RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 OR8J2Q8NGG1 315 aa18.71■□□□□ 0.59
NEDD8-201ENST00000250495 ST8SIA1Q92185 356 aa18.71■□□□□ 0.59
NEDD8-201ENST00000250495 ZNF524Q96C55 264 aa18.71■□□□□ 0.59
NEDD8-201ENST00000250495 DPY30Q9C005 99 aa18.71■□□□□ 0.59
NEDD8-201ENST00000250495 AKTIPQ9H8T0 292 aa18.71■□□□□ 0.59
NEDD8-201ENST00000250495 MKLN1Q9UL63 735 aa18.71■□□□□ 0.59
NEDD8-201ENST00000250495 RNF115Q9Y4L5 304 aa18.71■□□□□ 0.59
NEDD8-201ENST00000250495 NSD1Q96L73 2696 aaPredicted RBP18.71■□□□□ 0.59
NEDD8-201ENST00000250495 IGHV3-15A0A0B4J1V0 119 aa18.7■□□□□ 0.58
NEDD8-201ENST00000250495 DNAJA2O60884 412 aa18.7■□□□□ 0.58
NEDD8-201ENST00000250495 SNUPNO95149 360 aaKnown RBP18.7■□□□□ 0.58
NEDD8-201ENST00000250495 CSTAP01040 98 aa18.7■□□□□ 0.58
NEDD8-201ENST00000250495 CD3EP07766 207 aa18.7■□□□□ 0.58
NEDD8-201ENST00000250495 MYZAPP0CAP1 466 aa18.7■□□□□ 0.58
NEDD8-201ENST00000250495 PGCP20142 388 aa18.7■□□□□ 0.58
NEDD8-201ENST00000250495 ATP5J2P56134 94 aa18.7■□□□□ 0.58
NEDD8-201ENST00000250495 RASGEF1BQ0VAM2 473 aa18.7■□□□□ 0.58
NEDD8-201ENST00000250495 CAPRIN1Q14444 709 aaKnown RBP18.7■□□□□ 0.58
NEDD8-201ENST00000250495 TSC22D1Q15714 1073 aa18.7■□□□□ 0.58
NEDD8-201ENST00000250495 TAB1Q15750 504 aa18.7■□□□□ 0.58
NEDD8-201ENST00000250495 PDCD2Q16342 344 aaPredicted RBP18.7■□□□□ 0.58
NEDD8-201ENST00000250495 NCMAPQ5T1S8 102 aa18.7■□□□□ 0.58
NEDD8-201ENST00000250495 EIF3MQ7L2H7 374 aaKnown RBP18.7■□□□□ 0.58
NEDD8-201ENST00000250495 OR4A15Q8NGL6 344 aa18.7■□□□□ 0.58
NEDD8-201ENST00000250495 RAB3IL1Q8TBN0 382 aa18.7■□□□□ 0.58
NEDD8-201ENST00000250495 OR5B2Q96R09 309 aa18.7■□□□□ 0.58
NEDD8-201ENST00000250495 PSD2Q9BQI7 771 aa18.7■□□□□ 0.58
NEDD8-201ENST00000250495 SERHL2Q9H4I8 314 aa18.7■□□□□ 0.58
NEDD8-201ENST00000250495 KCNE5Q9UJ90 142 aa18.7■□□□□ 0.58
NEDD8-201ENST00000250495 LAMP3Q9UQV4 416 aa18.7■□□□□ 0.58
NEDD8-201ENST00000250495 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.7■□□□□ 0.58
NEDD8-201ENST00000250495 PRSS51A0A1B0GVH4 220 aa18.69■□□□□ 0.58
NEDD8-201ENST00000250495 WDR91A4D1P6 747 aa18.69■□□□□ 0.58
NEDD8-201ENST00000250495 ZNF814B7Z6K7 855 aa18.69■□□□□ 0.58
NEDD8-201ENST00000250495 BIRC5O15392 142 aa18.69■□□□□ 0.58
NEDD8-201ENST00000250495 ITM2AO43736 263 aa18.69■□□□□ 0.58
NEDD8-201ENST00000250495 CYTIPO60759 359 aa18.69■□□□□ 0.58
NEDD8-201ENST00000250495 UGT2B17O75795 530 aa18.69■□□□□ 0.58
NEDD8-201ENST00000250495 SERPINE1P05121 402 aa18.69■□□□□ 0.58
NEDD8-201ENST00000250495 GUSBP08236 651 aa18.69■□□□□ 0.58
NEDD8-201ENST00000250495 OR3A2P47893 321 aa18.69■□□□□ 0.58
NEDD8-201ENST00000250495 SESN3P58005 492 aa18.69■□□□□ 0.58
NEDD8-201ENST00000250495 ABCE1P61221 599 aaKnown RBP18.69■□□□□ 0.58
NEDD8-201ENST00000250495 RPS4XP62701 263 aaKnown RBP18.69■□□□□ 0.58
NEDD8-201ENST00000250495 SKP2Q13309 424 aa18.69■□□□□ 0.58
NEDD8-201ENST00000250495 CHI3L2Q15782 390 aa18.69■□□□□ 0.58
NEDD8-201ENST00000250495 ATAD3BQ5T9A4 648 aa18.69■□□□□ 0.58
NEDD8-201ENST00000250495 ANXA8L1Q5VT79 327 aa18.69■□□□□ 0.58
NEDD8-201ENST00000250495 Q6ZT83 130 aa18.69■□□□□ 0.58
NEDD8-201ENST00000250495 BHLHA15Q7RTS1 189 aaPredicted RBP18.69■□□□□ 0.58
NEDD8-201ENST00000250495 CLEC4FQ8N1N0 589 aa18.69■□□□□ 0.58
NEDD8-201ENST00000250495 ZNF781Q8N8C0 355 aa18.69■□□□□ 0.58
NEDD8-201ENST00000250495 MIPOL1Q8TD10 442 aa18.69■□□□□ 0.58
NEDD8-201ENST00000250495 OIT3Q8WWZ8 545 aa18.69■□□□□ 0.58
NEDD8-201ENST00000250495 PKNOX2Q96KN3 472 aa18.69■□□□□ 0.58
NEDD8-201ENST00000250495 PPP1R36Q96LQ0 422 aa18.69■□□□□ 0.58
NEDD8-201ENST00000250495 ZNF350Q9GZX5 532 aa18.69■□□□□ 0.58
NEDD8-201ENST00000250495 OR51I1Q9H343 314 aa18.69■□□□□ 0.58
NEDD8-201ENST00000250495 RAP2CQ9Y3L5 183 aa18.69■□□□□ 0.58
NEDD8-201ENST00000250495 FN1P02751 2386 aaKnown RBP18.69■□□□□ 0.58
NEDD8-201ENST00000250495 CSPG4Q6UVK1 2322 aa18.68■□□□□ 0.58
NEDD8-201ENST00000250495 ZNF724A8MTY0 619 aa18.68■□□□□ 0.58
NEDD8-201ENST00000250495 CLOCKO15516 846 aa18.68■□□□□ 0.58
NEDD8-201ENST00000250495 CPSF4O95639 269 aaKnown RBP18.68■□□□□ 0.58
NEDD8-201ENST00000250495 FESP07332 822 aa18.68■□□□□ 0.58
NEDD8-201ENST00000250495 UBTFL6P0CB48 400 aaPredicted RBP18.68■□□□□ 0.58
NEDD8-201ENST00000250495 UQCRC2P22695 453 aa18.68■□□□□ 0.58
NEDD8-201ENST00000250495 RPL14P50914 215 aaKnown RBP18.68■□□□□ 0.58
NEDD8-201ENST00000250495 CSNK2A1P68400 391 aaPredicted RBP18.68■□□□□ 0.58
NEDD8-201ENST00000250495 MERTKQ12866 999 aa18.68■□□□□ 0.58
NEDD8-201ENST00000250495 HEPHL1Q6MZM0 1159 aa18.68■□□□□ 0.58
NEDD8-201ENST00000250495 TMPPEQ6ZT21 453 aa18.68■□□□□ 0.58
NEDD8-201ENST00000250495 KIRREL3Q8IZU9 778 aa18.68■□□□□ 0.58
NEDD8-201ENST00000250495 XAGE5Q8WWM1 108 aa18.68■□□□□ 0.58
NEDD8-201ENST00000250495 FBXW5Q969U6 566 aa18.68■□□□□ 0.58
NEDD8-201ENST00000250495 TRMT61AQ96FX7 289 aaKnown RBP18.68■□□□□ 0.58
NEDD8-201ENST00000250495 POTEKPQ9BYX7 375 aa18.68■□□□□ 0.58
NEDD8-201ENST00000250495 QRSL1Q9H0R6 528 aaKnown RBP18.68■□□□□ 0.58
NEDD8-201ENST00000250495 POLE3Q9NRF9 147 aa18.68■□□□□ 0.58
NEDD8-201ENST00000250495 ACER3Q9NUN7 267 aa18.68■□□□□ 0.58
NEDD8-201ENST00000250495 ING1Q9UK53 422 aaPredicted RBP18.68■□□□□ 0.58
NEDD8-201ENST00000250495 SLC35A3Q9Y2D2 325 aa18.68■□□□□ 0.58
NEDD8-201ENST00000250495 HIVEP2P31629 2446 aa18.67■□□□□ 0.58
NEDD8-201ENST00000250495 SMAD9O15198 467 aaKnown RBP18.67■□□□□ 0.58
NEDD8-201ENST00000250495 RGS16O15492 202 aaPredicted RBP18.67■□□□□ 0.58
NEDD8-201ENST00000250495 SCN2BO60939 215 aa18.67■□□□□ 0.58
NEDD8-201ENST00000250495 H6PDO95479 791 aa18.67■□□□□ 0.58
NEDD8-201ENST00000250495 OR12D1P0DN82 309 aa18.67■□□□□ 0.58
NEDD8-201ENST00000250495 KRT71Q3SY84 523 aa18.67■□□□□ 0.58
NEDD8-201ENST00000250495 AP1ARQ63HQ0 302 aa18.67■□□□□ 0.58
NEDD8-201ENST00000250495 SSX8Q7RTT4 187 aa18.67■□□□□ 0.58
NEDD8-201ENST00000250495 GALNT5Q7Z7M9 940 aa18.67■□□□□ 0.58
NEDD8-201ENST00000250495 MREGQ8N565 214 aa18.67■□□□□ 0.58
NEDD8-201ENST00000250495 LILRB1Q8NHL6 650 aaPredicted RBP18.67■□□□□ 0.58
NEDD8-201ENST00000250495 PIWIL2Q8TC59 973 aaKnown RBP18.67■□□□□ 0.58
NEDD8-201ENST00000250495 SLC25A43Q8WUT9 341 aaPredicted RBP18.67■□□□□ 0.58
NEDD8-201ENST00000250495 SSU72Q9NP77 194 aaKnown RBP18.67■□□□□ 0.58
NEDD8-201ENST00000250495 WDR45Q9Y484 360 aa18.67■□□□□ 0.58
NEDD8-201ENST00000250495 SPIN1Q9Y657 262 aaPredicted RBP18.67■□□□□ 0.58
NEDD8-201ENST00000250495 TLN2Q9Y4G6 2542 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms