RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 CLDN22Q8N7P3 220 aa13.91□□□□□ -0.18
HDHD3-201ENST00000238379 TEX47Q8TBZ9 253 aa13.91□□□□□ -0.18
HDHD3-201ENST00000238379 M1APQ8TC57 530 aa13.91□□□□□ -0.18
HDHD3-201ENST00000238379 TRUB1Q8WWH5 349 aaKnown RBP13.91□□□□□ -0.18
HDHD3-201ENST00000238379 SH3YL1Q96HL8 342 aaPredicted RBP13.91□□□□□ -0.18
HDHD3-201ENST00000238379 NODALQ96S42 347 aa13.91□□□□□ -0.18
HDHD3-201ENST00000238379 DPH1Q9BZG8 443 aa13.91□□□□□ -0.18
HDHD3-201ENST00000238379 MMP25Q9NPA2 562 aa13.91□□□□□ -0.18
HDHD3-201ENST00000238379 SELENONQ9NZV5 590 aa13.91□□□□□ -0.18
HDHD3-201ENST00000238379 ICAM5Q9UMF0 924 aa13.91□□□□□ -0.18
HDHD3-201ENST00000238379 UNC119BA6NIH7 251 aa13.9□□□□□ -0.18
HDHD3-201ENST00000238379 FAM20BO75063 409 aa13.9□□□□□ -0.18
HDHD3-201ENST00000238379 OR2J2O76002 312 aa13.9□□□□□ -0.18
HDHD3-201ENST00000238379 CELA2AP08217 269 aa13.9□□□□□ -0.18
HDHD3-201ENST00000238379 FUT1P19526 365 aa13.9□□□□□ -0.18
HDHD3-201ENST00000238379 SLC6A8P48029 635 aa13.9□□□□□ -0.18
HDHD3-201ENST00000238379 SMSP52788 366 aa13.9□□□□□ -0.18
HDHD3-201ENST00000238379 SLC27A4Q6P1M0 643 aa13.9□□□□□ -0.18
HDHD3-201ENST00000238379 NUP54Q7Z3B4 507 aa13.9□□□□□ -0.18
HDHD3-201ENST00000238379 PPP1R32Q7Z5V6 425 aa13.9□□□□□ -0.18
HDHD3-201ENST00000238379 CDK20Q8IZL9 346 aa13.9□□□□□ -0.18
HDHD3-201ENST00000238379 OR8J1Q8NGP2 316 aa13.9□□□□□ -0.18
HDHD3-201ENST00000238379 OR5M3Q8NGP4 307 aa13.9□□□□□ -0.18
HDHD3-201ENST00000238379 RNF138Q8WVD3 245 aa13.9□□□□□ -0.18
HDHD3-201ENST00000238379 OSTF1Q92882 214 aa13.9□□□□□ -0.18
HDHD3-201ENST00000238379 TMIGD2Q96BF3 282 aa13.9□□□□□ -0.18
HDHD3-201ENST00000238379 IL4I1Q96RQ9 567 aa13.9□□□□□ -0.18
HDHD3-201ENST00000238379 CDH10Q9Y6N8 788 aa13.9□□□□□ -0.18
HDHD3-201ENST00000238379 NSG1A0A0A6YYJ2 146 aa13.9□□□□□ -0.18
HDHD3-201ENST00000238379 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.9□□□□□ -0.18
HDHD3-201ENST00000238379 SPAARA0A1B0GVQ0 90 aa13.9□□□□□ -0.18
HDHD3-201ENST00000238379 SMIM31A0A1B0GVY4 71 aa13.9□□□□□ -0.18
HDHD3-201ENST00000238379 SCO2O43819 266 aa13.9□□□□□ -0.18
HDHD3-201ENST00000238379 FXYD6P3P58550 94 aa13.9□□□□□ -0.18
HDHD3-201ENST00000238379 NDUFAF7Q7L592 441 aa13.9□□□□□ -0.18
HDHD3-201ENST00000238379 ATG4DQ86TL0 474 aaPredicted RBP13.9□□□□□ -0.18
HDHD3-201ENST00000238379 ESX1Q8N693 406 aa13.9□□□□□ -0.18
HDHD3-201ENST00000238379 ZNF540Q8NDQ6 660 aa13.9□□□□□ -0.18
HDHD3-201ENST00000238379 EXPH5Q8NEV8 1989 aa13.9□□□□□ -0.18
HDHD3-201ENST00000238379 OR5W2Q8NH69 310 aa13.9□□□□□ -0.18
HDHD3-201ENST00000238379 SLC22A8Q8TCC7 542 aa13.9□□□□□ -0.18
HDHD3-201ENST00000238379 AHCTF1Q8WYP5 2266 aa13.9□□□□□ -0.18
HDHD3-201ENST00000238379 TTC9Q92623 222 aa13.9□□□□□ -0.18
HDHD3-201ENST00000238379 FGF11Q92914 225 aa13.9□□□□□ -0.18
HDHD3-201ENST00000238379 TMCO6Q96DC7 493 aa13.9□□□□□ -0.18
HDHD3-201ENST00000238379 CCNL2Q96S94 520 aaPredicted RBP13.9□□□□□ -0.18
HDHD3-201ENST00000238379 TSSK6Q9BXA6 273 aa13.9□□□□□ -0.18
HDHD3-201ENST00000238379 POLDIP3Q9BY77 421 aaKnown RBP13.9□□□□□ -0.18
HDHD3-201ENST00000238379 IRF2BPLQ9H1B7 796 aa13.9□□□□□ -0.18
HDHD3-201ENST00000238379 AMBNQ9NP70 447 aa13.9□□□□□ -0.18
HDHD3-201ENST00000238379 TVP23BQ9NYZ1 205 aa13.9□□□□□ -0.18
HDHD3-201ENST00000238379 NDUFA13Q9P0J0 144 aa13.9□□□□□ -0.18
HDHD3-201ENST00000238379 ERVK-18Q9QC07 812 aa13.9□□□□□ -0.18
HDHD3-201ENST00000238379 PSORS1C1Q9UIG5 152 aa13.9□□□□□ -0.18
HDHD3-201ENST00000238379 GNB5O14775 395 aa13.89□□□□□ -0.19
HDHD3-201ENST00000238379 PRKYO43930 277 aa13.89□□□□□ -0.19
HDHD3-201ENST00000238379 TNFSF15O95150 251 aa13.89□□□□□ -0.19
HDHD3-201ENST00000238379 FBXO45P0C2W1 286 aa13.89□□□□□ -0.19
HDHD3-201ENST00000238379 FTH1P19P0C7X4 201 aa13.89□□□□□ -0.19
HDHD3-201ENST00000238379 SLC1A3P43003 542 aa13.89□□□□□ -0.19
HDHD3-201ENST00000238379 PCYT1AP49585 367 aa13.89□□□□□ -0.19
HDHD3-201ENST00000238379 NUDT6P53370 316 aa13.89□□□□□ -0.19
HDHD3-201ENST00000238379 SSPNQ14714 243 aa13.89□□□□□ -0.19
HDHD3-201ENST00000238379 CLEC12AQ5QGZ9 265 aa13.89□□□□□ -0.19
HDHD3-201ENST00000238379 TMEM201Q5SNT2 666 aa13.89□□□□□ -0.19
HDHD3-201ENST00000238379 XAF1Q6GPH4 301 aa13.89□□□□□ -0.19
HDHD3-201ENST00000238379 TCEANCQ8N8B7 351 aa13.89□□□□□ -0.19
HDHD3-201ENST00000238379 OR4Q3Q8NH05 313 aa13.89□□□□□ -0.19
HDHD3-201ENST00000238379 BRIX1Q8TDN6 353 aaKnown RBP13.89□□□□□ -0.19
HDHD3-201ENST00000238379 IPCEF1Q8WWN9 437 aaPredicted RBP13.89□□□□□ -0.19
HDHD3-201ENST00000238379 SIGLEC11Q96RL6 698 aa13.89□□□□□ -0.19
HDHD3-201ENST00000238379 RASL10BQ96S79 203 aa13.89□□□□□ -0.19
HDHD3-201ENST00000238379 ADAM19Q9H013 955 aa13.89□□□□□ -0.19
HDHD3-201ENST00000238379 TBC1D23Q9NUY8 699 aa13.89□□□□□ -0.19
HDHD3-201ENST00000238379 FKBP14Q9NWM8 211 aa13.89□□□□□ -0.19
HDHD3-201ENST00000238379 CLN6Q9NWW5 311 aa13.89□□□□□ -0.19
HDHD3-201ENST00000238379 SIGLEC7Q9Y286 467 aa13.89□□□□□ -0.19
HDHD3-201ENST00000238379 CUL9Q8IWT3 2517 aa13.89□□□□□ -0.19
HDHD3-201ENST00000238379 ZFHX2Q9C0A1 2572 aaPredicted RBP13.89□□□□□ -0.19
HDHD3-201ENST00000238379 IGKV1D-42A0A075B6H8 117 aa13.88□□□□□ -0.19
HDHD3-201ENST00000238379 SH3D21A4FU49 640 aa13.88□□□□□ -0.19
HDHD3-201ENST00000238379 ENO4A6NNW6 628 aa13.88□□□□□ -0.19
HDHD3-201ENST00000238379 CLCA1A8K7I4 914 aa13.88□□□□□ -0.19
HDHD3-201ENST00000238379 EFCAB9A8MZ26 197 aa13.88□□□□□ -0.19
HDHD3-201ENST00000238379 TERTO14746 1132 aaKnown RBP13.88□□□□□ -0.19
HDHD3-201ENST00000238379 PNMTP11086 282 aa13.88□□□□□ -0.19
HDHD3-201ENST00000238379 JUNBP17275 347 aaPredicted RBP13.88□□□□□ -0.19
HDHD3-201ENST00000238379 TMED10P49755 219 aaKnown RBP13.88□□□□□ -0.19
HDHD3-201ENST00000238379 P2RX1P51575 399 aa13.88□□□□□ -0.19
HDHD3-201ENST00000238379 RPS15P62841 145 aaKnown RBP13.88□□□□□ -0.19
HDHD3-201ENST00000238379 CRYZQ08257 329 aaKnown RBP13.88□□□□□ -0.19
HDHD3-201ENST00000238379 TOMM34Q15785 309 aaPredicted RBP13.88□□□□□ -0.19
HDHD3-201ENST00000238379 SLC30A6Q6NXT4 461 aa13.88□□□□□ -0.19
HDHD3-201ENST00000238379 AHSA2Q719I0 299 aa13.88□□□□□ -0.19
HDHD3-201ENST00000238379 MISPQ8IVT2 679 aa13.88□□□□□ -0.19
HDHD3-201ENST00000238379 FAM26EQ8N5C1 309 aa13.88□□□□□ -0.19
HDHD3-201ENST00000238379 SLC15A4Q8N697 577 aa13.88□□□□□ -0.19
HDHD3-201ENST00000238379 NLGN4YQ8NFZ3 816 aaPredicted RBP13.88□□□□□ -0.19
HDHD3-201ENST00000238379 OR13C2Q8NGS9 318 aa13.88□□□□□ -0.19
HDHD3-201ENST00000238379 ZNF563Q8TA94 476 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms