RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 CSNK2A1P68400 391 aaPredicted RBP12.94□□□□□ -0.34
HCFC2-201ENST00000229330 SLC14A2Q15849 920 aa12.94□□□□□ -0.34
HCFC2-201ENST00000229330 SLC6A19Q695T7 634 aa12.94□□□□□ -0.34
HCFC2-201ENST00000229330 AWAT2Q6E213 333 aa12.94□□□□□ -0.34
HCFC2-201ENST00000229330 ZFP82Q8N141 532 aa12.94□□□□□ -0.34
HCFC2-201ENST00000229330 MFSD4AQ8N468 514 aa12.94□□□□□ -0.34
HCFC2-201ENST00000229330 CSNK2A3Q8NEV1 391 aa12.94□□□□□ -0.34
HCFC2-201ENST00000229330 PRRG4Q9BZD6 226 aa12.94□□□□□ -0.34
HCFC2-201ENST00000229330 SRRQ9GZT4 340 aa12.94□□□□□ -0.34
HCFC2-201ENST00000229330 RPH3AQ9Y2J0 694 aaPredicted RBP12.94□□□□□ -0.34
HCFC2-201ENST00000229330 NHSL1Q5SYE7 1610 aa12.94□□□□□ -0.34
HCFC2-201ENST00000229330 TUBAL3A6NHL2 446 aa12.94□□□□□ -0.34
HCFC2-201ENST00000229330 MECP2P51608 486 aaKnown RBP12.94□□□□□ -0.34
HCFC2-201ENST00000229330 DUSP7Q16829 419 aa12.94□□□□□ -0.34
HCFC2-201ENST00000229330 KLHL15Q96M94 604 aa12.94□□□□□ -0.34
HCFC2-201ENST00000229330 OR2M4Q96R27 311 aa12.94□□□□□ -0.34
HCFC2-201ENST00000229330 CNTNAP3Q9BZ76 1288 aa12.94□□□□□ -0.34
HCFC2-201ENST00000229330 SEMA4GQ9NTN9 838 aa12.94□□□□□ -0.34
HCFC2-201ENST00000229330 NME7Q9Y5B8 376 aa12.94□□□□□ -0.34
HCFC2-201ENST00000229330 A0A0B4J2A0 478 aa12.94□□□□□ -0.34
HCFC2-201ENST00000229330 FAM227AF5H4B4 570 aa12.94□□□□□ -0.34
HCFC2-201ENST00000229330 FXYD1O00168 92 aa12.94□□□□□ -0.34
HCFC2-201ENST00000229330 GPRIN2O60269 458 aa12.94□□□□□ -0.34
HCFC2-201ENST00000229330 TPOP07202 933 aa12.94□□□□□ -0.34
HCFC2-201ENST00000229330 SLC26A5P58743 744 aa12.94□□□□□ -0.34
HCFC2-201ENST00000229330 CTXN1P60606 82 aa12.94□□□□□ -0.34
HCFC2-201ENST00000229330 TMEM207Q6UWW9 146 aa12.94□□□□□ -0.34
HCFC2-201ENST00000229330 CCDC190Q86UF4 302 aa12.94□□□□□ -0.34
HCFC2-201ENST00000229330 CD163Q86VB7 1156 aa12.94□□□□□ -0.34
HCFC2-201ENST00000229330 OR4Q3Q8NH05 313 aa12.94□□□□□ -0.34
HCFC2-201ENST00000229330 MALSU1Q96EH3 234 aa12.94□□□□□ -0.34
HCFC2-201ENST00000229330 TCEAL2Q9H3H9 227 aaPredicted RBP12.94□□□□□ -0.34
HCFC2-201ENST00000229330 PELI2Q9HAT8 420 aa12.94□□□□□ -0.34
HCFC2-201ENST00000229330 LUZP4Q9P127 313 aa12.94□□□□□ -0.34
HCFC2-201ENST00000229330 SHPKQ9UHJ6 478 aa12.94□□□□□ -0.34
HCFC2-201ENST00000229330 HMGN2P05204 90 aaKnown RBP12.93□□□□□ -0.34
HCFC2-201ENST00000229330 SEC61A1P61619 476 aaKnown RBP12.93□□□□□ -0.34
HCFC2-201ENST00000229330 HOXC5Q00444 222 aa12.93□□□□□ -0.34
HCFC2-201ENST00000229330 SYPL1Q16563 259 aa12.93□□□□□ -0.34
HCFC2-201ENST00000229330 TEX261Q6UWH6 196 aa12.93□□□□□ -0.34
HCFC2-201ENST00000229330 GRASPQ7Z6J2 395 aaPredicted RBP12.93□□□□□ -0.34
HCFC2-201ENST00000229330 KLHDC8AQ8IYD2 350 aa12.93□□□□□ -0.34
HCFC2-201ENST00000229330 C2CD4CQ8TF44 421 aa12.93□□□□□ -0.34
HCFC2-201ENST00000229330 SORBS1Q9BX66 1292 aaKnown RBP12.93□□□□□ -0.34
HCFC2-201ENST00000229330 SMG9Q9H0W8 520 aaKnown RBP12.93□□□□□ -0.34
HCFC2-201ENST00000229330 KIF25Q9UIL4 384 aa12.93□□□□□ -0.34
HCFC2-201ENST00000229330 BACE2Q9Y5Z0 518 aa12.93□□□□□ -0.34
HCFC2-201ENST00000229330 U3KQ87 197 aa12.93□□□□□ -0.34
HCFC2-201ENST00000229330 ELK1P19419 428 aa12.93□□□□□ -0.34
HCFC2-201ENST00000229330 ELAVL4P26378 380 aaKnown RBP12.93□□□□□ -0.34
HCFC2-201ENST00000229330 AOAHP28039 575 aa12.93□□□□□ -0.34
HCFC2-201ENST00000229330 PDZK1IP1Q13113 114 aa12.93□□□□□ -0.34
HCFC2-201ENST00000229330 H3F3CQ6NXT2 135 aa12.93□□□□□ -0.34
HCFC2-201ENST00000229330 PRSS42Q7Z5A4 293 aa12.93□□□□□ -0.34
HCFC2-201ENST00000229330 BPIFA2Q96DR5 249 aa12.93□□□□□ -0.34
HCFC2-201ENST00000229330 COL16A1Q07092 1604 aaPredicted RBP12.93□□□□□ -0.34
HCFC2-201ENST00000229330 FAM230AA0A1W2PPH8 454 aa12.93□□□□□ -0.34
HCFC2-201ENST00000229330 DRGXA6NNA5 263 aa12.93□□□□□ -0.34
HCFC2-201ENST00000229330 ZNF16P17020 682 aaPredicted RBP12.93□□□□□ -0.34
HCFC2-201ENST00000229330 HSD11B2P80365 405 aa12.93□□□□□ -0.34
HCFC2-201ENST00000229330 DEFB134Q4QY38 66 aa12.93□□□□□ -0.34
HCFC2-201ENST00000229330 C2orf27AQ580R0 203 aa12.93□□□□□ -0.34
HCFC2-201ENST00000229330 ENTPD8Q5MY95 495 aa12.93□□□□□ -0.34
HCFC2-201ENST00000229330 UNQ6126/PRO20091Q6UXV3 157 aa12.93□□□□□ -0.34
HCFC2-201ENST00000229330 SGPP2Q8IWX5 399 aa12.93□□□□□ -0.34
HCFC2-201ENST00000229330 LSMEM1Q8N8F7 131 aa12.93□□□□□ -0.34
HCFC2-201ENST00000229330 FNDC9Q8TBE3 224 aa12.93□□□□□ -0.34
HCFC2-201ENST00000229330 GHSRQ92847 366 aa12.93□□□□□ -0.34
HCFC2-201ENST00000229330 SMIM3Q9BZL3 60 aa12.93□□□□□ -0.34
HCFC2-201ENST00000229330 NRIP3Q9NQ35 241 aa12.93□□□□□ -0.34
HCFC2-201ENST00000229330 UFSP2Q9NUQ7 469 aa12.93□□□□□ -0.34
HCFC2-201ENST00000229330 UBE2J1Q9Y385 318 aaPredicted RBP12.93□□□□□ -0.34
HCFC2-201ENST00000229330 A0A1W2PS29 197 aa12.93□□□□□ -0.34
HCFC2-201ENST00000229330 ANTXRLA6NF34 631 aa12.93□□□□□ -0.34
HCFC2-201ENST00000229330 FBXO24O75426 580 aa12.93□□□□□ -0.34
HCFC2-201ENST00000229330 CDC123O75794 336 aaPredicted RBP12.93□□□□□ -0.34
HCFC2-201ENST00000229330 LRIF1Q5T3J3 769 aa12.93□□□□□ -0.34
HCFC2-201ENST00000229330 OR52N1Q8NH53 320 aa12.93□□□□□ -0.34
HCFC2-201ENST00000229330 CREB3L4Q8TEY5 395 aa12.93□□□□□ -0.34
HCFC2-201ENST00000229330 SEC22AQ96IW7 307 aa12.93□□□□□ -0.34
HCFC2-201ENST00000229330 ASIC5Q9NY37 505 aa12.93□□□□□ -0.34
HCFC2-201ENST00000229330 PPP4R1LQ9P1A2 415 aa12.93□□□□□ -0.34
HCFC2-201ENST00000229330 LEFTY2O00292 366 aa12.93□□□□□ -0.34
HCFC2-201ENST00000229330 VEGFDO43915 354 aa12.93□□□□□ -0.34
HCFC2-201ENST00000229330 CCR7P32248 378 aa12.93□□□□□ -0.34
HCFC2-201ENST00000229330 PRPS1P60891 318 aa12.93□□□□□ -0.34
HCFC2-201ENST00000229330 TNFRSF17Q02223 184 aa12.93□□□□□ -0.34
HCFC2-201ENST00000229330 TMEM179BQ7Z7N9 219 aa12.93□□□□□ -0.34
HCFC2-201ENST00000229330 UBTD2Q8WUN7 234 aa12.93□□□□□ -0.34
HCFC2-201ENST00000229330 MS4A4EQ96PG1 132 aa12.93□□□□□ -0.34
HCFC2-201ENST00000229330 SYT3Q9BQG1 590 aa12.93□□□□□ -0.34
HCFC2-201ENST00000229330 NARFLQ9H6Q4 476 aa12.93□□□□□ -0.34
HCFC2-201ENST00000229330 USP36Q9P275 1121 aaKnown RBP12.93□□□□□ -0.34
HCFC2-201ENST00000229330 ZNF281Q9Y2X9 895 aa12.93□□□□□ -0.34
HCFC2-201ENST00000229330 MBLAC1A4D2B0 266 aaPredicted RBP12.92□□□□□ -0.34
HCFC2-201ENST00000229330 ATP1B1P05026 303 aa12.92□□□□□ -0.34
HCFC2-201ENST00000229330 CBR1P16152 277 aa12.92□□□□□ -0.34
HCFC2-201ENST00000229330 CR2P20023 1033 aa12.92□□□□□ -0.34
HCFC2-201ENST00000229330 OR6M1Q8NGM8 313 aa12.92□□□□□ -0.34
HCFC2-201ENST00000229330 DOK4Q8TEW6 326 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms