RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 PRPF38BQ5VTL8 546 aaKnown RBP13.9□□□□□ -0.18
XRCC1-201ENST00000262887 TPGS2Q68CL5 300 aa13.9□□□□□ -0.18
XRCC1-201ENST00000262887 APOOLQ6UXV4 268 aa13.9□□□□□ -0.18
XRCC1-201ENST00000262887 NHLRC1Q6VVB1 395 aa13.9□□□□□ -0.18
XRCC1-201ENST00000262887 MBOAT2Q6ZWT7 520 aa13.9□□□□□ -0.18
XRCC1-201ENST00000262887 LSRQ86X29 649 aaPredicted RBP13.9□□□□□ -0.18
XRCC1-201ENST00000262887 AMER3Q8N944 861 aa13.9□□□□□ -0.18
XRCC1-201ENST00000262887 ZDHHC1Q8WTX9 485 aa13.9□□□□□ -0.18
XRCC1-201ENST00000262887 AUTS2Q8WXX7 1259 aa13.9□□□□□ -0.18
XRCC1-201ENST00000262887 MYLIPQ8WY64 445 aa13.9□□□□□ -0.18
XRCC1-201ENST00000262887 GCDHQ92947 438 aaPredicted RBP13.9□□□□□ -0.18
XRCC1-201ENST00000262887 PGLYRP3Q96LB9 341 aa13.9□□□□□ -0.18
XRCC1-201ENST00000262887 AIF1LQ9BQI0 150 aa13.9□□□□□ -0.18
XRCC1-201ENST00000262887 HCAR1Q9BXC0 346 aa13.9□□□□□ -0.18
XRCC1-201ENST00000262887 PLEKHA1Q9HB21 404 aa13.9□□□□□ -0.18
XRCC1-201ENST00000262887 TAS2R5Q9NYW4 299 aa13.9□□□□□ -0.18
XRCC1-201ENST00000262887 NFKBIL1Q9UBC1 381 aaPredicted RBP13.9□□□□□ -0.18
XRCC1-201ENST00000262887 ZMIZ1Q9ULJ6 1067 aa13.9□□□□□ -0.18
XRCC1-201ENST00000262887 PRUNE2Q8WUY3 3088 aa13.9□□□□□ -0.18
XRCC1-201ENST00000262887 TP53BP1Q12888 1972 aaPredicted RBP13.9□□□□□ -0.18
XRCC1-201ENST00000262887 TRAV20A0A0B4J274 112 aa13.9□□□□□ -0.18
XRCC1-201ENST00000262887 GLOD5A6NK44 160 aa13.9□□□□□ -0.18
XRCC1-201ENST00000262887 FAM74A7A6NL05 159 aa13.9□□□□□ -0.18
XRCC1-201ENST00000262887 MPTX1A8MV57 137 aa13.9□□□□□ -0.18
XRCC1-201ENST00000262887 KIAA0355O15063 1070 aa13.9□□□□□ -0.18
XRCC1-201ENST00000262887 ERAL1O75616 437 aaKnown RBP13.9□□□□□ -0.18
XRCC1-201ENST00000262887 NTSP30990 170 aa13.9□□□□□ -0.18
XRCC1-201ENST00000262887 MEOX2P50222 304 aa13.9□□□□□ -0.18
XRCC1-201ENST00000262887 FAM74A3Q4VXF1 159 aa13.9□□□□□ -0.18
XRCC1-201ENST00000262887 UBE2NLQ5JXB2 153 aa13.9□□□□□ -0.18
XRCC1-201ENST00000262887 ZNF626Q68DY1 528 aa13.9□□□□□ -0.18
XRCC1-201ENST00000262887 HTR3DQ70Z44 454 aa13.9□□□□□ -0.18
XRCC1-201ENST00000262887 MCATQ8IVS2 390 aaKnown RBP13.9□□□□□ -0.18
XRCC1-201ENST00000262887 CCDC36Q8IYA8 594 aa13.9□□□□□ -0.18
XRCC1-201ENST00000262887 GHSRQ92847 366 aa13.9□□□□□ -0.18
XRCC1-201ENST00000262887 LRRC46Q96FV0 321 aa13.9□□□□□ -0.18
XRCC1-201ENST00000262887 C16orf58Q96GQ5 468 aa13.9□□□□□ -0.18
XRCC1-201ENST00000262887 INPP5EQ9NRR6 644 aa13.9□□□□□ -0.18
XRCC1-201ENST00000262887 KLHL28Q9NXS3 571 aa13.9□□□□□ -0.18
XRCC1-201ENST00000262887 ASF1AQ9Y294 204 aa13.9□□□□□ -0.18
XRCC1-201ENST00000262887 MTCL1Q9Y4B5 1905 aaKnown RBP13.89□□□□□ -0.19
XRCC1-201ENST00000262887 MYO10Q9HD67 2058 aa13.89□□□□□ -0.19
XRCC1-201ENST00000262887 HMSDA8MTL9 139 aa13.89□□□□□ -0.19
XRCC1-201ENST00000262887 NDUFS4O43181 175 aa13.89□□□□□ -0.19
XRCC1-201ENST00000262887 PRKRAO75569 313 aaKnown RBP13.89□□□□□ -0.19
XRCC1-201ENST00000262887 ATP1B1P05026 303 aa13.89□□□□□ -0.19
XRCC1-201ENST00000262887 ELFN1P0C7U0 828 aa13.89□□□□□ -0.19
XRCC1-201ENST00000262887 TYRP1P17643 537 aa13.89□□□□□ -0.19
XRCC1-201ENST00000262887 NRG3P56975 720 aa13.89□□□□□ -0.19
XRCC1-201ENST00000262887 OR12D2P58182 307 aa13.89□□□□□ -0.19
XRCC1-201ENST00000262887 TAS2R38P59533 333 aa13.89□□□□□ -0.19
XRCC1-201ENST00000262887 DEFA5Q01523 94 aa13.89□□□□□ -0.19
XRCC1-201ENST00000262887 ARSIQ5FYB1 569 aa13.89□□□□□ -0.19
XRCC1-201ENST00000262887 TMPRSS9Q7Z410 1059 aa13.89□□□□□ -0.19
XRCC1-201ENST00000262887 GDF7Q7Z4P5 450 aa13.89□□□□□ -0.19
XRCC1-201ENST00000262887 CMTM4Q8IZR5 234 aa13.89□□□□□ -0.19
XRCC1-201ENST00000262887 OR5M9Q8NGP3 310 aa13.89□□□□□ -0.19
XRCC1-201ENST00000262887 LGALS14Q8TCE9 139 aa13.89□□□□□ -0.19
XRCC1-201ENST00000262887 GANCQ8TET4 914 aa13.89□□□□□ -0.19
XRCC1-201ENST00000262887 HMGB4Q8WW32 186 aa13.89□□□□□ -0.19
XRCC1-201ENST00000262887 SLC41A3Q96GZ6 507 aa13.89□□□□□ -0.19
XRCC1-201ENST00000262887 ZNF764Q96H86 408 aaPredicted RBP13.89□□□□□ -0.19
XRCC1-201ENST00000262887 LMLNQ96KR4 655 aa13.89□□□□□ -0.19
XRCC1-201ENST00000262887 MCHR1Q99705 422 aa13.89□□□□□ -0.19
XRCC1-201ENST00000262887 SLC19A3Q9BZV2 496 aa13.89□□□□□ -0.19
XRCC1-201ENST00000262887 OR2AG1Q9H205 316 aa13.89□□□□□ -0.19
XRCC1-201ENST00000262887 SLC38A1Q9H2H9 487 aa13.89□□□□□ -0.19
XRCC1-201ENST00000262887 OR52D1Q9H346 318 aa13.89□□□□□ -0.19
XRCC1-201ENST00000262887 FN3KQ9H479 309 aa13.89□□□□□ -0.19
XRCC1-201ENST00000262887 KHDRBS3O75525 346 aaKnown RBP13.89□□□□□ -0.19
XRCC1-201ENST00000262887 SIX6O95475 246 aa13.89□□□□□ -0.19
XRCC1-201ENST00000262887 TIMP2P16035 220 aa13.89□□□□□ -0.19
XRCC1-201ENST00000262887 ANXA7P20073 488 aaKnown RBP13.89□□□□□ -0.19
XRCC1-201ENST00000262887 TGM3Q08188 693 aa13.89□□□□□ -0.19
XRCC1-201ENST00000262887 PABPC1L2AQ5JQF8 200 aa13.89□□□□□ -0.19
XRCC1-201ENST00000262887 C17orf99Q6UX52 265 aa13.89□□□□□ -0.19
XRCC1-201ENST00000262887 RNF180Q86T96 592 aa13.89□□□□□ -0.19
XRCC1-201ENST00000262887 OR52L1Q8NGH7 329 aa13.89□□□□□ -0.19
XRCC1-201ENST00000262887 OR52I2Q8NH67 350 aa13.89□□□□□ -0.19
XRCC1-201ENST00000262887 THEM6Q8WUY1 208 aa13.89□□□□□ -0.19
XRCC1-201ENST00000262887 KISS1RQ969F8 398 aaPredicted RBP13.89□□□□□ -0.19
XRCC1-201ENST00000262887 OR51V1Q9H2C8 321 aa13.89□□□□□ -0.19
XRCC1-201ENST00000262887 SLC6A20Q9NP91 592 aa13.89□□□□□ -0.19
XRCC1-201ENST00000262887 EQTNQ9NQ60 294 aa13.89□□□□□ -0.19
XRCC1-201ENST00000262887 FBXL3Q9UKT7 428 aa13.89□□□□□ -0.19
XRCC1-201ENST00000262887 HPP00738 406 aa13.88□□□□□ -0.19
XRCC1-201ENST00000262887 THY1P04216 161 aa13.88□□□□□ -0.19
XRCC1-201ENST00000262887 ZGLP1P0C6A0 271 aa13.88□□□□□ -0.19
XRCC1-201ENST00000262887 PRG2P13727 222 aa13.88□□□□□ -0.19
XRCC1-201ENST00000262887 PYCR1P32322 319 aa13.88□□□□□ -0.19
XRCC1-201ENST00000262887 UBXN2BQ14CS0 331 aa13.88□□□□□ -0.19
XRCC1-201ENST00000262887 PDSS1Q5T2R2 415 aa13.88□□□□□ -0.19
XRCC1-201ENST00000262887 ZC3H14Q6PJT7 736 aaKnown RBP13.88□□□□□ -0.19
XRCC1-201ENST00000262887 PAQR7Q86WK9 346 aa13.88□□□□□ -0.19
XRCC1-201ENST00000262887 NPAS4Q8IUM7 802 aa13.88□□□□□ -0.19
XRCC1-201ENST00000262887 OR4D10Q8NGI6 311 aa13.88□□□□□ -0.19
XRCC1-201ENST00000262887 SPG21Q9NZD8 308 aa13.88□□□□□ -0.19
XRCC1-201ENST00000262887 ABT1Q9ULW3 272 aaKnown RBP13.88□□□□□ -0.19
XRCC1-201ENST00000262887 FXYD6-FXYD2A0A087WZ82 144 aa13.88□□□□□ -0.19
XRCC1-201ENST00000262887 SNRPGP15A8MWD9 76 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms