RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 SLC25A37Q9NYZ2 338 aa11.47□□□□□ -0.57
VPREB3-201ENST00000248948 LEF1Q9UJU2 399 aaPredicted RBP11.47□□□□□ -0.57
VPREB3-201ENST00000248948 PRDM4Q9UKN5 801 aa11.47□□□□□ -0.57
VPREB3-201ENST00000248948 SPIN1Q9Y657 262 aaPredicted RBP11.47□□□□□ -0.57
VPREB3-201ENST00000248948 TNFSF11O14788 317 aa11.46□□□□□ -0.57
VPREB3-201ENST00000248948 ANGPT2O15123 496 aa11.46□□□□□ -0.57
VPREB3-201ENST00000248948 CYP7B1O75881 506 aa11.46□□□□□ -0.57
VPREB3-201ENST00000248948 SYNGR4O95473 234 aa11.46□□□□□ -0.57
VPREB3-201ENST00000248948 UQCRBP14927 111 aa11.46□□□□□ -0.57
VPREB3-201ENST00000248948 IL7RP16871 459 aa11.46□□□□□ -0.57
VPREB3-201ENST00000248948 UQCRC1P31930 480 aa11.46□□□□□ -0.57
VPREB3-201ENST00000248948 ZNF239Q16600 458 aaKnown RBP11.46□□□□□ -0.57
VPREB3-201ENST00000248948 PAGE3Q5JUK9 113 aa11.46□□□□□ -0.57
VPREB3-201ENST00000248948 MRPL2Q5T653 305 aaKnown RBP11.46□□□□□ -0.57
VPREB3-201ENST00000248948 HBMQ6B0K9 141 aa11.46□□□□□ -0.57
VPREB3-201ENST00000248948 PLXDC2Q6UX71 529 aa11.46□□□□□ -0.57
VPREB3-201ENST00000248948 GRINAQ7Z429 371 aa11.46□□□□□ -0.57
VPREB3-201ENST00000248948 KIF18BQ86Y91 864 aa11.46□□□□□ -0.57
VPREB3-201ENST00000248948 ZNF440Q8IYI8 595 aa11.46□□□□□ -0.57
VPREB3-201ENST00000248948 ZNF295-AS1Q8N0V1 137 aa11.46□□□□□ -0.57
VPREB3-201ENST00000248948 DPP10Q8N608 796 aa11.46□□□□□ -0.57
VPREB3-201ENST00000248948 BBS10Q8TAM1 723 aa11.46□□□□□ -0.57
VPREB3-201ENST00000248948 RNF128Q8TEB7 428 aa11.46□□□□□ -0.57
VPREB3-201ENST00000248948 TMEM19Q96HH6 336 aa11.46□□□□□ -0.57
VPREB3-201ENST00000248948 GMPPAQ96IJ6 420 aaPredicted RBP11.46□□□□□ -0.57
VPREB3-201ENST00000248948 CACYBPQ9HB71 228 aaKnown RBP11.46□□□□□ -0.57
VPREB3-201ENST00000248948 BCL2L10Q9HD36 194 aa11.46□□□□□ -0.57
VPREB3-201ENST00000248948 TIGARQ9NQ88 270 aa11.46□□□□□ -0.57
VPREB3-201ENST00000248948 GLRX2Q9NS18 164 aa11.46□□□□□ -0.57
VPREB3-201ENST00000248948 MPDZO75970 2070 aa11.46□□□□□ -0.57
VPREB3-201ENST00000248948 A0A0G2JPF8 293 aa11.45□□□□□ -0.58
VPREB3-201ENST00000248948 A0A0J9YW62 118 aa11.45□□□□□ -0.58
VPREB3-201ENST00000248948 CDHR4A6H8M9 788 aa11.45□□□□□ -0.58
VPREB3-201ENST00000248948 CLDN24A6NM45 220 aa11.45□□□□□ -0.58
VPREB3-201ENST00000248948 HNRNPCL2B2RXH8 293 aa11.45□□□□□ -0.58
VPREB3-201ENST00000248948 HNRNPCL3B7ZW38 293 aa11.45□□□□□ -0.58
VPREB3-201ENST00000248948 MSTNO14793 375 aa11.45□□□□□ -0.58
VPREB3-201ENST00000248948 CXCL13O43927 109 aa11.45□□□□□ -0.58
VPREB3-201ENST00000248948 HNRNPCL1O60812 293 aaKnown RBP11.45□□□□□ -0.58
VPREB3-201ENST00000248948 SS18L1O75177 396 aaPredicted RBP11.45□□□□□ -0.58
VPREB3-201ENST00000248948 BCAS1O75363 584 aaPredicted RBP11.45□□□□□ -0.58
VPREB3-201ENST00000248948 AQP8O94778 261 aa11.45□□□□□ -0.58
VPREB3-201ENST00000248948 VIMP08670 466 aaKnown RBP11.45□□□□□ -0.58
VPREB3-201ENST00000248948 PABPC4LP0CB38 370 aaKnown RBP11.45□□□□□ -0.58
VPREB3-201ENST00000248948 HNRNPCL4P0DMR1 293 aa11.45□□□□□ -0.58
VPREB3-201ENST00000248948 CD8BP10966 210 aa11.45□□□□□ -0.58
VPREB3-201ENST00000248948 IL11P20809 199 aa11.45□□□□□ -0.58
VPREB3-201ENST00000248948 SHC1P29353 583 aa11.45□□□□□ -0.58
VPREB3-201ENST00000248948 SLC7A1P30825 629 aa11.45□□□□□ -0.58
VPREB3-201ENST00000248948 SFTPDP35247 375 aa11.45□□□□□ -0.58
VPREB3-201ENST00000248948 APOBEC1P41238 236 aaKnown RBP11.45□□□□□ -0.58
VPREB3-201ENST00000248948 HTR3AP46098 478 aa11.45□□□□□ -0.58
VPREB3-201ENST00000248948 SESN3P58005 492 aa11.45□□□□□ -0.58
VPREB3-201ENST00000248948 GUCY1A3Q02108 690 aa11.45□□□□□ -0.58
VPREB3-201ENST00000248948 GCNT6Q5T4J0 391 aa11.45□□□□□ -0.58
VPREB3-201ENST00000248948 CGB2Q6NT52 195 aa11.45□□□□□ -0.58
VPREB3-201ENST00000248948 PLEKHM3Q6ZWE6 761 aa11.45□□□□□ -0.58
VPREB3-201ENST00000248948 DHDDSQ86SQ9 333 aa11.45□□□□□ -0.58
VPREB3-201ENST00000248948 ZNF563Q8TA94 476 aa11.45□□□□□ -0.58
VPREB3-201ENST00000248948 SLC35B4Q969S0 331 aa11.45□□□□□ -0.58
VPREB3-201ENST00000248948 ZG16BQ96DA0 208 aa11.45□□□□□ -0.58
VPREB3-201ENST00000248948 CPPED1Q9BRF8 314 aaPredicted RBP11.45□□□□□ -0.58
VPREB3-201ENST00000248948 PRRG4Q9BZD6 226 aa11.45□□□□□ -0.58
VPREB3-201ENST00000248948 COQ10BQ9H8M1 238 aa11.45□□□□□ -0.58
VPREB3-201ENST00000248948 GP6Q9HCN6 339 aa11.45□□□□□ -0.58
VPREB3-201ENST00000248948 SERINC1Q9NRX5 453 aa11.45□□□□□ -0.58
VPREB3-201ENST00000248948 VAPAQ9P0L0 249 aa11.45□□□□□ -0.58
VPREB3-201ENST00000248948 ZNF443Q9Y2A4 671 aaPredicted RBP11.45□□□□□ -0.58
VPREB3-201ENST00000248948 NDUFAF1Q9Y375 327 aa11.45□□□□□ -0.58
VPREB3-201ENST00000248948 EMC9Q9Y3B6 208 aa11.45□□□□□ -0.58
VPREB3-201ENST00000248948 TACC2O95359 2948 aa11.45□□□□□ -0.58
VPREB3-201ENST00000248948 GOSR1O95249 250 aa11.44□□□□□ -0.58
VPREB3-201ENST00000248948 ARAFP10398 606 aa11.44□□□□□ -0.58
VPREB3-201ENST00000248948 ETS2P15036 469 aa11.44□□□□□ -0.58
VPREB3-201ENST00000248948 GPX2P18283 190 aa11.44□□□□□ -0.58
VPREB3-201ENST00000248948 FKBP2P26885 142 aaKnown RBP11.44□□□□□ -0.58
VPREB3-201ENST00000248948 MDH1P40925 334 aaKnown RBP11.44□□□□□ -0.58
VPREB3-201ENST00000248948 CPA2P48052 419 aa11.44□□□□□ -0.58
VPREB3-201ENST00000248948 AGFG1P52594 562 aaKnown RBP11.44□□□□□ -0.58
VPREB3-201ENST00000248948 ARFIP2P53365 341 aa11.44□□□□□ -0.58
VPREB3-201ENST00000248948 MERTKQ12866 999 aa11.44□□□□□ -0.58
VPREB3-201ENST00000248948 MYBPHQ13203 477 aa11.44□□□□□ -0.58
VPREB3-201ENST00000248948 LARS2Q15031 903 aaKnown RBP11.44□□□□□ -0.58
VPREB3-201ENST00000248948 RNPS1Q15287 305 aaKnown RBP11.44□□□□□ -0.58
VPREB3-201ENST00000248948 SYT14P1Q58G82 188 aa11.44□□□□□ -0.58
VPREB3-201ENST00000248948 COQ5Q5HYK3 327 aa11.44□□□□□ -0.58
VPREB3-201ENST00000248948 ZNF836Q6ZNA1 936 aa11.44□□□□□ -0.58
VPREB3-201ENST00000248948 FAM214BQ7L5A3 538 aa11.44□□□□□ -0.58
VPREB3-201ENST00000248948 HMGN2P46Q86SG4 172 aa11.44□□□□□ -0.58
VPREB3-201ENST00000248948 CNEP1R1Q8N9A8 125 aa11.44□□□□□ -0.58
VPREB3-201ENST00000248948 OR6K3Q8NGY3 331 aa11.44□□□□□ -0.58
VPREB3-201ENST00000248948 OR52P1PQ8NH57 321 aa11.44□□□□□ -0.58
VPREB3-201ENST00000248948 CNOT9Q92600 299 aaKnown RBP11.44□□□□□ -0.58
VPREB3-201ENST00000248948 ZNF524Q96C55 264 aa11.44□□□□□ -0.58
VPREB3-201ENST00000248948 ZNF559Q9BR84 538 aa11.44□□□□□ -0.58
VPREB3-201ENST00000248948 TACO1Q9BSH4 297 aaKnown RBP11.44□□□□□ -0.58
VPREB3-201ENST00000248948 CCDC106Q9BWC9 280 aa11.44□□□□□ -0.58
VPREB3-201ENST00000248948 RBM24Q9BX46 236 aaKnown RBP11.44□□□□□ -0.58
VPREB3-201ENST00000248948 TMEM38AQ9H6F2 299 aa11.44□□□□□ -0.58
VPREB3-201ENST00000248948 ARMC7Q9H6L4 198 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms