RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 OR52D1Q9H346 318 aa12.96□□□□□ -0.34
CDH1-201ENST00000261769 CNOT11Q9UKZ1 510 aaKnown RBP12.96□□□□□ -0.34
CDH1-201ENST00000261769 A0A1W2PPW3 197 aa12.95□□□□□ -0.34
CDH1-201ENST00000261769 PVALBP20472 110 aaPredicted RBP12.95□□□□□ -0.34
CDH1-201ENST00000261769 RPS5P46782 204 aaKnown RBP12.95□□□□□ -0.34
CDH1-201ENST00000261769 NXPH1P58417 271 aa12.95□□□□□ -0.34
CDH1-201ENST00000261769 PDE7AQ13946 482 aa12.95□□□□□ -0.34
CDH1-201ENST00000261769 DHRS13Q6UX07 377 aa12.95□□□□□ -0.34
CDH1-201ENST00000261769 LANCL3Q6ZV70 420 aa12.95□□□□□ -0.34
CDH1-201ENST00000261769 LAS2Q8IYD9 372 aa12.95□□□□□ -0.34
CDH1-201ENST00000261769 TP53I13Q8NBR0 393 aaPredicted RBP12.95□□□□□ -0.34
CDH1-201ENST00000261769 DEFB124Q8NES8 71 aa12.95□□□□□ -0.34
CDH1-201ENST00000261769 SLC38A5Q8WUX1 472 aa12.95□□□□□ -0.34
CDH1-201ENST00000261769 ASIC5Q9NY37 505 aa12.95□□□□□ -0.34
CDH1-201ENST00000261769 MGAT4AQ9UM21 535 aa12.95□□□□□ -0.34
CDH1-201ENST00000261769 C12orf71A8MTZ7 269 aa12.95□□□□□ -0.34
CDH1-201ENST00000261769 MSL3P1P0C860 447 aa12.95□□□□□ -0.34
CDH1-201ENST00000261769 FCGR2AP12318 317 aa12.95□□□□□ -0.34
CDH1-201ENST00000261769 PRKCDQ05655 676 aa12.95□□□□□ -0.34
CDH1-201ENST00000261769 FAM217AQ8IXS0 508 aa12.95□□□□□ -0.34
CDH1-201ENST00000261769 SIRT6Q8N6T7 355 aa12.95□□□□□ -0.34
CDH1-201ENST00000261769 FRMD1Q8N878 549 aa12.95□□□□□ -0.34
CDH1-201ENST00000261769 CXorf36Q9H7Y0 433 aa12.95□□□□□ -0.34
CDH1-201ENST00000261769 NUFIP1Q9UHK0 495 aaKnown RBP12.95□□□□□ -0.34
CDH1-201ENST00000261769 PCDHB10Q9UN67 800 aa12.95□□□□□ -0.34
CDH1-201ENST00000261769 GPR52Q9Y2T5 361 aa12.95□□□□□ -0.34
CDH1-201ENST00000261769 YARS2Q9Y2Z4 477 aaKnown RBP12.95□□□□□ -0.34
CDH1-201ENST00000261769 TMED7-TICAM2A0A0A6YYA0 188 aa12.95□□□□□ -0.34
CDH1-201ENST00000261769 C5orf51A6NDU8 294 aa12.95□□□□□ -0.34
CDH1-201ENST00000261769 F10P00742 488 aa12.95□□□□□ -0.34
CDH1-201ENST00000261769 LCKP06239 509 aa12.95□□□□□ -0.34
CDH1-201ENST00000261769 EIF5AP63241 154 aaKnown RBP12.95□□□□□ -0.34
CDH1-201ENST00000261769 GABREP78334 506 aa12.95□□□□□ -0.34
CDH1-201ENST00000261769 SLC35F2Q8IXU6 374 aa12.95□□□□□ -0.34
CDH1-201ENST00000261769 OR5AK2Q8NH90 309 aa12.95□□□□□ -0.34
CDH1-201ENST00000261769 SARAFQ96BY9 339 aa12.95□□□□□ -0.34
CDH1-201ENST00000261769 TMED7Q9Y3B3 224 aa12.95□□□□□ -0.34
CDH1-201ENST00000261769 TRAV36DV7A0A075B6V5 113 aa12.95□□□□□ -0.34
CDH1-201ENST00000261769 EEF1E1-BLOC1S5C9J1V9 151 aa12.95□□□□□ -0.34
CDH1-201ENST00000261769 EEF1E1O43324 174 aaKnown RBP12.95□□□□□ -0.34
CDH1-201ENST00000261769 TNFSF14O43557 240 aa12.95□□□□□ -0.34
CDH1-201ENST00000261769 CLPXO76031 633 aa12.95□□□□□ -0.34
CDH1-201ENST00000261769 STSP08842 583 aa12.95□□□□□ -0.34
CDH1-201ENST00000261769 PRKAR1BP31321 381 aa12.95□□□□□ -0.34
CDH1-201ENST00000261769 DEFB109BQ30KR1 87 aa12.95□□□□□ -0.34
CDH1-201ENST00000261769 SLC16A14Q7RTX9 510 aa12.95□□□□□ -0.34
CDH1-201ENST00000261769 ABHD11Q8NFV4 315 aa12.95□□□□□ -0.34
CDH1-201ENST00000261769 SGCZQ96LD1 299 aa12.95□□□□□ -0.34
CDH1-201ENST00000261769 BARD1Q99728 777 aaKnown RBP12.95□□□□□ -0.34
CDH1-201ENST00000261769 SATB2Q9UPW6 733 aa12.95□□□□□ -0.34
CDH1-201ENST00000261769 SHANK3Q9BYB0 1731 aa12.94□□□□□ -0.34
CDH1-201ENST00000261769 PIGBOS1A0A0B4J2F0 54 aa12.94□□□□□ -0.34
CDH1-201ENST00000261769 ANXA3P12429 323 aa12.94□□□□□ -0.34
CDH1-201ENST00000261769 CD22P20273 847 aa12.94□□□□□ -0.34
CDH1-201ENST00000261769 FASLGP48023 281 aa12.94□□□□□ -0.34
CDH1-201ENST00000261769 DNASE1L3Q13609 305 aa12.94□□□□□ -0.34
CDH1-201ENST00000261769 IL11RAQ14626 422 aa12.94□□□□□ -0.34
CDH1-201ENST00000261769 CHRFAM7AQ494W8 412 aa12.94□□□□□ -0.34
CDH1-201ENST00000261769 IQCF1Q8N6M8 205 aa12.94□□□□□ -0.34
CDH1-201ENST00000261769 ZFP90Q8TF47 636 aa12.94□□□□□ -0.34
CDH1-201ENST00000261769 ZNF566Q969W8 418 aa12.94□□□□□ -0.34
CDH1-201ENST00000261769 ZMYND19Q96E35 227 aaPredicted RBP12.94□□□□□ -0.34
CDH1-201ENST00000261769 SLC6A20Q9NP91 592 aa12.94□□□□□ -0.34
CDH1-201ENST00000261769 ACOT13Q9NPJ3 140 aa12.94□□□□□ -0.34
CDH1-201ENST00000261769 DNAJB11Q9UBS4 358 aa12.94□□□□□ -0.34
CDH1-201ENST00000261769 IGHV3-20A0A0C4DH32 117 aa12.94□□□□□ -0.34
CDH1-201ENST00000261769 SLC35F4A4IF30 521 aa12.94□□□□□ -0.34
CDH1-201ENST00000261769 ZNF16P17020 682 aaPredicted RBP12.94□□□□□ -0.34
CDH1-201ENST00000261769 MAGEA12P43365 314 aa12.94□□□□□ -0.34
CDH1-201ENST00000261769 TRIP6Q15654 476 aaKnown RBP12.94□□□□□ -0.34
CDH1-201ENST00000261769 ZNF404Q494X3 552 aa12.94□□□□□ -0.34
CDH1-201ENST00000261769 VWA2Q5GFL6 755 aa12.94□□□□□ -0.34
CDH1-201ENST00000261769 C3orf33Q6P1S2 294 aa12.94□□□□□ -0.34
CDH1-201ENST00000261769 PODNL1Q6PEZ8 512 aa12.94□□□□□ -0.34
CDH1-201ENST00000261769 DNAAF1Q8NEP3 725 aa12.94□□□□□ -0.34
CDH1-201ENST00000261769 TUBA1CQ9BQE3 449 aa12.94□□□□□ -0.34
CDH1-201ENST00000261769 FAM117AQ9C073 453 aa12.94□□□□□ -0.34
CDH1-201ENST00000261769 DDX31Q9H8H2 851 aaKnown RBP12.94□□□□□ -0.34
CDH1-201ENST00000261769 MEPEQ9NQ76 525 aaPredicted RBP12.94□□□□□ -0.34
CDH1-201ENST00000261769 SERGEFQ9UGK8 458 aa12.94□□□□□ -0.34
CDH1-201ENST00000261769 C19orf53Q9UNZ5 99 aaPredicted RBP12.94□□□□□ -0.34
CDH1-201ENST00000261769 TMEM184BQ9Y519 407 aaPredicted RBP12.94□□□□□ -0.34
CDH1-201ENST00000261769 DPPA5A6NC42 116 aa12.94□□□□□ -0.34
CDH1-201ENST00000261769 KLK10O43240 276 aa12.94□□□□□ -0.34
CDH1-201ENST00000261769 SLC19A2O60779 497 aa12.94□□□□□ -0.34
CDH1-201ENST00000261769 RBM34P42696 430 aaKnown RBP12.94□□□□□ -0.34
CDH1-201ENST00000261769 MAP4K2Q12851 820 aa12.94□□□□□ -0.34
CDH1-201ENST00000261769 FZD2Q14332 565 aa12.94□□□□□ -0.34
CDH1-201ENST00000261769 TMEM244Q5VVB8 128 aa12.94□□□□□ -0.34
CDH1-201ENST00000261769 HBMQ6B0K9 141 aa12.94□□□□□ -0.34
CDH1-201ENST00000261769 TMEM207Q6UWW9 146 aa12.94□□□□□ -0.34
CDH1-201ENST00000261769 BHLHA9Q7RTU4 235 aa12.94□□□□□ -0.34
CDH1-201ENST00000261769 TMEM150AQ86TG1 271 aa12.94□□□□□ -0.34
CDH1-201ENST00000261769 CARFQ8N187 725 aa12.94□□□□□ -0.34
CDH1-201ENST00000261769 SDR9C7Q8NEX9 313 aa12.94□□□□□ -0.34
CDH1-201ENST00000261769 FAM46BQ96A09 425 aa12.94□□□□□ -0.34
CDH1-201ENST00000261769 SLC22A4Q9H015 551 aa12.94□□□□□ -0.34
CDH1-201ENST00000261769 CASP8AP2Q9UKL3 1982 aa12.94□□□□□ -0.34
CDH1-201ENST00000261769 LRRTM2O43300 516 aa12.94□□□□□ -0.34
CDH1-201ENST00000261769 RAD1O60671 282 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms