RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 CSF2RAP15509 400 aa25.45■■□□□ 1.67
CBX4-201ENST00000269397 FAAH2Q6GMR7 532 aa25.45■■□□□ 1.67
CBX4-201ENST00000269397 GPALPP1Q8IXQ4 340 aa25.45■■□□□ 1.67
CBX4-201ENST00000269397 SLAIN1Q8ND83 568 aa25.45■■□□□ 1.67
CBX4-201ENST00000269397 LRRN3Q9H3W5 708 aa25.45■■□□□ 1.67
CBX4-201ENST00000269397 NUP50Q9UKX7 468 aa25.45■■□□□ 1.67
CBX4-201ENST00000269397 DNAJB6O75190 326 aa25.45■■□□□ 1.66
CBX4-201ENST00000269397 PPP1R3DO95685 299 aa25.45■■□□□ 1.66
CBX4-201ENST00000269397 EPXP11678 715 aa25.45■■□□□ 1.66
CBX4-201ENST00000269397 PEBP1P30086 187 aaKnown RBP25.45■■□□□ 1.66
CBX4-201ENST00000269397 EEF1A1P68104 462 aaKnown RBP25.45■■□□□ 1.66
CBX4-201ENST00000269397 PUDPQ08623 228 aa25.45■■□□□ 1.66
CBX4-201ENST00000269397 MRPL2Q5T653 305 aaKnown RBP25.45■■□□□ 1.66
CBX4-201ENST00000269397 TMEM65Q6PI78 240 aa25.45■■□□□ 1.66
CBX4-201ENST00000269397 SLC39A5Q6ZMH5 540 aa25.45■■□□□ 1.66
CBX4-201ENST00000269397 RANBP3LQ86VV4 465 aaPredicted RBP25.45■■□□□ 1.66
CBX4-201ENST00000269397 HGDQ93099 445 aa25.45■■□□□ 1.66
CBX4-201ENST00000269397 GMDSO60547 372 aa25.44■■□□□ 1.66
CBX4-201ENST00000269397 IFNA7P01567 189 aa25.44■■□□□ 1.66
CBX4-201ENST00000269397 SIM1P81133 766 aaPredicted RBP25.44■■□□□ 1.66
CBX4-201ENST00000269397 GRK1Q15835 563 aa25.44■■□□□ 1.66
CBX4-201ENST00000269397 AANATQ16613 207 aa25.44■■□□□ 1.66
CBX4-201ENST00000269397 TMEM255AQ5JRV8 349 aa25.44■■□□□ 1.66
CBX4-201ENST00000269397 DMKNQ6E0U4 476 aaPredicted RBP25.44■■□□□ 1.66
CBX4-201ENST00000269397 NRROSQ86YC3 692 aa25.44■■□□□ 1.66
CBX4-201ENST00000269397 FTMTQ8N4E7 242 aa25.44■■□□□ 1.66
CBX4-201ENST00000269397 GRHL3Q8TE85 626 aa25.44■■□□□ 1.66
CBX4-201ENST00000269397 HMGB4Q8WW32 186 aa25.44■■□□□ 1.66
CBX4-201ENST00000269397 BPIFA2Q96DR5 249 aa25.44■■□□□ 1.66
CBX4-201ENST00000269397 SDF2Q99470 211 aa25.44■■□□□ 1.66
CBX4-201ENST00000269397 C1QTNF6Q9BXI9 259 aa25.44■■□□□ 1.66
CBX4-201ENST00000269397 UBQLN2Q9UHD9 624 aa25.44■■□□□ 1.66
CBX4-201ENST00000269397 CLTBP09497 229 aa25.44■■□□□ 1.66
CBX4-201ENST00000269397 ARHGEF6Q15052 776 aa25.44■■□□□ 1.66
CBX4-201ENST00000269397 RTL4Q6ZR62 310 aa25.44■■□□□ 1.66
CBX4-201ENST00000269397 BTN2A1Q7KYR7 527 aa25.44■■□□□ 1.66
CBX4-201ENST00000269397 ZNF671Q8TAW3 534 aa25.44■■□□□ 1.66
CBX4-201ENST00000269397 MARVELD3Q96A59 401 aa25.44■■□□□ 1.66
CBX4-201ENST00000269397 MS4A4EQ96PG1 132 aa25.44■■□□□ 1.66
CBX4-201ENST00000269397 C20orf85Q9H1P6 137 aa25.44■■□□□ 1.66
CBX4-201ENST00000269397 TEX51A0A1B0GUA7 166 aa25.43■■□□□ 1.66
CBX4-201ENST00000269397 DUXAA6NLW8 204 aa25.43■■□□□ 1.66
CBX4-201ENST00000269397 PAK4O96013 591 aaPredicted RBP25.43■■□□□ 1.66
CBX4-201ENST00000269397 UBL4AP11441 157 aa25.43■■□□□ 1.66
CBX4-201ENST00000269397 GDNFP39905 211 aa25.43■■□□□ 1.66
CBX4-201ENST00000269397 TRMT12Q53H54 448 aaKnown RBP25.43■■□□□ 1.66
CBX4-201ENST00000269397 Q6ZTK2 550 aa25.43■■□□□ 1.66
CBX4-201ENST00000269397 MTSS1LQ765P7 747 aa25.43■■□□□ 1.66
CBX4-201ENST00000269397 CHMP1BQ7LBR1 199 aa25.43■■□□□ 1.66
CBX4-201ENST00000269397 NLRC3Q7RTR2 1065 aa25.43■■□□□ 1.66
CBX4-201ENST00000269397 HAVCR2Q8TDQ0 301 aa25.43■■□□□ 1.66
CBX4-201ENST00000269397 DERL3Q96Q80 235 aa25.43■■□□□ 1.66
CBX4-201ENST00000269397 CXXC1Q9P0U4 656 aaPredicted RBP25.43■■□□□ 1.66
CBX4-201ENST00000269397 KCNE5Q9UJ90 142 aa25.43■■□□□ 1.66
CBX4-201ENST00000269397 ACSL5Q9ULC5 683 aa25.43■■□□□ 1.66
CBX4-201ENST00000269397 INSL6Q9Y581 213 aa25.43■■□□□ 1.66
CBX4-201ENST00000269397 ABHD14A-ACY1A0A1B0GW23 586 aa25.43■■□□□ 1.66
CBX4-201ENST00000269397 G3V3Q6 166 aa25.43■■□□□ 1.66
CBX4-201ENST00000269397 EPCAMP16422 314 aa25.43■■□□□ 1.66
CBX4-201ENST00000269397 ITGB8P26012 769 aa25.43■■□□□ 1.66
CBX4-201ENST00000269397 VASPP50552 380 aaPredicted RBP25.43■■□□□ 1.66
CBX4-201ENST00000269397 KLF9Q13886 244 aaPredicted RBP25.43■■□□□ 1.66
CBX4-201ENST00000269397 KANSL1Q7Z3B3 1105 aa25.43■■□□□ 1.66
CBX4-201ENST00000269397 CDH24Q86UP0 819 aa25.43■■□□□ 1.66
CBX4-201ENST00000269397 OR2L8Q8NGY9 312 aa25.43■■□□□ 1.66
CBX4-201ENST00000269397 LGALS14Q8TCE9 139 aa25.43■■□□□ 1.66
CBX4-201ENST00000269397 ZMYND19Q96E35 227 aaPredicted RBP25.43■■□□□ 1.66
CBX4-201ENST00000269397 ADAP2Q9NPF8 381 aa25.43■■□□□ 1.66
CBX4-201ENST00000269397 PRELID1Q9Y255 219 aa25.43■■□□□ 1.66
CBX4-201ENST00000269397 NRG3P56975 720 aa25.42■■□□□ 1.66
CBX4-201ENST00000269397 HACD4Q5VWC8 232 aa25.42■■□□□ 1.66
CBX4-201ENST00000269397 ASPGQ86U10 573 aa25.42■■□□□ 1.66
CBX4-201ENST00000269397 BPHLQ86WA6 291 aaPredicted RBP25.42■■□□□ 1.66
CBX4-201ENST00000269397 LRRC25Q8N386 305 aaPredicted RBP25.42■■□□□ 1.66
CBX4-201ENST00000269397 OR14A2Q96R54 314 aa25.42■■□□□ 1.66
CBX4-201ENST00000269397 SIGLEC7Q9Y286 467 aa25.42■■□□□ 1.66
CBX4-201ENST00000269397 SLC27A6Q9Y2P4 619 aa25.42■■□□□ 1.66
CBX4-201ENST00000269397 RIIAD1A6NNX1 92 aa25.42■■□□□ 1.66
CBX4-201ENST00000269397 ADH1CP00326 375 aa25.42■■□□□ 1.66
CBX4-201ENST00000269397 ZNF888P0CJ79 500 aaPredicted RBP25.42■■□□□ 1.66
CBX4-201ENST00000269397 PEPDP12955 493 aa25.42■■□□□ 1.66
CBX4-201ENST00000269397 POLR2CP19387 275 aaPredicted RBP25.42■■□□□ 1.66
CBX4-201ENST00000269397 NDUFS1P28331 727 aa25.42■■□□□ 1.66
CBX4-201ENST00000269397 WASP42768 502 aa25.42■■□□□ 1.66
CBX4-201ENST00000269397 ARFIP1P53367 373 aa25.42■■□□□ 1.66
CBX4-201ENST00000269397 OR4C6Q8NH72 309 aa25.42■■□□□ 1.66
CBX4-201ENST00000269397 C10orf90Q96M02 699 aa25.42■■□□□ 1.66
CBX4-201ENST00000269397 ZNF436Q9C0F3 470 aaPredicted RBP25.42■■□□□ 1.66
CBX4-201ENST00000269397 OR10A4Q9H209 315 aa25.42■■□□□ 1.66
CBX4-201ENST00000269397 TMEM74BQ9NUR3 256 aa25.42■■□□□ 1.66
CBX4-201ENST00000269397 WSB2Q9NYS7 404 aaPredicted RBP25.42■■□□□ 1.66
CBX4-201ENST00000269397 COPZ2Q9P299 210 aa25.42■■□□□ 1.66
CBX4-201ENST00000269397 DEC1Q9P2X7 70 aa25.42■■□□□ 1.66
CBX4-201ENST00000269397 ST6GALNAC2Q9UJ37 374 aa25.42■■□□□ 1.66
CBX4-201ENST00000269397 SCP2D1Q9UJQ7 156 aa25.42■■□□□ 1.66
CBX4-201ENST00000269397 RCE1Q9Y256 329 aa25.42■■□□□ 1.66
CBX4-201ENST00000269397 NPFFR2Q9Y5X5 522 aa25.42■■□□□ 1.66
CBX4-201ENST00000269397 CARNS1A5YM72 827 aa25.41■■□□□ 1.66
CBX4-201ENST00000269397 FLRT2O43155 660 aa25.41■■□□□ 1.66
CBX4-201ENST00000269397 PITPNAQ00169 270 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms