BN8 352 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 HSPBAP1Q96EW2 488 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 LAT2Q9GZY6 243 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 SYNDIG1Q9H7V2 258 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 MED20Q9H944 212 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 MCCC2Q9HCC0 563 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 FBXO8Q9NRD0 319 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 CMC2Q9NRP2 79 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 SEC14L4Q9UDX3 406 aa8.79□□□□□ -1
TRIM55-201ENST00000276573 PI4KAP42356 2102 aa8.78□□□□□ -1
TRIM55-201ENST00000276573 CLDN25C9JDP6 229 aa8.78□□□□□ -1
TRIM55-201ENST00000276573 WWP2O00308 870 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms