RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 UBQLN3Q9H347 655 aa25.4■■□□□ 1.66
CCM2-201ENST00000258781 APMAPQ9HDC9 416 aa25.4■■□□□ 1.66
CCM2-201ENST00000258781 DIMT1Q9UNQ2 313 aaKnown RBP25.4■■□□□ 1.66
CCM2-201ENST00000258781 HEATR5AQ86XA9 2040 aa25.39■■□□□ 1.66
CCM2-201ENST00000258781 GRK5P34947 590 aa25.39■■□□□ 1.66
CCM2-201ENST00000258781 GPR143P51810 404 aa25.39■■□□□ 1.66
CCM2-201ENST00000258781 NDUFAF6Q330K2 333 aa25.39■■□□□ 1.66
CCM2-201ENST00000258781 LANCL3Q6ZV70 420 aa25.39■■□□□ 1.66
CCM2-201ENST00000258781 PPP1R3BQ86XI6 285 aa25.39■■□□□ 1.66
CCM2-201ENST00000258781 RACGAP1Q9H0H5 632 aa25.39■■□□□ 1.66
CCM2-201ENST00000258781 EFCAB9A8MZ26 197 aa25.38■■□□□ 1.65
CCM2-201ENST00000258781 UBL4AP11441 157 aa25.38■■□□□ 1.65
CCM2-201ENST00000258781 FXYD6P3P58550 94 aa25.38■■□□□ 1.65
CCM2-201ENST00000258781 COPZ1P61923 177 aa25.38■■□□□ 1.65
CCM2-201ENST00000258781 PSPHP78330 225 aa25.38■■□□□ 1.65
CCM2-201ENST00000258781 ZNF385CQ66K41 422 aaPredicted RBP25.38■■□□□ 1.65
CCM2-201ENST00000258781 C17orf47Q8NEP4 570 aa25.38■■□□□ 1.65
CCM2-201ENST00000258781 CCNL2Q96S94 520 aaPredicted RBP25.38■■□□□ 1.65
CCM2-201ENST00000258781 ERGIC3Q9Y282 383 aa25.38■■□□□ 1.65
CCM2-201ENST00000258781 GPR52Q9Y2T5 361 aa25.38■■□□□ 1.65
CCM2-201ENST00000258781 BMP7P18075 431 aa25.38■■□□□ 1.65
CCM2-201ENST00000258781 TRA2AQ13595 282 aaKnown RBP eCLIP25.38■■□□□ 1.65
CCM2-201ENST00000258781 ARMCX4Q5H9R4 360 aa25.38■■□□□ 1.65
CCM2-201ENST00000258781 HSDL2Q6YN16 418 aa25.38■■□□□ 1.65
CCM2-201ENST00000258781 ZNF441Q8N8Z8 693 aa25.38■■□□□ 1.65
CCM2-201ENST00000258781 RFKQ969G6 155 aa25.38■■□□□ 1.65
CCM2-201ENST00000258781 HSPBAP1Q96EW2 488 aa25.38■■□□□ 1.65
CCM2-201ENST00000258781 SIGLEC7Q9Y286 467 aa25.38■■□□□ 1.65
CCM2-201ENST00000258781 HCN1O60741 890 aa25.37■■□□□ 1.65
CCM2-201ENST00000258781 RFPL3O75679 317 aa25.37■■□□□ 1.65
CCM2-201ENST00000258781 RAB36O95755 333 aa25.37■■□□□ 1.65
CCM2-201ENST00000258781 SAGP10523 405 aaPredicted RBP25.37■■□□□ 1.65
CCM2-201ENST00000258781 CLDN6P56747 220 aa25.37■■□□□ 1.65
CCM2-201ENST00000258781 RAB40BQ12829 278 aa25.37■■□□□ 1.65
CCM2-201ENST00000258781 SKP2Q13309 424 aa25.37■■□□□ 1.65
CCM2-201ENST00000258781 SMARCD3Q6STE5 483 aa25.37■■□□□ 1.65
CCM2-201ENST00000258781 OVCH1Q7RTY7 1134 aa25.37■■□□□ 1.65
CCM2-201ENST00000258781 SLC34A3Q8N130 599 aa25.37■■□□□ 1.65
CCM2-201ENST00000258781 SLC43A2Q8N370 569 aa25.37■■□□□ 1.65
CCM2-201ENST00000258781 OR52I1Q8NGK6 324 aa25.37■■□□□ 1.65
CCM2-201ENST00000258781 OR13C2Q8NGS9 318 aa25.37■■□□□ 1.65
CCM2-201ENST00000258781 FGF20Q9NP95 211 aaPredicted RBP25.37■■□□□ 1.65
CCM2-201ENST00000258781 TOR4AQ9NXH8 423 aa25.37■■□□□ 1.65
CCM2-201ENST00000258781 LSM2Q9Y333 95 aaKnown RBP25.37■■□□□ 1.65
CCM2-201ENST00000258781 CH25HO95992 272 aa25.36■■□□□ 1.65
CCM2-201ENST00000258781 HEXBP07686 556 aa25.36■■□□□ 1.65
CCM2-201ENST00000258781 CDK4P11802 303 aa25.36■■□□□ 1.65
CCM2-201ENST00000258781 FGF5P12034 268 aa25.36■■□□□ 1.65
CCM2-201ENST00000258781 IL12BP29460 328 aa25.36■■□□□ 1.65
CCM2-201ENST00000258781 MLLT10P55197 1068 aa25.36■■□□□ 1.65
CCM2-201ENST00000258781 CD226Q15762 336 aa25.36■■□□□ 1.65
CCM2-201ENST00000258781 AADACL4Q5VUY2 407 aa25.36■■□□□ 1.65
CCM2-201ENST00000258781 SHISA6Q6ZSJ9 500 aa25.36■■□□□ 1.65
CCM2-201ENST00000258781 LNX2Q8N448 690 aa25.36■■□□□ 1.65
CCM2-201ENST00000258781 BMPERQ8N8U9 685 aa25.36■■□□□ 1.65
CCM2-201ENST00000258781 OR5M11Q96RB7 305 aa25.36■■□□□ 1.65
CCM2-201ENST00000258781 MND1Q9BWT6 205 aa25.36■■□□□ 1.65
CCM2-201ENST00000258781 A0A087WUJ7 227 aa25.36■■□□□ 1.65
CCM2-201ENST00000258781 BHLHE40O14503 412 aa25.36■■□□□ 1.65
CCM2-201ENST00000258781 TSPAN2O60636 221 aa25.36■■□□□ 1.65
CCM2-201ENST00000258781 PTP4A3O75365 173 aa25.36■■□□□ 1.65
CCM2-201ENST00000258781 REM1O75628 298 aa25.36■■□□□ 1.65
CCM2-201ENST00000258781 NGFRP08138 427 aa25.36■■□□□ 1.65
CCM2-201ENST00000258781 FUT1P19526 365 aa25.36■■□□□ 1.65
CCM2-201ENST00000258781 NR0B1P51843 470 aaKnown RBP25.36■■□□□ 1.65
CCM2-201ENST00000258781 GAS1P54826 345 aa25.36■■□□□ 1.65
CCM2-201ENST00000258781 MED22Q15528 200 aa25.36■■□□□ 1.65
CCM2-201ENST00000258781 C3orf38Q5JPI3 329 aa25.36■■□□□ 1.65
CCM2-201ENST00000258781 ANKRD37Q7Z713 158 aa25.36■■□□□ 1.65
CCM2-201ENST00000258781 PROKR2Q8NFJ6 384 aa25.36■■□□□ 1.65
CCM2-201ENST00000258781 PHOSPHO1Q8TCT1 267 aa25.36■■□□□ 1.65
CCM2-201ENST00000258781 LGALS12Q96DT0 336 aa25.36■■□□□ 1.65
CCM2-201ENST00000258781 ADOQ96SZ5 270 aa25.36■■□□□ 1.65
CCM2-201ENST00000258781 MGLLQ99685 303 aa25.36■■□□□ 1.65
CCM2-201ENST00000258781 IRF2BPLQ9H1B7 796 aa25.36■■□□□ 1.65
CCM2-201ENST00000258781 IL20RAQ9UHF4 553 aa25.36■■□□□ 1.65
CCM2-201ENST00000258781 ICAM5Q9UMF0 924 aa25.36■■□□□ 1.65
CCM2-201ENST00000258781 VSTM2BA6NLU5 285 aa25.35■■□□□ 1.65
CCM2-201ENST00000258781 IDSB3KWA1 339 aa25.35■■□□□ 1.65
CCM2-201ENST00000258781 MTNR1AP48039 350 aa25.35■■□□□ 1.65
CCM2-201ENST00000258781 RGS6P49758 472 aa25.35■■□□□ 1.65
CCM2-201ENST00000258781 IL11RAQ14626 422 aa25.35■■□□□ 1.65
CCM2-201ENST00000258781 FAAH2Q6GMR7 532 aa25.35■■□□□ 1.65
CCM2-201ENST00000258781 WBP2NLQ6ICG8 309 aa25.35■■□□□ 1.65
CCM2-201ENST00000258781 NANOGP1Q8N7R0 232 aa25.35■■□□□ 1.65
CCM2-201ENST00000258781 AGBL5Q8NDL9 886 aa25.35■■□□□ 1.65
CCM2-201ENST00000258781 TBC1D15Q8TC07 691 aa25.35■■□□□ 1.65
CCM2-201ENST00000258781 RNFT2Q96EX2 444 aa25.35■■□□□ 1.65
CCM2-201ENST00000258781 CDC6Q99741 560 aa25.35■■□□□ 1.65
CCM2-201ENST00000258781 CTRCQ99895 268 aa25.35■■□□□ 1.65
CCM2-201ENST00000258781 NRSN2Q9GZP1 204 aa25.35■■□□□ 1.65
CCM2-201ENST00000258781 FN3KQ9H479 309 aa25.35■■□□□ 1.65
CCM2-201ENST00000258781 ZNF264O43296 627 aa25.34■■□□□ 1.65
CCM2-201ENST00000258781 ALOX12BO75342 701 aa25.34■■□□□ 1.65
CCM2-201ENST00000258781 CCL4P13236 92 aa25.34■■□□□ 1.65
CCM2-201ENST00000258781 INSM1Q01101 510 aaPredicted RBP25.34■■□□□ 1.65
CCM2-201ENST00000258781 PLCXD2Q0VAA5 305 aa25.34■■□□□ 1.65
CCM2-201ENST00000258781 STPG1Q5TH74 334 aa25.34■■□□□ 1.65
CCM2-201ENST00000258781 NXNL2Q5VZ03 156 aa25.34■■□□□ 1.65
CCM2-201ENST00000258781 APOOLQ6UXV4 268 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms