RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 GALEQ14376 348 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 TMEM35AQ53FP2 167 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 KANSL1Q7Z3B3 1105 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 TTLQ8NG68 377 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 LGALS14Q8TCE9 139 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 CLDND1Q9NY35 253 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 SLCO1C1Q9NYB5 712 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 PHF11Q9UIL8 331 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.49□□□□□ -0.57
CHMP3-201ENST00000263856 TRAPPC13A5PLN9 417 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 ACOD1A6NK06 481 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 CACNB4O00305 520 aaPredicted RBP11.49□□□□□ -0.57
CHMP3-201ENST00000263856 FLRT2O43155 660 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 OR7A10O76100 309 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 RPP14O95059 124 aaKnown RBP11.49□□□□□ -0.57
CHMP3-201ENST00000263856 HPXP02790 462 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 RAF1P04049 648 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 EDNRAP25101 427 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 AK4P27144 223 aaPredicted RBP11.49□□□□□ -0.57
CHMP3-201ENST00000263856 PRKAR1BP31321 381 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 THBS2P35442 1172 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 VEGFCP49767 419 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 OC90Q02509 493 aaPredicted RBP11.49□□□□□ -0.57
CHMP3-201ENST00000263856 RGS1Q08116 209 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 ZNF765Q7L2R6 523 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 WFIKKN2Q8TEU8 576 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 LCN9Q8WX39 176 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 THAP4Q8WY91 577 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 OTUB2Q96DC9 234 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 ERMAPQ96PL5 475 aaPredicted RBP11.49□□□□□ -0.57
CHMP3-201ENST00000263856 TNFRSF13CQ96RJ3 184 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 TMEM74BQ9NUR3 256 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 CFDP00746 253 aaPredicted RBP11.48□□□□□ -0.57
CHMP3-201ENST00000263856 SBK2P0C263 348 aa11.48□□□□□ -0.57
CHMP3-201ENST00000263856 CMPK1P30085 196 aa11.48□□□□□ -0.57
CHMP3-201ENST00000263856 RPL4P36578 427 aaKnown RBP11.48□□□□□ -0.57
CHMP3-201ENST00000263856 TRA2BP62995 288 aaKnown RBP11.48□□□□□ -0.57
CHMP3-201ENST00000263856 VITQ6UXI7 678 aa11.48□□□□□ -0.57
CHMP3-201ENST00000263856 KIAA0907Q7Z7F0 614 aaPredicted RBP11.48□□□□□ -0.57
CHMP3-201ENST00000263856 MRGPREQ86SM8 312 aa11.48□□□□□ -0.57
CHMP3-201ENST00000263856 TMIEQ8NEW7 156 aa11.48□□□□□ -0.57
CHMP3-201ENST00000263856 YIPF5Q969M3 257 aa11.48□□□□□ -0.57
CHMP3-201ENST00000263856 DDOQ99489 341 aa11.48□□□□□ -0.57
CHMP3-201ENST00000263856 SEC22CQ9BRL7 303 aa11.48□□□□□ -0.57
CHMP3-201ENST00000263856 SLC6A17Q9H1V8 727 aa11.48□□□□□ -0.57
CHMP3-201ENST00000263856 GHITMQ9H3K2 345 aa11.48□□□□□ -0.57
CHMP3-201ENST00000263856 MTHFD2LQ9H903 347 aaPredicted RBP11.48□□□□□ -0.57
CHMP3-201ENST00000263856 B3GNT2Q9NY97 397 aa11.48□□□□□ -0.57
CHMP3-201ENST00000263856 ZMIZ1Q9ULJ6 1067 aa11.48□□□□□ -0.57
CHMP3-201ENST00000263856 PRELID1Q9Y255 219 aa11.48□□□□□ -0.57
CHMP3-201ENST00000263856 MED31Q9Y3C7 131 aa11.48□□□□□ -0.57
CHMP3-201ENST00000263856 NUBP2Q9Y5Y2 271 aa11.48□□□□□ -0.57
CHMP3-201ENST00000263856 TRBV2A0A0J9YWF9 115 aa11.48□□□□□ -0.57
CHMP3-201ENST00000263856 SLC22A31A6NKX4 558 aa11.48□□□□□ -0.57
CHMP3-201ENST00000263856 DUXAA6NLW8 204 aa11.48□□□□□ -0.57
CHMP3-201ENST00000263856 IDSB3KWA1 339 aa11.48□□□□□ -0.57
CHMP3-201ENST00000263856 GPR171O14626 319 aa11.48□□□□□ -0.57
CHMP3-201ENST00000263856 IMPA2O14732 288 aa11.48□□□□□ -0.57
CHMP3-201ENST00000263856 ALDOBP05062 364 aa11.48□□□□□ -0.57
CHMP3-201ENST00000263856 ZNF3P17036 446 aa11.48□□□□□ -0.57
CHMP3-201ENST00000263856 DDX6P26196 483 aaKnown RBP eCLIP11.48□□□□□ -0.57
CHMP3-201ENST00000263856 GDNFP39905 211 aa11.48□□□□□ -0.57
CHMP3-201ENST00000263856 SELENOPP49908 381 aa11.48□□□□□ -0.57
CHMP3-201ENST00000263856 GDI2P50395 445 aaKnown RBP11.48□□□□□ -0.57
CHMP3-201ENST00000263856 BTG1P62324 171 aa11.48□□□□□ -0.57
CHMP3-201ENST00000263856 SGCGQ13326 291 aa11.48□□□□□ -0.57
CHMP3-201ENST00000263856 SLC36A2Q495M3 483 aa11.48□□□□□ -0.57
CHMP3-201ENST00000263856 FAAH2Q6GMR7 532 aa11.48□□□□□ -0.57
CHMP3-201ENST00000263856 LIX1LQ8IVB5 337 aa11.48□□□□□ -0.57
CHMP3-201ENST00000263856 OR14C36Q8NHC7 312 aa11.48□□□□□ -0.57
CHMP3-201ENST00000263856 COX14Q96I36 57 aa11.48□□□□□ -0.57
CHMP3-201ENST00000263856 MS4A4EQ96PG1 132 aa11.48□□□□□ -0.57
CHMP3-201ENST00000263856 DHRS9Q9BPW9 319 aa11.48□□□□□ -0.57
CHMP3-201ENST00000263856 PHPT1Q9NRX4 125 aaPredicted RBP11.48□□□□□ -0.57
CHMP3-201ENST00000263856 MRPL39Q9NYK5 338 aaKnown RBP11.48□□□□□ -0.57
CHMP3-201ENST00000263856 RDH8Q9NYR8 311 aa11.48□□□□□ -0.57
CHMP3-201ENST00000263856 MARK1Q9P0L2 795 aa11.48□□□□□ -0.57
CHMP3-201ENST00000263856 SZT2Q5T011 3432 aa11.48□□□□□ -0.57
CHMP3-201ENST00000263856 CXorf51AA0A1B0GTR3 108 aa11.47□□□□□ -0.57
CHMP3-201ENST00000263856 TRABD2BA6NFA1 517 aa11.47□□□□□ -0.57
CHMP3-201ENST00000263856 ARPC1BO15143 372 aaKnown RBP11.47□□□□□ -0.57
CHMP3-201ENST00000263856 SMAD9O15198 467 aaKnown RBP11.47□□□□□ -0.57
CHMP3-201ENST00000263856 GMDSO60547 372 aa11.47□□□□□ -0.57
CHMP3-201ENST00000263856 ERGP11308 486 aa11.47□□□□□ -0.57
CHMP3-201ENST00000263856 PPM1FP49593 454 aaPredicted RBP11.47□□□□□ -0.57
CHMP3-201ENST00000263856 LGALSLQ3ZCW2 172 aaPredicted RBP11.47□□□□□ -0.57
CHMP3-201ENST00000263856 OR4K14Q8NGD5 310 aa11.47□□□□□ -0.57
CHMP3-201ENST00000263856 ANGPTL6Q8NI99 470 aa11.47□□□□□ -0.57
CHMP3-201ENST00000263856 NXPE2Q96DL1 559 aa11.47□□□□□ -0.57
CHMP3-201ENST00000263856 SCMH1Q96GD3 660 aa11.47□□□□□ -0.57
CHMP3-201ENST00000263856 SDF2Q99470 211 aa11.47□□□□□ -0.57
CHMP3-201ENST00000263856 PRSS16Q9NQE7 514 aa11.47□□□□□ -0.57
CHMP3-201ENST00000263856 MED17Q9NVC6 651 aa11.47□□□□□ -0.57
CHMP3-201ENST00000263856 ZNF69Q9UC07 566 aa11.47□□□□□ -0.57
CHMP3-201ENST00000263856 CA5BQ9Y2D0 317 aa11.47□□□□□ -0.57
CHMP3-201ENST00000263856 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.47□□□□□ -0.57
CHMP3-201ENST00000263856 GRXCR1A8MXD5 290 aa11.47□□□□□ -0.57
CHMP3-201ENST00000263856 ZNF593O00488 134 aaPredicted RBP11.47□□□□□ -0.57
CHMP3-201ENST00000263856 GMFGO60234 142 aa11.47□□□□□ -0.57
CHMP3-201ENST00000263856 PROS1P07225 676 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms