RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 SLC35D2Q76EJ3 337 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 CADM3Q8N126 398 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 C11orf49Q9H6J7 331 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 INIPQ9NRY2 104 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 MRPS17Q9Y2R5 130 aaKnown RBP11.31□□□□□ -0.6
SMG6-201ENST00000263073 ADARB1P78563 741 aaKnown RBP11.3□□□□□ -0.6
SMG6-201ENST00000263073 HTD2P86397 168 aa11.3□□□□□ -0.6
SMG6-201ENST00000263073 AKR1C1Q04828 323 aa11.3□□□□□ -0.6
SMG6-201ENST00000263073 MLLT11Q13015 90 aaPredicted RBP11.3□□□□□ -0.6
SMG6-201ENST00000263073 VEZF1Q14119 521 aa11.3□□□□□ -0.6
SMG6-201ENST00000263073 COX20Q5RI15 118 aa11.3□□□□□ -0.6
SMG6-201ENST00000263073 BPIFB2Q8N4F0 458 aa11.3□□□□□ -0.6
SMG6-201ENST00000263073 OR10K1Q8NGX5 313 aa11.3□□□□□ -0.6
SMG6-201ENST00000263073 LKAAEAR1Q8TD35 194 aa11.3□□□□□ -0.6
SMG6-201ENST00000263073 ARL5BQ96KC2 179 aa11.3□□□□□ -0.6
SMG6-201ENST00000263073 PRRC1Q96M27 445 aa11.3□□□□□ -0.6
SMG6-201ENST00000263073 BABAM2Q9NXR7 383 aa11.3□□□□□ -0.6
SMG6-201ENST00000263073 ATG4BQ9Y4P1 393 aa11.3□□□□□ -0.6
SMG6-201ENST00000263073 A0A0A6YYC8 382 aaPredicted RBP11.3□□□□□ -0.6
SMG6-201ENST00000263073 I3L1I5 382 aaPredicted RBP11.3□□□□□ -0.6
SMG6-201ENST00000263073 SMIM18P0DKX4 95 aa11.3□□□□□ -0.6
SMG6-201ENST00000263073 ACP2P11117 423 aa11.3□□□□□ -0.6
SMG6-201ENST00000263073 LIPAP38571 399 aa11.3□□□□□ -0.6
SMG6-201ENST00000263073 CX3CR1P49238 355 aa11.3□□□□□ -0.6
SMG6-201ENST00000263073 LRRC28Q86X40 367 aaPredicted RBP11.3□□□□□ -0.6
SMG6-201ENST00000263073 LYSMD2Q8IV50 215 aa11.3□□□□□ -0.6
SMG6-201ENST00000263073 ZNF454Q8N9F8 522 aa11.3□□□□□ -0.6
SMG6-201ENST00000263073 OR13F1Q8NGS4 319 aa11.3□□□□□ -0.6
SMG6-201ENST00000263073 TPSD1Q9BZJ3 242 aa11.3□□□□□ -0.6
SMG6-201ENST00000263073 MVB12BQ9H7P6 319 aa11.3□□□□□ -0.6
SMG6-201ENST00000263073 B3GNT2Q9NY97 397 aa11.3□□□□□ -0.6
SMG6-201ENST00000263073 PCDHGA1Q9Y5H4 931 aa11.3□□□□□ -0.6
SMG6-201ENST00000263073 CLDN24A6NM45 220 aa11.3□□□□□ -0.6
SMG6-201ENST00000263073 HEPACAM2A8MVW5 462 aa11.3□□□□□ -0.6
SMG6-201ENST00000263073 RAC2P15153 192 aa11.3□□□□□ -0.6
SMG6-201ENST00000263073 ZNF43P17038 809 aa11.3□□□□□ -0.6
SMG6-201ENST00000263073 ZNF140P52738 457 aaPredicted RBP11.3□□□□□ -0.6
SMG6-201ENST00000263073 RNF4P78317 190 aa11.3□□□□□ -0.6
SMG6-201ENST00000263073 TBCEQ15813 527 aaPredicted RBP11.3□□□□□ -0.6
SMG6-201ENST00000263073 BCL2A1Q16548 175 aa11.3□□□□□ -0.6
SMG6-201ENST00000263073 PDZD11Q5EBL8 140 aa11.3□□□□□ -0.6
SMG6-201ENST00000263073 UBE2NLQ5JXB2 153 aa11.3□□□□□ -0.6
SMG6-201ENST00000263073 ABHD12BQ7Z5M8 362 aaPredicted RBP11.3□□□□□ -0.6
SMG6-201ENST00000263073 MCATQ8IVS2 390 aaKnown RBP11.3□□□□□ -0.6
SMG6-201ENST00000263073 LGALS14Q8TCE9 139 aa11.3□□□□□ -0.6
SMG6-201ENST00000263073 DAZLQ92904 295 aaKnown RBP11.3□□□□□ -0.6
SMG6-201ENST00000263073 DDIT4LQ96D03 193 aa11.3□□□□□ -0.6
SMG6-201ENST00000263073 ZDHHC12Q96GR4 267 aa11.3□□□□□ -0.6
SMG6-201ENST00000263073 ATOH8Q96SQ7 321 aa11.3□□□□□ -0.6
SMG6-201ENST00000263073 SYT17Q9BSW7 474 aa11.3□□□□□ -0.6
SMG6-201ENST00000263073 FANCFQ9NPI8 374 aa11.3□□□□□ -0.6
SMG6-201ENST00000263073 HCFC1R1Q9NWW0 138 aa11.3□□□□□ -0.6
SMG6-201ENST00000263073 IL17CQ9P0M4 197 aa11.3□□□□□ -0.6
SMG6-201ENST00000263073 ZNF443Q9Y2A4 671 aaPredicted RBP11.3□□□□□ -0.6
SMG6-201ENST00000263073 FAM221BA6H8Z2 402 aa11.3□□□□□ -0.6
SMG6-201ENST00000263073 OR7A17O14581 309 aa11.3□□□□□ -0.6
SMG6-201ENST00000263073 ITGB2P05107 769 aa11.3□□□□□ -0.6
SMG6-201ENST00000263073 UBBP0CG47 229 aa11.3□□□□□ -0.6
SMG6-201ENST00000263073 UBCP0CG48 685 aaKnown RBP11.3□□□□□ -0.6
SMG6-201ENST00000263073 OR8G3PP0DMU2 310 aa11.3□□□□□ -0.6
SMG6-201ENST00000263073 MALLQ13021 153 aa11.3□□□□□ -0.6
SMG6-201ENST00000263073 SLC14A1Q13336 389 aa11.3□□□□□ -0.6
SMG6-201ENST00000263073 SLX4IPQ5VYV7 408 aa11.3□□□□□ -0.6
SMG6-201ENST00000263073 ANKRD34AQ69YU3 496 aa11.3□□□□□ -0.6
SMG6-201ENST00000263073 ZNF322Q6U7Q0 402 aaPredicted RBP11.3□□□□□ -0.6
SMG6-201ENST00000263073 METAP1DQ6UB28 335 aaPredicted RBP11.3□□□□□ -0.6
SMG6-201ENST00000263073 NDUFAF7Q7L592 441 aa11.3□□□□□ -0.6
SMG6-201ENST00000263073 ACOT4Q8N9L9 421 aa11.3□□□□□ -0.6
SMG6-201ENST00000263073 SYT3Q9BQG1 590 aa11.3□□□□□ -0.6
SMG6-201ENST00000263073 GON7Q9BXV9 100 aa11.3□□□□□ -0.6
SMG6-201ENST00000263073 GNG13Q9P2W3 67 aa11.3□□□□□ -0.6
SMG6-201ENST00000263073 PHYHO14832 338 aa11.29□□□□□ -0.6
SMG6-201ENST00000263073 SLC16A7O60669 478 aa11.29□□□□□ -0.6
SMG6-201ENST00000263073 SRPX2O60687 465 aaPredicted RBP11.29□□□□□ -0.6
SMG6-201ENST00000263073 PIM1P11309 404 aaPredicted RBP11.29□□□□□ -0.6
SMG6-201ENST00000263073 CCL5P13501 91 aa11.29□□□□□ -0.6
SMG6-201ENST00000263073 PVRP15151 417 aa11.29□□□□□ -0.6
SMG6-201ENST00000263073 ZNF26P17031 533 aaPredicted RBP11.29□□□□□ -0.6
SMG6-201ENST00000263073 GDNFP39905 211 aa11.29□□□□□ -0.6
SMG6-201ENST00000263073 HHEXQ03014 270 aa11.29□□□□□ -0.6
SMG6-201ENST00000263073 OR1Q1Q15612 314 aa11.29□□□□□ -0.6
SMG6-201ENST00000263073 PGGHGQ32M88 737 aa11.29□□□□□ -0.6
SMG6-201ENST00000263073 GDPGP1Q6ZNW5 385 aa11.29□□□□□ -0.6
SMG6-201ENST00000263073 ZNF534Q76KX8 674 aa11.29□□□□□ -0.6
SMG6-201ENST00000263073 ZNF775Q96BV0 537 aaPredicted RBP11.29□□□□□ -0.6
SMG6-201ENST00000263073 MRPL38Q96DV4 380 aaKnown RBP11.29□□□□□ -0.6
SMG6-201ENST00000263073 FYTTD1Q96QD9 318 aaKnown RBP11.29□□□□□ -0.6
SMG6-201ENST00000263073 SEC22CQ9BRL7 303 aa11.29□□□□□ -0.6
SMG6-201ENST00000263073 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.29□□□□□ -0.6
SMG6-201ENST00000263073 FTSJ1Q9UET6 329 aa11.29□□□□□ -0.6
SMG6-201ENST00000263073 APOBEC3BQ9UH17 382 aaKnown RBP11.29□□□□□ -0.6
SMG6-201ENST00000263073 TSTD3H0UI37 97 aa11.29□□□□□ -0.6
SMG6-201ENST00000263073 RBMS1P29558 406 aaKnown RBP11.29□□□□□ -0.6
SMG6-201ENST00000263073 TAS2R20P59543 309 aa11.29□□□□□ -0.6
SMG6-201ENST00000263073 CLDN10P78369 228 aa11.29□□□□□ -0.6
SMG6-201ENST00000263073 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.29□□□□□ -0.69e-30■■■■■ 73.4
SMG6-201ENST00000263073 SPRED1Q7Z699 444 aa11.29□□□□□ -0.6
SMG6-201ENST00000263073 GLB1L2Q8IW92 636 aa11.29□□□□□ -0.6
SMG6-201ENST00000263073 HSD17B8Q92506 261 aa11.29□□□□□ -0.6
SMG6-201ENST00000263073 CRB3Q9BUF7 120 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms