RNA–Protein interactions for RNA: ENST00000272322.8

VPS54-201, Transcript of VPS54, GARP complex subunit, humanhuman

APPRIS P3 TSL 5 BASIC

Gene VPS54, Length 3,463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-201ENST00000272322 EEF1A1P68104 462 aaKnown RBP15.38■□□□□ 0.05
VPS54-201ENST00000272322 ARHGAP11BQ3KRB8 267 aa15.38■□□□□ 0.05
VPS54-201ENST00000272322 GLYR1Q49A26 553 aaPredicted RBP15.38■□□□□ 0.05
VPS54-201ENST00000272322 ZNF628Q5EBL2 1059 aa15.38■□□□□ 0.05
VPS54-201ENST00000272322 LINC00471Q8N535 108 aa15.38■□□□□ 0.05
VPS54-201ENST00000272322 OR5J2Q8NH18 312 aa15.38■□□□□ 0.05
VPS54-201ENST00000272322 FLVCR1-AS1Q8TAF5 88 aa15.38■□□□□ 0.05
VPS54-201ENST00000272322 TEAD3Q99594 435 aa15.38■□□□□ 0.05
VPS54-201ENST00000272322 NKX3-1Q99801 234 aaPredicted RBP15.38■□□□□ 0.05
VPS54-201ENST00000272322 FLRT3Q9NZU0 649 aa15.38■□□□□ 0.05
VPS54-201ENST00000272322 GTPBP1O00178 669 aaKnown RBP15.37■□□□□ 0.05
VPS54-201ENST00000272322 RPP14O95059 124 aaKnown RBP15.37■□□□□ 0.05
VPS54-201ENST00000272322 MYF5P13349 255 aa15.37■□□□□ 0.05
VPS54-201ENST00000272322 BNC1Q01954 994 aa15.37■□□□□ 0.05
VPS54-201ENST00000272322 KRR1Q13601 381 aaKnown RBP15.37■□□□□ 0.05
VPS54-201ENST00000272322 QPRTQ15274 297 aa15.37■□□□□ 0.05
VPS54-201ENST00000272322 SLC25A35Q3KQZ1 300 aa15.37■□□□□ 0.05
VPS54-201ENST00000272322 OOSP2Q86WS3 158 aa15.37■□□□□ 0.05
VPS54-201ENST00000272322 DNAJC5GQ8N7S2 189 aa15.37■□□□□ 0.05
VPS54-201ENST00000272322 POGLUT1Q8NBL1 392 aa15.37■□□□□ 0.05
VPS54-201ENST00000272322 OR4C3Q8NH37 302 aa15.37■□□□□ 0.05
VPS54-201ENST00000272322 ELSPBP1Q96BH3 223 aa15.37■□□□□ 0.05
VPS54-201ENST00000272322 TOE1Q96GM8 510 aaKnown RBP15.37■□□□□ 0.05
VPS54-201ENST00000272322 PDCD1LG2Q9BQ51 273 aa15.37■□□□□ 0.05
VPS54-201ENST00000272322 IQCMA0A1B0GVH7 501 aa15.37■□□□□ 0.05
VPS54-201ENST00000272322 CDHR4A6H8M9 788 aa15.37■□□□□ 0.05
VPS54-201ENST00000272322 FAM86C2PA6NEL3 165 aa15.37■□□□□ 0.05
VPS54-201ENST00000272322 OR5F1O95221 314 aa15.37■□□□□ 0.05
VPS54-201ENST00000272322 SEMA4FO95754 770 aa15.37■□□□□ 0.05
VPS54-201ENST00000272322 IGKV1D-16P01601 117 aa15.37■□□□□ 0.05
VPS54-201ENST00000272322 THEGLP0DJG4 465 aa15.37■□□□□ 0.05
VPS54-201ENST00000272322 NID1P14543 1247 aa15.37■□□□□ 0.05
VPS54-201ENST00000272322 IL9P15248 144 aa15.37■□□□□ 0.05
VPS54-201ENST00000272322 HTR1FP30939 366 aa15.37■□□□□ 0.05
VPS54-201ENST00000272322 ENPP2Q13822 863 aa15.37■□□□□ 0.05
VPS54-201ENST00000272322 VASNQ6EMK4 673 aa15.37■□□□□ 0.05
VPS54-201ENST00000272322 SCAIQ8N9R8 606 aa15.37■□□□□ 0.05
VPS54-201ENST00000272322 OR5W2Q8NH69 310 aa15.37■□□□□ 0.05
VPS54-201ENST00000272322 ATF6BQ99941 703 aa15.37■□□□□ 0.05
VPS54-201ENST00000272322 ORAI3Q9BRQ5 295 aa15.37■□□□□ 0.05
VPS54-201ENST00000272322 TMEM246Q9BRR3 403 aa15.37■□□□□ 0.05
VPS54-201ENST00000272322 FGF20Q9NP95 211 aaPredicted RBP15.37■□□□□ 0.05
VPS54-201ENST00000272322 SOHLH2Q9NX45 425 aa15.37■□□□□ 0.05
VPS54-201ENST00000272322 NKIRAS2Q9NYR9 191 aa15.37■□□□□ 0.05
VPS54-201ENST00000272322 C19orf53Q9UNZ5 99 aaPredicted RBP15.37■□□□□ 0.05
VPS54-201ENST00000272322 IER3IP1Q9Y5U9 82 aa15.37■□□□□ 0.05
VPS54-201ENST00000272322 IGFBP4P22692 258 aa15.37■□□□□ 0.05
VPS54-201ENST00000272322 PLAURQ03405 335 aa15.37■□□□□ 0.05
VPS54-201ENST00000272322 KCNAB1Q14722 419 aa15.37■□□□□ 0.05
VPS54-201ENST00000272322 KIR2DS3Q14952 304 aa15.37■□□□□ 0.05
VPS54-201ENST00000272322 TATDN3Q17R31 274 aa15.37■□□□□ 0.05
VPS54-201ENST00000272322 ZNF433Q8N7K0 673 aaPredicted RBP15.37■□□□□ 0.05
VPS54-201ENST00000272322 FRMD6Q96NE9 622 aa15.37■□□□□ 0.05
VPS54-201ENST00000272322 MAP3K3Q99759 626 aa15.37■□□□□ 0.05
VPS54-201ENST00000272322 NRSN2Q9GZP1 204 aa15.37■□□□□ 0.05
VPS54-201ENST00000272322 BABAM2Q9NXR7 383 aa15.37■□□□□ 0.05
VPS54-201ENST00000272322 EEF1E1O43324 174 aaKnown RBP15.36■□□□□ 0.05
VPS54-201ENST00000272322 SYPP08247 313 aa15.36■□□□□ 0.05
VPS54-201ENST00000272322 GABRG2P18507 467 aa15.36■□□□□ 0.05
VPS54-201ENST00000272322 LCN1P1Q5VSP4 162 aa15.36■□□□□ 0.05
VPS54-201ENST00000272322 NIPAL3Q6P499 406 aa15.36■□□□□ 0.05
VPS54-201ENST00000272322 MMABQ96EY8 250 aaPredicted RBP15.36■□□□□ 0.05
VPS54-201ENST00000272322 OBP2AQ9NY56 170 aa15.36■□□□□ 0.05
VPS54-201ENST00000272322 ERVK-19Q9WJR5 959 aa15.36■□□□□ 0.05
VPS54-201ENST00000272322 FANCMQ8IYD8 2048 aa15.36■□□□□ 0.05
VPS54-201ENST00000272322 RIIAD1A6NNX1 92 aa15.36■□□□□ 0.05
VPS54-201ENST00000272322 H7C1C5 153 aa15.36■□□□□ 0.05
VPS54-201ENST00000272322 CPNE3O75131 537 aaKnown RBP15.36■□□□□ 0.05
VPS54-201ENST00000272322 HMGN1P05114 100 aa15.36■□□□□ 0.05
VPS54-201ENST00000272322 ENDOUP21128 410 aaKnown RBP15.36■□□□□ 0.05
VPS54-201ENST00000272322 NDUFS1P28331 727 aa15.36■□□□□ 0.05
VPS54-201ENST00000272322 LCN6P62502 163 aa15.36■□□□□ 0.05
VPS54-201ENST00000272322 EOGTQ5NDL2 527 aa15.36■□□□□ 0.05
VPS54-201ENST00000272322 NKAIN2Q5VXU1 208 aa15.36■□□□□ 0.05
VPS54-201ENST00000272322 XKRXQ6PP77 449 aa15.36■□□□□ 0.05
VPS54-201ENST00000272322 USP53Q70EK8 1073 aa15.36■□□□□ 0.05
VPS54-201ENST00000272322 MEPCEQ7L2J0 689 aaKnown RBP15.36■□□□□ 0.05
VPS54-201ENST00000272322 SERPINA12Q8IW75 414 aa15.36■□□□□ 0.05
VPS54-201ENST00000272322 ZNRF4Q8WWF5 429 aa15.36■□□□□ 0.05
VPS54-201ENST00000272322 AP3S1Q92572 193 aa15.36■□□□□ 0.05
VPS54-201ENST00000272322 RIT1Q92963 219 aa15.36■□□□□ 0.05
VPS54-201ENST00000272322 ST6GAL2Q96JF0 529 aa15.36■□□□□ 0.05
VPS54-201ENST00000272322 NMNAT3Q96T66 252 aa15.36■□□□□ 0.05
VPS54-201ENST00000272322 AK6Q9Y3D8 172 aaKnown RBP15.36■□□□□ 0.05
VPS54-201ENST00000272322 C2orf74A8MZ97 194 aa15.36■□□□□ 0.05
VPS54-201ENST00000272322 RNF13O43567 381 aa15.36■□□□□ 0.05
VPS54-201ENST00000272322 CD3GP09693 182 aa15.36■□□□□ 0.05
VPS54-201ENST00000272322 ZNF10P21506 573 aaPredicted RBP15.36■□□□□ 0.05
VPS54-201ENST00000272322 CLDN12P56749 244 aa15.36■□□□□ 0.05
VPS54-201ENST00000272322 PRICKLE4Q2TBC4 344 aa15.36■□□□□ 0.05
VPS54-201ENST00000272322 AMZ1Q400G9 498 aa15.36■□□□□ 0.05
VPS54-201ENST00000272322 HEPHL1Q6MZM0 1159 aa15.36■□□□□ 0.05
VPS54-201ENST00000272322 SMPDL3BQ92485 455 aa15.36■□□□□ 0.05
VPS54-201ENST00000272322 ZNF350Q9GZX5 532 aa15.36■□□□□ 0.05
VPS54-201ENST00000272322 GALNT9Q9HCQ5 603 aa15.36■□□□□ 0.05
VPS54-201ENST00000272322 CYR61O00622 381 aa15.35■□□□□ 0.05
VPS54-201ENST00000272322 DBIP07108 87 aaKnown RBP15.35■□□□□ 0.05
VPS54-201ENST00000272322 AKT2P31751 481 aa15.35■□□□□ 0.05
VPS54-201ENST00000272322 DUSP8Q13202 625 aa15.35■□□□□ 0.05
VPS54-201ENST00000272322 FZD5Q13467 585 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms