RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 TMEM202A6NGA9 273 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 HNRNPCL2B2RXH8 293 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 HNRNPCL3B7ZW38 293 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 YKT6O15498 198 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 ZNF749O43361 778 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 LANCL1O43813 399 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 SDC3O75056 442 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 UBL3O95164 117 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 MPC2O95563 127 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 EPPINO95925 133 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 HNRNPCL4P0DMR1 293 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 ACP5P13686 325 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 CELP19835 753 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 CD79BP40259 229 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 KHKP50053 298 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 NOVA1P51513 510 aaKnown RBP9.58□□□□□ -0.88
UPF3B-201ENST00000276201 MANFP55145 182 aaKnown RBP9.58□□□□□ -0.88
UPF3B-201ENST00000276201 YPEL5P62699 121 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 POU6F2P78424 691 aaPredicted RBP9.58□□□□□ -0.88
UPF3B-201ENST00000276201 EIF2B5Q13144 721 aaKnown RBP9.58□□□□□ -0.88
UPF3B-201ENST00000276201 ZNF542PQ5EBM4 170 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 FAM129CQ86XR2 697 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 GID4Q8IVV7 300 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 NRSN1Q8IZ57 195 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 RASGEF1AQ8N9B8 481 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 OR56B4Q8NH76 319 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 SUN3Q8TAQ9 357 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 SPRYD4Q8WW59 207 aaPredicted RBP9.58□□□□□ -0.88
UPF3B-201ENST00000276201 SLC9A6Q92581 669 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 SLC35G5Q96KT7 338 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 APOOQ9BUR5 198 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 TMED9Q9BVK6 235 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 TMPRSS13Q9BYE2 586 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 FN3KQ9H479 309 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 SERHL2Q9H4I8 314 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 ZNF222Q9UK12 451 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 PCOLCE2Q9UKZ9 415 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 A0A0G2JK05 382 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 PRAMEF27A3QJZ7 478 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 FLRT2O43155 660 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 TSC22D2O75157 780 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 NCR1O76036 304 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 TPPPO94811 219 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 TGM6O95932 706 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 EIF4EP06730 217 aaKnown RBP9.57□□□□□ -0.88
UPF3B-201ENST00000276201 ENPP1P22413 925 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 DNASE1P24855 282 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 CALCRP30988 508 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 BSGP35613 385 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 OMPP47874 163 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 TAS2R43P59537 309 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 DECR1Q16698 335 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 CDC73Q6P1J9 531 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 OVCH2Q7RTZ1 564 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 PARGQ86W56 976 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 GPR135Q8IZ08 494 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 SDR16C5Q8N3Y7 309 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 BAHD1Q8TBE0 780 aaPredicted RBP9.57□□□□□ -0.88
UPF3B-201ENST00000276201 HSD17B8Q92506 261 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 CCDC120Q96HB5 630 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 ERMAPQ96PL5 475 aaPredicted RBP9.57□□□□□ -0.88
UPF3B-201ENST00000276201 WFDC6Q9BQY6 131 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 REG4Q9BYZ8 158 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 PLEKHA1Q9HB21 404 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 BABAM2Q9NXR7 383 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 CD84Q9UIB8 345 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 SH2B3Q9UQQ2 575 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 PCNX2A6NKB5 2137 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 A0A087WUU8 490 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 hCG_1807616A0A1W2PRN6 198 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 SMIM30A4D0T7 59 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 SH3BGRLO75368 114 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 WDPCPO95876 746 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 H2AFB2P0C5Z0 115 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 NME1P15531 152 aaKnown RBP9.57□□□□□ -0.88
UPF3B-201ENST00000276201 TRIM23P36406 574 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 CCT3P49368 545 aaKnown RBP9.57□□□□□ -0.88
UPF3B-201ENST00000276201 NFATC4Q14934 902 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 POU4F3Q15319 338 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 PGGHGQ32M88 737 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 IDNKQ5T6J7 187 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 PXDC1Q5TGL8 231 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 GARNL3Q5VVW2 1013 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 PXKQ7Z7A4 578 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 LHFPL3Q86UP9 236 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 COMTD1Q86VU5 262 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 NR2C2APQ86WQ0 139 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 TIGD4Q8IY51 512 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 FAM98AQ8NCA5 519 aaKnown RBP9.57□□□□□ -0.88
UPF3B-201ENST00000276201 OR2T4Q8NH00 348 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 PIGXQ8TBF5 258 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 GLYATL1Q969I3 302 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 YIPF5Q969M3 257 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 MOAP1Q96BY2 351 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 DPCDQ9BVM2 203 aaPredicted RBP9.57□□□□□ -0.88
UPF3B-201ENST00000276201 C12orf4Q9NQ89 552 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 NUDT15Q9NV35 164 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 ABRACLQ9P1F3 81 aa9.57□□□□□ -0.88
UPF3B-201ENST00000276201 TRAV1-2A0A0B4J238 106 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 SPAARA0A1B0GVQ0 90 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms