RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 APOA1P02647 267 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 CLTAP09496 248 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 OR8G3PP0DMU2 310 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 PRPS2P11908 318 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 CTRB1P17538 263 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 MSR1P21757 451 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 CALML3P27482 149 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 SAA4P35542 130 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 ACADVLP49748 655 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 SERPINB8P50452 374 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 PPT1P50897 306 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 CRYBB1P53674 252 aaPredicted RBP3.44□□□□□ -1.86
CCDC54-201ENST00000261058 LIPEQ05469 1076 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 NME3Q13232 169 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 DMC1Q14565 340 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 HIGD2BQ4VC39 106 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 TCHHL1Q5QJ38 904 aaPredicted RBP3.44□□□□□ -1.86
CCDC54-201ENST00000261058 ZNF658Q5TYW1 1059 aaPredicted RBP3.44□□□□□ -1.86
CCDC54-201ENST00000261058 LRRC66Q68CR7 880 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 CTRB2Q6GPI1 263 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 DEGS2Q6QHC5 323 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 KDM7AQ6ZMT4 941 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 TMEM26Q6ZUK4 368 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 TRPM8Q7Z2W7 1104 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 CDC20BQ86Y33 519 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 ECHDC2Q86YB7 292 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 MARCH9Q86YJ5 346 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 ABCA7Q8IZY2 2146 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 SYCE1Q8N0S2 351 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 GCNT2Q8N0V5 402 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 SUMF1Q8NBK3 374 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 SPATA4Q8NEY3 305 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 BPIFCQ8NFQ6 507 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 PHYHIPQ92561 330 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 DLX4Q92988 240 aaPredicted RBP3.44□□□□□ -1.86
CCDC54-201ENST00000261058 TMA16Q96EY4 203 aaKnown RBP3.44□□□□□ -1.86
CCDC54-201ENST00000261058 CHMP6Q96FZ7 201 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 FAM173AQ9BQD7 235 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 PARD6BQ9BYG5 372 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 DRC3Q9H069 523 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 DNTTIP1Q9H147 329 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 ZBP1Q9H171 429 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 NTN4Q9HB63 628 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 ABCC13Q9NSE7 274 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 IL37Q9NZH6 218 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 BZW2Q9Y6E2 419 aaKnown RBP3.44□□□□□ -1.86
CCDC54-201ENST00000261058 SH3TC1Q8TE82 1336 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 NOTCH3Q9UM47 2321 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 A0A087WWV3 80 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 LOC105371267A0A1B0GV96 52 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 ERICH2A1L162 156 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 GOLGA8IPA6NC78 632 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 ANKRD30BLA7E2S9 258 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 ZNF701M0R085 212 aaPredicted RBP3.43□□□□□ -1.86
CCDC54-201ENST00000261058 BIRC5O15392 142 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 PHF1O43189 567 aaPredicted RBP3.43□□□□□ -1.86
CCDC54-201ENST00000261058 ZNF208O43345 1280 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 LCMT2O60294 686 aaKnown RBP3.43□□□□□ -1.86
CCDC54-201ENST00000261058 FCMRO60667 390 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 SMIM24O75264 130 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 KBTBD11O94819 623 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 NDUFA7O95182 113 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 HPP00738 406 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 APOEP02649 317 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 PROS1P07225 676 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 SNRPCP09234 159 aaKnown RBP3.43□□□□□ -1.86
CCDC54-201ENST00000261058 PABPC4LP0CB38 370 aaKnown RBP3.43□□□□□ -1.86
CCDC54-201ENST00000261058 CCDC166P0CW27 439 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 CALM1P0DP23 149 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 CALM2P0DP24 149 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 CALM3P0DP25 149 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 RRASP10301 218 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 ZNF44P15621 663 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 PRDX6P30041 224 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 PPP2R1BP30154 601 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 NMT1P30419 496 aaKnown RBP3.43□□□□□ -1.86
CCDC54-201ENST00000261058 PPP1R2P41236 205 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 GRIA1P42261 906 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 POU3F4P49335 361 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 CSRP3P50461 194 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 RAB14P61106 215 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 YWHAGP61981 247 aaKnown RBP eCLIP3.43□□□□□ -1.86
CCDC54-201ENST00000261058 MYBPC1Q00872 1141 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 ITGB3BPQ13352 177 aaPredicted RBP3.43□□□□□ -1.86
CCDC54-201ENST00000261058 CARTPTQ16568 116 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 NDUFA5Q16718 116 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 C15orf32Q32M92 178 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 C14orf28Q4W4Y0 310 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 LDLRAP1Q5SW96 308 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 PRAMEF5Q5TYX0 476 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 PRAMEF6Q5VXH4 476 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 FAM219BQ5XKK7 198 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 PPP1R2P3Q6NXS1 205 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 ADAMTSL5Q6ZMM2 481 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 GOLGA7Q7Z5G4 137 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 SLC51BQ86UW2 128 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 TPRA1Q86W33 373 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 PYROXD2Q8N2H3 581 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 OR4C5Q8NGB2 326 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 OR6T1Q8NGN1 323 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms