RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 OSMP13725 252 aa16.95■□□□□ 0.3
SNX17-201ENST00000233575 ELK4P28324 431 aa16.95■□□□□ 0.3
SNX17-201ENST00000233575 ISL1P61371 349 aa16.95■□□□□ 0.3
SNX17-201ENST00000233575 ALDH6A1Q02252 535 aaKnown RBP16.95■□□□□ 0.3
SNX17-201ENST00000233575 PTGES3Q15185 160 aaKnown RBP16.95■□□□□ 0.3
SNX17-201ENST00000233575 COL28A1Q2UY09 1125 aa16.95■□□□□ 0.3
SNX17-201ENST00000233575 CTU2Q2VPK5 515 aaKnown RBP16.95■□□□□ 0.3
SNX17-201ENST00000233575 DCAF10Q5QP82 559 aa16.95■□□□□ 0.3
SNX17-201ENST00000233575 WBP2NLQ6ICG8 309 aa16.95■□□□□ 0.3
SNX17-201ENST00000233575 KIF18BQ86Y91 864 aa16.95■□□□□ 0.3
SNX17-201ENST00000233575 C8orf59Q8N0T1 100 aaPredicted RBP16.95■□□□□ 0.3
SNX17-201ENST00000233575 OR5W2Q8NH69 310 aa16.95■□□□□ 0.3
SNX17-201ENST00000233575 ZNF563Q8TA94 476 aa16.95■□□□□ 0.3
SNX17-201ENST00000233575 KIAA1143Q96AT1 154 aaPredicted RBP16.95■□□□□ 0.3
SNX17-201ENST00000233575 THOC3Q96J01 351 aaKnown RBP16.95■□□□□ 0.3
SNX17-201ENST00000233575 HRASLS5Q96KN8 279 aa16.95■□□□□ 0.3
SNX17-201ENST00000233575 PITX2Q99697 317 aa16.95■□□□□ 0.3
SNX17-201ENST00000233575 METTL7AQ9H8H3 244 aa16.95■□□□□ 0.3
SNX17-201ENST00000233575 PNPLA3Q9NST1 481 aa16.95■□□□□ 0.3
SNX17-201ENST00000233575 KLF4O43474 513 aa16.94■□□□□ 0.3
SNX17-201ENST00000233575 MAKP20794 623 aa16.94■□□□□ 0.3
SNX17-201ENST00000233575 P2RX1P51575 399 aa16.94■□□□□ 0.3
SNX17-201ENST00000233575 CRISP1P54107 249 aa16.94■□□□□ 0.3
SNX17-201ENST00000233575 TPD52P55327 224 aaPredicted RBP16.94■□□□□ 0.3
SNX17-201ENST00000233575 CD47Q08722 323 aa16.94■□□□□ 0.3
SNX17-201ENST00000233575 KEAP1Q14145 624 aa16.94■□□□□ 0.3
SNX17-201ENST00000233575 RTP5Q14D33 572 aa16.94■□□□□ 0.3
SNX17-201ENST00000233575 PRAMEF20Q5VT98 475 aa16.94■□□□□ 0.3
SNX17-201ENST00000233575 H3F3CQ6NXT2 135 aa16.94■□□□□ 0.3
SNX17-201ENST00000233575 OPN5Q6U736 354 aa16.94■□□□□ 0.3
SNX17-201ENST00000233575 B4GALNT2Q8NHY0 566 aa16.94■□□□□ 0.3
SNX17-201ENST00000233575 GNPDA2Q8TDQ7 276 aa16.94■□□□□ 0.3
SNX17-201ENST00000233575 PLA2G12AQ9BZM1 189 aa16.94■□□□□ 0.3
SNX17-201ENST00000233575 EGLN3Q9H6Z9 239 aa16.94■□□□□ 0.3
SNX17-201ENST00000233575 MED13Q9UHV7 2174 aa16.94■□□□□ 0.3
SNX17-201ENST00000233575 CFAP47Q6ZTR5 3102 aa16.94■□□□□ 0.3
SNX17-201ENST00000233575 CPAMD8Q8IZJ3 1885 aa16.94■□□□□ 0.3
SNX17-201ENST00000233575 H3BN98 237 aa16.94■□□□□ 0.3
SNX17-201ENST00000233575 M0R129 80 aa16.94■□□□□ 0.3
SNX17-201ENST00000233575 IFI30P13284 250 aa16.94■□□□□ 0.3
SNX17-201ENST00000233575 IFNGR2P38484 337 aa16.94■□□□□ 0.3
SNX17-201ENST00000233575 CASP3P42574 277 aa16.94■□□□□ 0.3
SNX17-201ENST00000233575 GTF2A1P52655 376 aaPredicted RBP16.94■□□□□ 0.3
SNX17-201ENST00000233575 TSPAN31Q12999 210 aa16.94■□□□□ 0.3
SNX17-201ENST00000233575 MEP1AQ16819 746 aa16.94■□□□□ 0.3
SNX17-201ENST00000233575 CD300LDQ6UXZ3 194 aa16.94■□□□□ 0.3
SNX17-201ENST00000233575 THAP5Q7Z6K1 395 aa16.94■□□□□ 0.3
SNX17-201ENST00000233575 ZNF786Q8N393 782 aa16.94■□□□□ 0.3
SNX17-201ENST00000233575 TMEM156Q8N614 296 aa16.94■□□□□ 0.3
SNX17-201ENST00000233575 DNAJA4Q8WW22 397 aaPredicted RBP16.94■□□□□ 0.3
SNX17-201ENST00000233575 MPP4Q96JB8 637 aa16.94■□□□□ 0.3
SNX17-201ENST00000233575 DPH1Q9BZG8 443 aa16.94■□□□□ 0.3
SNX17-201ENST00000233575 MED11Q9P086 117 aa16.94■□□□□ 0.3
SNX17-201ENST00000233575 KLK13Q9UKR3 277 aa16.94■□□□□ 0.3
SNX17-201ENST00000233575 LOC400499M0QZD8 3231 aa16.93■□□□□ 0.3
SNX17-201ENST00000233575 A0A087WUJ7 227 aa16.93■□□□□ 0.3
SNX17-201ENST00000233575 TRABD2BA6NFA1 517 aa16.93■□□□□ 0.3
SNX17-201ENST00000233575 CDC40O60508 579 aaKnown RBP eCLIP16.93■□□□□ 0.3
SNX17-201ENST00000233575 WT1P19544 449 aaPredicted RBP16.93■□□□□ 0.3
SNX17-201ENST00000233575 SPINK2P20155 84 aa16.93■□□□□ 0.3
SNX17-201ENST00000233575 SLC6A8P48029 635 aa16.93■□□□□ 0.3
SNX17-201ENST00000233575 IL5RAQ01344 420 aa16.93■□□□□ 0.3
SNX17-201ENST00000233575 C17orf67Q0P5P2 114 aa16.93■□□□□ 0.3
SNX17-201ENST00000233575 LAIR2Q6ISS4 152 aa16.93■□□□□ 0.3
SNX17-201ENST00000233575 ATG4DQ86TL0 474 aaPredicted RBP16.93■□□□□ 0.3
SNX17-201ENST00000233575 GPR119Q8TDV5 335 aa16.93■□□□□ 0.3
SNX17-201ENST00000233575 NPAS1Q99742 590 aa16.93■□□□□ 0.3
SNX17-201ENST00000233575 MED31Q9Y3C7 131 aa16.93■□□□□ 0.3
SNX17-201ENST00000233575 MPDZO75970 2070 aa16.93■□□□□ 0.3
SNX17-201ENST00000233575 MAGEA13PA6NCF6 341 aa16.92■□□□□ 0.3
SNX17-201ENST00000233575 SMNDC1O75940 238 aaKnown RBP eCLIP16.92■□□□□ 0.33e-6■■■■□ 26.7
SNX17-201ENST00000233575 SLC34A2O95436 690 aa16.92■□□□□ 0.3
SNX17-201ENST00000233575 CCL3P10147 92 aa16.92■□□□□ 0.3
SNX17-201ENST00000233575 FPR3P25089 353 aa16.92■□□□□ 0.3
SNX17-201ENST00000233575 TACR3P29371 465 aa16.92■□□□□ 0.3
SNX17-201ENST00000233575 SLC1A3P43003 542 aa16.92■□□□□ 0.3
SNX17-201ENST00000233575 ESRRGP62508 458 aa16.92■□□□□ 0.3
SNX17-201ENST00000233575 PRKCDQ05655 676 aa16.92■□□□□ 0.3
SNX17-201ENST00000233575 CBFBQ13951 182 aa16.92■□□□□ 0.3
SNX17-201ENST00000233575 ACER2Q5QJU3 275 aa16.92■□□□□ 0.3
SNX17-201ENST00000233575 MISPQ8IVT2 679 aa16.92■□□□□ 0.3
SNX17-201ENST00000233575 RNF113BQ8IZP6 322 aaKnown RBP16.92■□□□□ 0.3
SNX17-201ENST00000233575 IQCF1Q8N6M8 205 aa16.92■□□□□ 0.3
SNX17-201ENST00000233575 CNIH3Q8TBE1 160 aa16.92■□□□□ 0.3
SNX17-201ENST00000233575 SELENONQ9NZV5 590 aa16.92■□□□□ 0.3
SNX17-201ENST00000233575 WIF1Q9Y5W5 379 aa16.92■□□□□ 0.3
SNX17-201ENST00000233575 IGKV1D-42A0A075B6H8 117 aa16.92■□□□□ 0.3
SNX17-201ENST00000233575 ZAR1LA6NP61 321 aa16.92■□□□□ 0.3
SNX17-201ENST00000233575 F10P00742 488 aa16.92■□□□□ 0.3
SNX17-201ENST00000233575 ENDOUP21128 410 aaKnown RBP16.92■□□□□ 0.3
SNX17-201ENST00000233575 GGT2P36268 569 aa16.92■□□□□ 0.3
SNX17-201ENST00000233575 COX10Q12887 443 aa16.92■□□□□ 0.3
SNX17-201ENST00000233575 IL18R1Q13478 541 aa16.92■□□□□ 0.3
SNX17-201ENST00000233575 QPRTQ15274 297 aa16.92■□□□□ 0.3
SNX17-201ENST00000233575 TTC33Q6PID6 262 aaPredicted RBP16.92■□□□□ 0.3
SNX17-201ENST00000233575 POMZP3Q6PJE2 187 aa16.92■□□□□ 0.3
SNX17-201ENST00000233575 MDGA2Q7Z553 956 aa16.92■□□□□ 0.3
SNX17-201ENST00000233575 OR8D4Q8NGM9 314 aa16.92■□□□□ 0.3
SNX17-201ENST00000233575 FAM81AQ8TBF8 368 aa16.92■□□□□ 0.3
SNX17-201ENST00000233575 BPIFA2Q96DR5 249 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms