RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 RAB4AP20338 218 aa9.15□□□□□ -0.94
CTDSPL2-201ENST00000260327 H3F3CQ6NXT2 135 aa9.15□□□□□ -0.94
CTDSPL2-201ENST00000260327 CCDC71Q8IV32 467 aaPredicted RBP9.15□□□□□ -0.94
CTDSPL2-201ENST00000260327 LRRC25Q8N386 305 aaPredicted RBP9.15□□□□□ -0.94
CTDSPL2-201ENST00000260327 BPIFB2Q8N4F0 458 aa9.15□□□□□ -0.94
CTDSPL2-201ENST00000260327 SCARB1Q8WTV0 552 aa9.15□□□□□ -0.94
CTDSPL2-201ENST00000260327 IGSF21Q96ID5 467 aa9.15□□□□□ -0.94
CTDSPL2-201ENST00000260327 PITHD1Q9GZP4 211 aaPredicted RBP9.15□□□□□ -0.94
CTDSPL2-201ENST00000260327 ARNT2Q9HBZ2 717 aa9.15□□□□□ -0.94
CTDSPL2-201ENST00000260327 ADAMTS5Q9UNA0 930 aa9.15□□□□□ -0.94
CTDSPL2-201ENST00000260327 RHBDD3Q9Y3P4 386 aa9.15□□□□□ -0.94
CTDSPL2-201ENST00000260327 GAPDHSO14556 408 aaPredicted RBP9.15□□□□□ -0.95
CTDSPL2-201ENST00000260327 KIAA0355O15063 1070 aa9.15□□□□□ -0.95
CTDSPL2-201ENST00000260327 CCR7P32248 378 aa9.15□□□□□ -0.95
CTDSPL2-201ENST00000260327 KIAA0319Q5VV43 1072 aa9.15□□□□□ -0.95
CTDSPL2-201ENST00000260327 OR10K2Q6IF99 312 aa9.15□□□□□ -0.95
CTDSPL2-201ENST00000260327 TMEM88Q6PEY1 159 aa9.15□□□□□ -0.95
CTDSPL2-201ENST00000260327 Q6ZSR9 355 aa9.15□□□□□ -0.95
CTDSPL2-201ENST00000260327 PRSS45Q7RTY3 260 aa9.15□□□□□ -0.95
CTDSPL2-201ENST00000260327 SGPP2Q8IWX5 399 aa9.15□□□□□ -0.95
CTDSPL2-201ENST00000260327 LGALS14Q8TCE9 139 aa9.15□□□□□ -0.95
CTDSPL2-201ENST00000260327 FOXN4Q96NZ1 517 aa9.15□□□□□ -0.95
CTDSPL2-201ENST00000260327 SLC6A16Q9GZN6 736 aa9.15□□□□□ -0.95
CTDSPL2-201ENST00000260327 UFSP2Q9NUQ7 469 aa9.15□□□□□ -0.95
CTDSPL2-201ENST00000260327 GABRQQ9UN88 632 aa9.15□□□□□ -0.95
CTDSPL2-201ENST00000260327 SNX11Q9Y5W9 270 aa9.15□□□□□ -0.95
CTDSPL2-201ENST00000260327 C1orf226A1L170 272 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 CA12O43570 354 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 SERPINA7P05543 415 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 SYPP08247 313 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 GDI1P31150 447 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 PSPHP78330 225 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 AAK1Q2M2I8 961 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 FAM83HQ6ZRV2 1179 aaPredicted RBP9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 C7orf61Q8IZ16 206 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 OR4M1Q8NGD0 313 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 OCSTAMPQ9BR26 566 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 BRF2Q9HAW0 419 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 SPHK2Q9NRA0 654 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 MSRAQ9UJ68 235 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 ARID1BQ8NFD5 2236 aaPredicted RBP9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 SLC9B1P1A6NJY1 282 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 RNASET2O00584 256 aaKnown RBP9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 DVL2O14641 736 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 P2RX3P56373 397 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 SIM1P81133 766 aaPredicted RBP9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 PUS10Q3MIT2 529 aaKnown RBP9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 SLC18B1Q6NT16 456 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 ADAMTS14Q8WXS8 1223 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 NIPSNAP1Q9BPW8 284 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 MACROD1Q9BQ69 325 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 BTBD2Q9BX70 525 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 TAS2R31P59538 309 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 MARCH8Q5T0T0 291 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 IL17RCQ8NAC3 791 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 MARC2Q969Z3 335 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 ATP13A2Q9NQ11 1180 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 MRPL22Q9NWU5 206 aaKnown RBP9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 SLC45A1Q9Y2W3 748 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 PHLPP1O60346 1717 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 ACOD1A6NK06 481 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 HSBP1L1C9JCN9 74 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 ADRB1P08588 477 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 RNF4P78317 190 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 MANEALQ5VSG8 457 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 OR6V1Q8N148 313 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 KHSRPQ92945 711 aaKnown RBP eCLIP9.14□□□□□ -0.954e-7■■■■□ 20.7
CTDSPL2-201ENST00000260327 NINJ1Q92982 152 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 DVL3Q92997 716 aaPredicted RBP9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 TMEM231Q9H6L2 316 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 TMEM82A0PJX8 343 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 OTOL1A6NHN0 477 aaPredicted RBP9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 M0QZQ0 153 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 SRPX2O60687 465 aaPredicted RBP9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 CNMDO75829 334 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 STK17BO94768 372 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 DIRAS3O95661 229 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 ANXA7P20073 488 aaKnown RBP9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 CLDN6P56747 220 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 HBA1P69905 142 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 MRPS10P82664 201 aaKnown RBP9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 GPR50Q13585 617 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 RBMS2Q15434 407 aaKnown RBP9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 SFXN4Q6P4A7 337 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 KLHDC8AQ8IYD2 350 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 NRSN1Q8IZ57 195 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 SDSLQ96GA7 329 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 C10orf90Q96M02 699 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 ZIC5Q96T25 663 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 PRRT1Q99946 306 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 PARP12Q9H0J9 701 aaKnown RBP9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 INIPQ9NRY2 104 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 PCDHGA2Q9Y5H1 932 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 A0A1W2PQ45 241 aaPredicted RBP9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 A0A1W2PQY0 241 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 MROH6A6NGR9 719 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 ONECUT3O60422 494 aaPredicted RBP9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 FGF18O76093 207 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 TAS2R20P59543 309 aa9.14□□□□□ -0.95
CTDSPL2-201ENST00000260327 SSTP61278 116 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms