RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 SELPLGQ14242 412 aa17.71■□□□□ 0.43
PTPRE-201ENST00000254667 ADAMTS14Q8WXS8 1223 aa17.71■□□□□ 0.43
PTPRE-201ENST00000254667 NLKQ9UBE8 527 aa17.71■□□□□ 0.43
PTPRE-201ENST00000254667 SYT5O00445 386 aa17.71■□□□□ 0.43
PTPRE-201ENST00000254667 TFPTP0C1Z6 253 aa17.71■□□□□ 0.43
PTPRE-201ENST00000254667 EIF2S3P41091 472 aaKnown RBP17.71■□□□□ 0.43
PTPRE-201ENST00000254667 MRPL58Q14197 206 aaKnown RBP17.71■□□□□ 0.43
PTPRE-201ENST00000254667 TMEM240Q5SV17 173 aa17.71■□□□□ 0.43
PTPRE-201ENST00000254667 Q6ZSR9 355 aa17.71■□□□□ 0.43
PTPRE-201ENST00000254667 LSM14AQ8ND56 463 aaKnown RBP17.71■□□□□ 0.43
PTPRE-201ENST00000254667 SLC2A12Q8TD20 617 aa17.71■□□□□ 0.43
PTPRE-201ENST00000254667 ZFPM2Q8WW38 1151 aa17.71■□□□□ 0.43
PTPRE-201ENST00000254667 ASIC5Q9NY37 505 aa17.71■□□□□ 0.43
PTPRE-201ENST00000254667 MRPL15Q9P015 296 aaKnown RBP17.71■□□□□ 0.43
PTPRE-201ENST00000254667 DCDC2BA2VCK2 349 aa17.7■□□□□ 0.42
PTPRE-201ENST00000254667 SLC35E2P0CK97 266 aa17.7■□□□□ 0.42
PTPRE-201ENST00000254667 POLR2HP52434 150 aaKnown RBP17.7■□□□□ 0.42
PTPRE-201ENST00000254667 SPRED3Q2MJR0 410 aa17.7■□□□□ 0.42
PTPRE-201ENST00000254667 PCGF3Q3KNV8 242 aa17.7■□□□□ 0.42
PTPRE-201ENST00000254667 TECPR1Q7Z6L1 1165 aa17.7■□□□□ 0.42
PTPRE-201ENST00000254667 OR2T11Q8NH01 316 aa17.7■□□□□ 0.42
PTPRE-201ENST00000254667 SLC38A5Q8WUX1 472 aa17.7■□□□□ 0.42
PTPRE-201ENST00000254667 SNAPC3Q92966 411 aa17.7■□□□□ 0.42
PTPRE-201ENST00000254667 C20orf27Q9GZN8 174 aa17.7■□□□□ 0.42
PTPRE-201ENST00000254667 CARD8Q9Y2G2 431 aa17.7■□□□□ 0.42
PTPRE-201ENST00000254667 AK6Q9Y3D8 172 aaKnown RBP17.7■□□□□ 0.42
PTPRE-201ENST00000254667 FAM155AB1AL88 458 aaPredicted RBP17.7■□□□□ 0.42
PTPRE-201ENST00000254667 ERV3-1Q14264 604 aa17.7■□□□□ 0.42
PTPRE-201ENST00000254667 ZFP90Q8TF47 636 aa17.7■□□□□ 0.42
PTPRE-201ENST00000254667 SLC46A1Q96NT5 459 aa17.7■□□□□ 0.42
PTPRE-201ENST00000254667 ARL6Q9H0F7 186 aa17.7■□□□□ 0.42
PTPRE-201ENST00000254667 TP53P04637 393 aaPredicted RBP17.7■□□□□ 0.42
PTPRE-201ENST00000254667 CA5AP35218 305 aa17.7■□□□□ 0.42
PTPRE-201ENST00000254667 CNIH2Q6PI25 160 aa17.7■□□□□ 0.42
PTPRE-201ENST00000254667 CMTM1Q8IZ96 169 aa17.7■□□□□ 0.42
PTPRE-201ENST00000254667 PHB2Q99623 299 aa17.7■□□□□ 0.42
PTPRE-201ENST00000254667 C7orf50Q9BRJ6 194 aaKnown RBP17.7■□□□□ 0.42
PTPRE-201ENST00000254667 SERINC4A6NH21 518 aa17.7■□□□□ 0.42
PTPRE-201ENST00000254667 HTR2AP28223 471 aa17.7■□□□□ 0.42
PTPRE-201ENST00000254667 OPRD1P41143 372 aa17.7■□□□□ 0.42
PTPRE-201ENST00000254667 RGS19P49795 217 aa17.7■□□□□ 0.42
PTPRE-201ENST00000254667 SLC35F3Q8IY50 421 aa17.7■□□□□ 0.42
PTPRE-201ENST00000254667 OR7G1Q8NGA0 311 aa17.7■□□□□ 0.42
PTPRE-201ENST00000254667 ABHD5Q8WTS1 349 aa17.7■□□□□ 0.42
PTPRE-201ENST00000254667 NRG4Q8WWG1 115 aa17.7■□□□□ 0.42
PTPRE-201ENST00000254667 NEURL3Q96EH8 262 aa17.7■□□□□ 0.42
PTPRE-201ENST00000254667 SPIN2AQ99865 258 aa17.7■□□□□ 0.42
PTPRE-201ENST00000254667 SPIN2BQ9BPZ2 258 aa17.7■□□□□ 0.42
PTPRE-201ENST00000254667 WDR83Q9BRX9 315 aaKnown RBP17.7■□□□□ 0.42
PTPRE-201ENST00000254667 P2RY12Q9H244 342 aa17.7■□□□□ 0.42
PTPRE-201ENST00000254667 APMAPQ9HDC9 416 aa17.7■□□□□ 0.42
PTPRE-201ENST00000254667 A4GALTQ9NPC4 353 aa17.7■□□□□ 0.42
PTPRE-201ENST00000254667 TOGARAM1Q9Y4F4 1720 aa17.7■□□□□ 0.42
PTPRE-201ENST00000254667 SIGLEC6O43699 453 aa17.69■□□□□ 0.42
PTPRE-201ENST00000254667 GPRIN2O60269 458 aa17.69■□□□□ 0.42
PTPRE-201ENST00000254667 PRAF2O60831 178 aa17.69■□□□□ 0.42
PTPRE-201ENST00000254667 PTHP01270 115 aa17.69■□□□□ 0.42
PTPRE-201ENST00000254667 FNTBP49356 437 aa17.69■□□□□ 0.42
PTPRE-201ENST00000254667 RRADP55042 308 aa17.69■□□□□ 0.42
PTPRE-201ENST00000254667 ADIPOR2Q86V24 386 aa17.69■□□□□ 0.42
PTPRE-201ENST00000254667 C4orf36Q96KX1 117 aa17.69■□□□□ 0.42
PTPRE-201ENST00000254667 HYLS1Q96M11 299 aa17.69■□□□□ 0.42
PTPRE-201ENST00000254667 SLAMF8Q9P0V8 285 aa17.69■□□□□ 0.42
PTPRE-201ENST00000254667 SLX4Q8IY92 1834 aa17.69■□□□□ 0.42
PTPRE-201ENST00000254667 TNFSF4P23510 183 aa17.69■□□□□ 0.42
PTPRE-201ENST00000254667 RPS5P46782 204 aaKnown RBP17.69■□□□□ 0.42
PTPRE-201ENST00000254667 FAM69AQ5T7M9 428 aa17.69■□□□□ 0.42
PTPRE-201ENST00000254667 HACD4Q5VWC8 232 aa17.69■□□□□ 0.42
PTPRE-201ENST00000254667 RETREG3Q86VR2 466 aa17.69■□□□□ 0.42
PTPRE-201ENST00000254667 SLC15A4Q8N697 577 aa17.69■□□□□ 0.42
PTPRE-201ENST00000254667 WFDC5Q8TCV5 224 aa17.69■□□□□ 0.42
PTPRE-201ENST00000254667 NHSQ6T4R5 1651 aa17.69■□□□□ 0.42
PTPRE-201ENST00000254667 POU3F1Q03052 451 aaPredicted RBP17.69■□□□□ 0.42
PTPRE-201ENST00000254667 PGM2L1Q6PCE3 622 aa17.69■□□□□ 0.42
PTPRE-201ENST00000254667 TRAPPC6BQ86SZ2 158 aa17.69■□□□□ 0.42
PTPRE-201ENST00000254667 NDNFQ8TB73 568 aa17.69■□□□□ 0.42
PTPRE-201ENST00000254667 CD300LFQ8TDQ1 290 aa17.69■□□□□ 0.42
PTPRE-201ENST00000254667 TM4SF18Q96CE8 201 aa17.69■□□□□ 0.42
PTPRE-201ENST00000254667 ZNF583Q96ND8 569 aa17.69■□□□□ 0.42
PTPRE-201ENST00000254667 ULBP2Q9BZM5 246 aa17.69■□□□□ 0.42
PTPRE-201ENST00000254667 OR2S2Q9NQN1 319 aa17.69■□□□□ 0.42
PTPRE-201ENST00000254667 MOKQ9UQ07 419 aa17.69■□□□□ 0.42
PTPRE-201ENST00000254667 V9GY05 133 aa17.69■□□□□ 0.42
PTPRE-201ENST00000254667 MYH7BA7E2Y1 1941 aa17.69■□□□□ 0.42
PTPRE-201ENST00000254667 TVP23AA6NH52 213 aa17.69■□□□□ 0.42
PTPRE-201ENST00000254667 NUDT7P0C024 238 aa17.69■□□□□ 0.42
PTPRE-201ENST00000254667 B3GNT8Q7Z7M8 397 aa17.69■□□□□ 0.42
PTPRE-201ENST00000254667 VRK3Q8IV63 474 aa17.69■□□□□ 0.42
PTPRE-201ENST00000254667 GATA6Q92908 595 aa17.69■□□□□ 0.42
PTPRE-201ENST00000254667 LCORQ96JN0 433 aaPredicted RBP17.69■□□□□ 0.42
PTPRE-201ENST00000254667 LYSMD1Q96S90 227 aa17.69■□□□□ 0.42
PTPRE-201ENST00000254667 PHIPQ8WWQ0 1821 aa17.69■□□□□ 0.42
PTPRE-201ENST00000254667 ZDHHC11BP0C7U3 371 aa17.68■□□□□ 0.42
PTPRE-201ENST00000254667 ARSBP15848 533 aa17.68■□□□□ 0.42
PTPRE-201ENST00000254667 PRKAR1BP31321 381 aa17.68■□□□□ 0.42
PTPRE-201ENST00000254667 UQCRC1P31930 480 aa17.68■□□□□ 0.42
PTPRE-201ENST00000254667 HSD17B7P56937 341 aa17.68■□□□□ 0.42
PTPRE-201ENST00000254667 CSNK1G2P78368 415 aa17.68■□□□□ 0.42
PTPRE-201ENST00000254667 MAT1AQ00266 395 aaKnown RBP17.68■□□□□ 0.42
PTPRE-201ENST00000254667 IL20RBQ6UXL0 311 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms