RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 SH3BGRL2Q9UJC5 107 aa10.15□□□□□ -0.78
TNFAIP3-201ENST00000237289 MCTS1Q9ULC4 181 aaKnown RBP10.15□□□□□ -0.78
TNFAIP3-201ENST00000237289 TMED7Q9Y3B3 224 aa10.15□□□□□ -0.78
TNFAIP3-201ENST00000237289 A0A1B0GWA3 101 aa10.15□□□□□ -0.78
TNFAIP3-201ENST00000237289 NGFRP08138 427 aa10.15□□□□□ -0.78
TNFAIP3-201ENST00000237289 EFNA3P52797 238 aa10.15□□□□□ -0.78
TNFAIP3-201ENST00000237289 ZNF791Q3KP31 576 aaPredicted RBP10.15□□□□□ -0.78
TNFAIP3-201ENST00000237289 CISD2Q8N5K1 135 aaKnown RBP10.15□□□□□ -0.78
TNFAIP3-201ENST00000237289 SCAIQ8N9R8 606 aa10.15□□□□□ -0.78
TNFAIP3-201ENST00000237289 OR5K1Q8NHB7 308 aa10.15□□□□□ -0.78
TNFAIP3-201ENST00000237289 TEX47Q8TBZ9 253 aa10.15□□□□□ -0.78
TNFAIP3-201ENST00000237289 CYGBQ8WWM9 190 aa10.15□□□□□ -0.78
TNFAIP3-201ENST00000237289 GTPBP3Q969Y2 492 aaKnown RBP10.15□□□□□ -0.78
TNFAIP3-201ENST00000237289 ANGPTL4Q9BY76 406 aa10.15□□□□□ -0.78
TNFAIP3-201ENST00000237289 ADNPQ9H2P0 1102 aa10.15□□□□□ -0.78
TNFAIP3-201ENST00000237289 NANSQ9NR45 359 aa10.15□□□□□ -0.78
TNFAIP3-201ENST00000237289 KRT84Q9NSB2 600 aa10.15□□□□□ -0.78
TNFAIP3-201ENST00000237289 TRGV5A0A0B4J1U4 118 aa10.15□□□□□ -0.78
TNFAIP3-201ENST00000237289 BLOC1S5-TXNDC5H3BN57 136 aa10.15□□□□□ -0.78
TNFAIP3-201ENST00000237289 SUSD5O60279 629 aa10.15□□□□□ -0.78
TNFAIP3-201ENST00000237289 ANPEPP15144 967 aa10.15□□□□□ -0.78
TNFAIP3-201ENST00000237289 TNFSF10P50591 281 aa10.15□□□□□ -0.78
TNFAIP3-201ENST00000237289 NFATC3Q12968 1075 aa10.15□□□□□ -0.78
TNFAIP3-201ENST00000237289 PMS2P3Q13401 168 aa10.15□□□□□ -0.78
TNFAIP3-201ENST00000237289 KLHL26Q53HC5 615 aa10.15□□□□□ -0.78
TNFAIP3-201ENST00000237289 ZNF468Q5VIY5 522 aaPredicted RBP10.15□□□□□ -0.78
TNFAIP3-201ENST00000237289 ZNF613Q6PF04 617 aa10.15□□□□□ -0.78
TNFAIP3-201ENST00000237289 C10orf111Q8N326 155 aa10.15□□□□□ -0.78
TNFAIP3-201ENST00000237289 SVOPLQ8N434 492 aa10.15□□□□□ -0.78
TNFAIP3-201ENST00000237289 SGTBQ96EQ0 304 aa10.15□□□□□ -0.78
TNFAIP3-201ENST00000237289 MRGPRX4Q96LA9 322 aa10.15□□□□□ -0.78
TNFAIP3-201ENST00000237289 RNF32Q9H0A6 362 aa10.15□□□□□ -0.78
TNFAIP3-201ENST00000237289 SLC25A18Q9H1K4 315 aa10.15□□□□□ -0.78
TNFAIP3-201ENST00000237289 EFCAB9A8MZ26 197 aa10.15□□□□□ -0.79
TNFAIP3-201ENST00000237289 ANXA8P13928 327 aa10.15□□□□□ -0.79
TNFAIP3-201ENST00000237289 FPR1P21462 350 aa10.15□□□□□ -0.79
TNFAIP3-201ENST00000237289 FKBP2P26885 142 aaKnown RBP10.15□□□□□ -0.79
TNFAIP3-201ENST00000237289 SRD5A2P31213 254 aa10.15□□□□□ -0.79
TNFAIP3-201ENST00000237289 ATP6V1E1P36543 226 aa10.15□□□□□ -0.79
TNFAIP3-201ENST00000237289 CD226Q15762 336 aa10.15□□□□□ -0.79
TNFAIP3-201ENST00000237289 WIPI1Q5MNZ9 446 aaPredicted RBP10.15□□□□□ -0.79
TNFAIP3-201ENST00000237289 GTF2IRD2BQ6EKJ0 949 aa10.15□□□□□ -0.79
TNFAIP3-201ENST00000237289 GPAT4Q86UL3 456 aa10.15□□□□□ -0.79
TNFAIP3-201ENST00000237289 GTF2IRD2Q86UP8 949 aa10.15□□□□□ -0.79
TNFAIP3-201ENST00000237289 SIGLEC12Q96PQ1 595 aa10.15□□□□□ -0.79
TNFAIP3-201ENST00000237289 PRR14Q9BWN1 585 aa10.15□□□□□ -0.79
TNFAIP3-201ENST00000237289 SAP130Q9H0E3 1048 aa10.15□□□□□ -0.79
TNFAIP3-201ENST00000237289 RIBC2Q9H4K1 309 aa10.15□□□□□ -0.79
TNFAIP3-201ENST00000237289 RERGLQ9H628 205 aa10.15□□□□□ -0.79
TNFAIP3-201ENST00000237289 FLRT3Q9NZU0 649 aa10.15□□□□□ -0.79
TNFAIP3-201ENST00000237289 FAAHO00519 579 aa10.14□□□□□ -0.79
TNFAIP3-201ENST00000237289 PRRG2O14669 202 aa10.14□□□□□ -0.79
TNFAIP3-201ENST00000237289 SNPHO15079 494 aa10.14□□□□□ -0.79
TNFAIP3-201ENST00000237289 SLC16A1P53985 500 aa10.14□□□□□ -0.79
TNFAIP3-201ENST00000237289 KLRB1Q12918 225 aa10.14□□□□□ -0.79
TNFAIP3-201ENST00000237289 CASP12Q6UXS9 341 aa10.14□□□□□ -0.79
TNFAIP3-201ENST00000237289 ZNF441Q8N8Z8 693 aa10.14□□□□□ -0.79
TNFAIP3-201ENST00000237289 SLC25A43Q8WUT9 341 aaPredicted RBP10.14□□□□□ -0.79
TNFAIP3-201ENST00000237289 TMEM239Q8WW34 195 aa10.14□□□□□ -0.79
TNFAIP3-201ENST00000237289 ARSGQ96EG1 525 aa10.14□□□□□ -0.79
TNFAIP3-201ENST00000237289 POLR2J2Q9GZM3 115 aaKnown RBP10.14□□□□□ -0.79
TNFAIP3-201ENST00000237289 POLR2J3Q9H1A7 115 aaKnown RBP10.14□□□□□ -0.79
TNFAIP3-201ENST00000237289 NMNAT1Q9HAN9 279 aaPredicted RBP10.14□□□□□ -0.79
TNFAIP3-201ENST00000237289 MED17Q9NVC6 651 aa10.14□□□□□ -0.79
TNFAIP3-201ENST00000237289 PCBP3P57721 371 aaKnown RBP10.14□□□□□ -0.79
TNFAIP3-201ENST00000237289 CCNIQ14094 377 aa10.14□□□□□ -0.79
TNFAIP3-201ENST00000237289 KRT80Q6KB66 452 aa10.14□□□□□ -0.79
TNFAIP3-201ENST00000237289 C3orf33Q6P1S2 294 aa10.14□□□□□ -0.79
TNFAIP3-201ENST00000237289 CBLN3Q6UW01 205 aa10.14□□□□□ -0.79
TNFAIP3-201ENST00000237289 GFRALQ6UXV0 394 aa10.14□□□□□ -0.79
TNFAIP3-201ENST00000237289 MAMDC2Q7Z304 686 aaPredicted RBP10.14□□□□□ -0.79
TNFAIP3-201ENST00000237289 ADGRG5Q8IZF4 528 aa10.14□□□□□ -0.79
TNFAIP3-201ENST00000237289 FAM109AQ8N4B1 249 aa10.14□□□□□ -0.79
TNFAIP3-201ENST00000237289 AMER2Q8N7J2 671 aa10.14□□□□□ -0.79
TNFAIP3-201ENST00000237289 HES7Q9BYE0 225 aa10.14□□□□□ -0.79
TNFAIP3-201ENST00000237289 TRIM4Q9C037 500 aa10.14□□□□□ -0.79
TNFAIP3-201ENST00000237289 CXorf56Q9H5V9 222 aa10.14□□□□□ -0.79
TNFAIP3-201ENST00000237289 NPIPA2E9PIF3 369 aa10.14□□□□□ -0.79
TNFAIP3-201ENST00000237289 NPIPA3F8WFD2 350 aa10.14□□□□□ -0.79
TNFAIP3-201ENST00000237289 LINC01387J3KSC0 135 aa10.14□□□□□ -0.79
TNFAIP3-201ENST00000237289 XKRYO14609 159 aa10.14□□□□□ -0.79
TNFAIP3-201ENST00000237289 TERTO14746 1132 aaKnown RBP10.14□□□□□ -0.79
TNFAIP3-201ENST00000237289 AKAP8O43823 692 aaKnown RBP10.14□□□□□ -0.79
TNFAIP3-201ENST00000237289 IDUAP35475 653 aa10.14□□□□□ -0.79
TNFAIP3-201ENST00000237289 C8orf82Q6P1X6 216 aaPredicted RBP10.14□□□□□ -0.79
TNFAIP3-201ENST00000237289 C5orf46Q6UWT4 87 aa10.14□□□□□ -0.79
TNFAIP3-201ENST00000237289 EXD3Q8N9H8 876 aa10.14□□□□□ -0.79
TNFAIP3-201ENST00000237289 ABTB1Q969K4 478 aaPredicted RBP10.14□□□□□ -0.79
TNFAIP3-201ENST00000237289 TMEM41AQ96HV5 264 aa10.14□□□□□ -0.79
TNFAIP3-201ENST00000237289 RNPEPL1Q9HAU8 725 aa10.14□□□□□ -0.79
TNFAIP3-201ENST00000237289 CHRNA9Q9UGM1 479 aa10.14□□□□□ -0.79
TNFAIP3-201ENST00000237289 A0A087WV48 116 aa10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 ZNF726A6NNF4 738 aa10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 ACOT8O14734 319 aa10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 NADKO95544 446 aaPredicted RBP10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 CH25HO95992 272 aa10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 GSTM3P21266 225 aa10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 CTBP2P56545 445 aa10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 EXOC3L2Q2M3D2 409 aa10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 AP1ARQ63HQ0 302 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms