RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 NKPD1Q17RQ9 610 aa8.15□□□□□ -1.11
PTCD3-201ENST00000254630 ZNF691Q5VV52 312 aa8.15□□□□□ -1.11
PTCD3-201ENST00000254630 OR5M10Q6IEU7 315 aa8.15□□□□□ -1.11
PTCD3-201ENST00000254630 MISPQ8IVT2 679 aa8.15□□□□□ -1.11
PTCD3-201ENST00000254630 PPP1R35Q8TAP8 253 aa8.15□□□□□ -1.11
PTCD3-201ENST00000254630 DCUN1D4Q92564 292 aa8.15□□□□□ -1.11
PTCD3-201ENST00000254630 PBDC1Q9BVG4 233 aa8.15□□□□□ -1.11
PTCD3-201ENST00000254630 OR2S2Q9NQN1 319 aa8.15□□□□□ -1.11
PTCD3-201ENST00000254630 A0A1W2PQL4 384 aaPredicted RBP8.14□□□□□ -1.11
PTCD3-201ENST00000254630 FAM155AB1AL88 458 aaPredicted RBP8.14□□□□□ -1.11
PTCD3-201ENST00000254630 GPR75O95800 540 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 SERPINA2P20848 420 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 GABRA2P47869 451 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 GK2Q14410 553 aaPredicted RBP8.14□□□□□ -1.11
PTCD3-201ENST00000254630 GPR157Q5UAW9 335 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 RTL6Q6ICC9 239 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 ZNF578Q96N58 590 aaPredicted RBP8.14□□□□□ -1.11
PTCD3-201ENST00000254630 GAREM1Q9H706 876 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 IL37Q9NZH6 218 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 HS3ST2Q9Y278 367 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 RHBDD3Q9Y3P4 386 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 CLDN17P56750 224 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 RAB40BQ12829 278 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 ARL6IP1Q15041 203 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 PLAG1Q6DJT9 500 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 B3GNT8Q7Z7M8 397 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 GPR149Q86SP6 731 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 SGPP2Q8IWX5 399 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 SLC2A12Q8TD20 617 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 ADAMTS19Q8TE59 1207 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 C22orf15Q8WYQ4 148 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 SYT11Q9BT88 431 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 MRI1Q9BV20 369 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 FAIMQ9NVQ4 179 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 RLIMQ9NVW2 624 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 GPR160Q9UJ42 338 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 B3GNT3Q9Y2A9 372 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 TNRC6CQ9HCJ0 1690 aaKnown RBP8.14□□□□□ -1.11
PTCD3-201ENST00000254630 LOXHD1Q8IVV2 1947 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 ARNTLO00327 626 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 HTR2AP28223 471 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 HSD17B7P56937 341 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 PGGHGQ32M88 737 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 AKR1C8PQ5T2L2 129 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 SLC6A19Q695T7 634 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 TMEM174Q8WUU8 243 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 ZFPM2Q8WW38 1151 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 SNAPC3Q92966 411 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 C3orf30Q96M34 536 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 PPP1R14DQ9NXH3 145 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 OBP2AQ9NY56 170 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 THAP10Q9P2Z0 257 aaPredicted RBP8.14□□□□□ -1.11
PTCD3-201ENST00000254630 DCDC2BA2VCK2 349 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 ARGFXA6NJG6 315 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 CDK1P06493 297 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 DNASE1P24855 282 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 CSNK1EP49674 416 aaKnown RBP8.14□□□□□ -1.11
PTCD3-201ENST00000254630 PRKXP51817 358 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 TMEM31Q5JXX7 168 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 MRPL2Q5T653 305 aaKnown RBP8.14□□□□□ -1.11
PTCD3-201ENST00000254630 NIPAL3Q6P499 406 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 PAQR9Q6ZVX9 377 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 NDUFAF7Q7L592 441 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 DPY19L4Q7Z388 723 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 FAM160A2Q8N612 972 aaPredicted RBP8.14□□□□□ -1.11
PTCD3-201ENST00000254630 AGBL5Q8NDL9 886 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 TMEM246Q9BRR3 403 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 DPCDQ9BVM2 203 aaPredicted RBP8.14□□□□□ -1.11
PTCD3-201ENST00000254630 ANKRD60Q9BZ19 345 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 ZNF223Q9UK11 482 aaPredicted RBP8.14□□□□□ -1.11
PTCD3-201ENST00000254630 NOSIPQ9Y314 301 aaKnown RBP8.14□□□□□ -1.11
PTCD3-201ENST00000254630 MEIS3P1A6NDR6 274 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 TRAPPC2LH3BP13 241 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 MRPL33O75394 65 aaKnown RBP8.14□□□□□ -1.11
PTCD3-201ENST00000254630 UTS2O95399 124 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 TAS2R20P59543 309 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 C9orf135Q5VTT2 229 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 KCTD20Q7Z5Y7 419 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 GRAMD2AQ8IUY3 354 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 MMP21Q8N119 569 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 DNAJC22Q8N4W6 341 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 PIGCQ92535 297 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 SNX18Q96RF0 628 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 OR52D1Q9H346 318 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 LINC01553A4QN01 128 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 HHLA1C9JL84 531 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 SLC16A7O60669 478 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 NPR2P20594 1047 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 PRSS3P35030 304 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 OR1D5P58170 312 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 CXCR4P61073 352 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 GPR18Q14330 331 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 BCL7AQ4VC05 210 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 CBLL1Q75N03 491 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 KIR3DX1Q9H7L2 352 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 SLC6A20Q9NP91 592 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 VAPAQ9P0L0 249 aa8.14□□□□□ -1.11
PTCD3-201ENST00000254630 INTS6Q9UL03 887 aaKnown RBP8.14□□□□□ -1.11
PTCD3-201ENST00000254630 TVP23AA6NH52 213 aa8.13□□□□□ -1.11
PTCD3-201ENST00000254630 TIMM8AO60220 97 aaPredicted RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms