RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 HELZ2Q9BYK8 2649 aaKnown RBP12.91□□□□□ -0.34
SSBP1-201ENST00000265304 TCRBV3S1A0A5B6 114 aa12.91□□□□□ -0.34
SSBP1-201ENST00000265304 OR2M5A3KFT3 312 aa12.91□□□□□ -0.34
SSBP1-201ENST00000265304 TTLL8A6PVC2 850 aa12.91□□□□□ -0.34
SSBP1-201ENST00000265304 FAM166BA8MTA8 275 aa12.91□□□□□ -0.34
SSBP1-201ENST00000265304 AP3D1O14617 1153 aa12.91□□□□□ -0.34
SSBP1-201ENST00000265304 CDC40O60508 579 aaKnown RBP eCLIP12.91□□□□□ -0.34
SSBP1-201ENST00000265304 PRKD3O94806 890 aa12.91□□□□□ -0.34
SSBP1-201ENST00000265304 GKN3PP0CG01 181 aa12.91□□□□□ -0.34
SSBP1-201ENST00000265304 UMPSP11172 480 aa12.91□□□□□ -0.34
SSBP1-201ENST00000265304 EDN3P14138 238 aa12.91□□□□□ -0.34
SSBP1-201ENST00000265304 UQCRBP14927 111 aa12.91□□□□□ -0.34
SSBP1-201ENST00000265304 CPN1P15169 458 aa12.91□□□□□ -0.34
SSBP1-201ENST00000265304 HTR2AP28223 471 aa12.91□□□□□ -0.34
SSBP1-201ENST00000265304 APOBEC1P41238 236 aaKnown RBP12.91□□□□□ -0.34
SSBP1-201ENST00000265304 MAGEA2P43356 314 aa12.91□□□□□ -0.34
SSBP1-201ENST00000265304 RNF144AP50876 292 aaPredicted RBP12.91□□□□□ -0.34
SSBP1-201ENST00000265304 RGS8P57771 180 aaPredicted RBP12.91□□□□□ -0.34
SSBP1-201ENST00000265304 IFI44LQ53G44 452 aa12.91□□□□□ -0.34
SSBP1-201ENST00000265304 SWT1Q5T5J6 900 aaKnown RBP12.91□□□□□ -0.34
SSBP1-201ENST00000265304 ZNF613Q6PF04 617 aa12.91□□□□□ -0.34
SSBP1-201ENST00000265304 LINC00114Q6XXX2 140 aa12.91□□□□□ -0.34
SSBP1-201ENST00000265304 GRINAQ7Z429 371 aa12.91□□□□□ -0.34
SSBP1-201ENST00000265304 VTCN1Q7Z7D3 282 aa12.91□□□□□ -0.34
SSBP1-201ENST00000265304 CARM1Q86X55 608 aa12.91□□□□□ -0.34
SSBP1-201ENST00000265304 LACC1Q8IV20 430 aa12.91□□□□□ -0.34
SSBP1-201ENST00000265304 GEMIN6Q8WXD5 167 aaKnown RBP12.91□□□□□ -0.34
SSBP1-201ENST00000265304 DUS3LQ96G46 650 aaKnown RBP12.91□□□□□ -0.34
SSBP1-201ENST00000265304 PIGQQ9BRB3 760 aa12.91□□□□□ -0.34
SSBP1-201ENST00000265304 LUZP4Q9P127 313 aa12.91□□□□□ -0.34
SSBP1-201ENST00000265304 ZNF835Q9Y2P0 537 aa12.91□□□□□ -0.34
SSBP1-201ENST00000265304 SPTBN1Q01082 2364 aaKnown RBP12.91□□□□□ -0.34
SSBP1-201ENST00000265304 ALPK2Q86TB3 2170 aa12.9□□□□□ -0.34
SSBP1-201ENST00000265304 INTS1Q8N201 2190 aaKnown RBP12.9□□□□□ -0.34
SSBP1-201ENST00000265304 TRGV5A0A0B4J1U4 118 aa12.9□□□□□ -0.34
SSBP1-201ENST00000265304 FRS3O43559 492 aa12.9□□□□□ -0.34
SSBP1-201ENST00000265304 FZD7O75084 574 aa12.9□□□□□ -0.34
SSBP1-201ENST00000265304 PRSS23O95084 383 aa12.9□□□□□ -0.34
SSBP1-201ENST00000265304 LYPD3O95274 346 aa12.9□□□□□ -0.34
SSBP1-201ENST00000265304 WISP1O95388 367 aa12.9□□□□□ -0.34
SSBP1-201ENST00000265304 THRBP10828 461 aa12.9□□□□□ -0.34
SSBP1-201ENST00000265304 HK1P19367 917 aa12.9□□□□□ -0.34
SSBP1-201ENST00000265304 IDH2P48735 452 aaKnown RBP12.9□□□□□ -0.34
SSBP1-201ENST00000265304 CLK1P49759 484 aaKnown RBP12.9□□□□□ -0.34
SSBP1-201ENST00000265304 ZNF41P51814 821 aaPredicted RBP12.9□□□□□ -0.34
SSBP1-201ENST00000265304 RAC1P63000 192 aa12.9□□□□□ -0.34
SSBP1-201ENST00000265304 FOXK1P85037 733 aa12.9□□□□□ -0.34
SSBP1-201ENST00000265304 PRR30Q53SZ7 412 aaPredicted RBP12.9□□□□□ -0.34
SSBP1-201ENST00000265304 ARHGAP11AQ6P4F7 1023 aa12.9□□□□□ -0.34
SSBP1-201ENST00000265304 Q6ZPB1 254 aaPredicted RBP12.9□□□□□ -0.34
SSBP1-201ENST00000265304 PLEKHM3Q6ZWE6 761 aa12.9□□□□□ -0.34
SSBP1-201ENST00000265304 FGD2Q7Z6J4 655 aa12.9□□□□□ -0.34
SSBP1-201ENST00000265304 YRDCQ86U90 279 aaKnown RBP12.9□□□□□ -0.34
SSBP1-201ENST00000265304 TSPYL5Q86VY4 417 aaPredicted RBP12.9□□□□□ -0.34
SSBP1-201ENST00000265304 ADGRG3Q86Y34 549 aa12.9□□□□□ -0.34
SSBP1-201ENST00000265304 RBM45Q8IUH3 476 aaKnown RBP12.9□□□□□ -0.34
SSBP1-201ENST00000265304 SPPL2CQ8IUH8 684 aa12.9□□□□□ -0.34
SSBP1-201ENST00000265304 GHDCQ8N2G8 530 aa12.9□□□□□ -0.34
SSBP1-201ENST00000265304 FAM86B1Q8N7N1 296 aa12.9□□□□□ -0.34
SSBP1-201ENST00000265304 PAPD5Q8NDF8 572 aaKnown RBP12.9□□□□□ -0.34
SSBP1-201ENST00000265304 ST6GALNAC3Q8NDV1 305 aa12.9□□□□□ -0.34
SSBP1-201ENST00000265304 CPT1CQ8TCG5 803 aa12.9□□□□□ -0.34
SSBP1-201ENST00000265304 DNAJA4Q8WW22 397 aaPredicted RBP12.9□□□□□ -0.34
SSBP1-201ENST00000265304 SLC38A4Q969I6 547 aa12.9□□□□□ -0.34
SSBP1-201ENST00000265304 C3orf49Q96BT1 292 aa12.9□□□□□ -0.34
SSBP1-201ENST00000265304 HSH2DQ96JZ2 352 aa12.9□□□□□ -0.34
SSBP1-201ENST00000265304 NPAS1Q99742 590 aa12.9□□□□□ -0.34
SSBP1-201ENST00000265304 ZNF426Q9BUY5 554 aa12.9□□□□□ -0.34
SSBP1-201ENST00000265304 DEFB127Q9H1M4 99 aa12.9□□□□□ -0.34
SSBP1-201ENST00000265304 IL1RAPQ9NPH3 570 aa12.9□□□□□ -0.34
SSBP1-201ENST00000265304 SLC13A4Q9UKG4 626 aa12.9□□□□□ -0.34
SSBP1-201ENST00000265304 SH3GLB1Q9Y371 365 aa12.9□□□□□ -0.34
SSBP1-201ENST00000265304 AP4B1Q9Y6B7 739 aa12.9□□□□□ -0.34
SSBP1-201ENST00000265304 A0A0B4J2E0 115 aa12.89□□□□□ -0.35
SSBP1-201ENST00000265304 A0A1B0GX12 115 aa12.89□□□□□ -0.35
SSBP1-201ENST00000265304 NPIPA5E9PKD4 350 aa12.89□□□□□ -0.35
SSBP1-201ENST00000265304 ZNF208O43345 1280 aa12.89□□□□□ -0.35
SSBP1-201ENST00000265304 NPIPB7O75200 414 aa12.89□□□□□ -0.35
SSBP1-201ENST00000265304 GP1BBP13224 206 aa12.89□□□□□ -0.35
SSBP1-201ENST00000265304 CRYZQ08257 329 aaKnown RBP12.89□□□□□ -0.35
SSBP1-201ENST00000265304 FLOT2Q14254 428 aa12.89□□□□□ -0.35
SSBP1-201ENST00000265304 WIPI1Q5MNZ9 446 aaPredicted RBP12.89□□□□□ -0.35
SSBP1-201ENST00000265304 AAGABQ6PD74 315 aa12.89□□□□□ -0.35
SSBP1-201ENST00000265304 ULK3Q6PHR2 472 aa12.89□□□□□ -0.35
SSBP1-201ENST00000265304 ENPP6Q6UWR7 440 aa12.89□□□□□ -0.35
SSBP1-201ENST00000265304 ATG4DQ86TL0 474 aaPredicted RBP12.89□□□□□ -0.35
SSBP1-201ENST00000265304 RANBP3LQ86VV4 465 aaPredicted RBP12.89□□□□□ -0.35
SSBP1-201ENST00000265304 MIB2Q96AX9 1013 aa12.89□□□□□ -0.35
SSBP1-201ENST00000265304 CCDC124Q96CT7 223 aaKnown RBP12.89□□□□□ -0.35
SSBP1-201ENST00000265304 DHRS1Q96LJ7 313 aa12.89□□□□□ -0.35
SSBP1-201ENST00000265304 TRIM15Q9C019 465 aa12.89□□□□□ -0.35
SSBP1-201ENST00000265304 AMBRA1Q9C0C7 1298 aa12.89□□□□□ -0.35
SSBP1-201ENST00000265304 PRDM14Q9GZV8 571 aa12.89□□□□□ -0.35
SSBP1-201ENST00000265304 NDUFAF4Q9P032 175 aa12.89□□□□□ -0.35
SSBP1-201ENST00000265304 SPRR3Q9UBC9 169 aa12.89□□□□□ -0.35
SSBP1-201ENST00000265304 OSGIN1Q9UJX0 560 aa12.89□□□□□ -0.35
SSBP1-201ENST00000265304 DKKL1Q9UK85 242 aa12.89□□□□□ -0.35
SSBP1-201ENST00000265304 A4GNTQ9UNA3 340 aa12.89□□□□□ -0.35
SSBP1-201ENST00000265304 NPIPA1Q9UND3 350 aa12.89□□□□□ -0.35
SSBP1-201ENST00000265304 ZNF337Q9Y3M9 751 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms