RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 NTN1O95631 604 aa12.82□□□□□ -0.36
NFKB1-201ENST00000226574 ITGA5P08648 1049 aa12.82□□□□□ -0.36
NFKB1-201ENST00000226574 UBE2MP61081 183 aaKnown RBP12.82□□□□□ -0.36
NFKB1-201ENST00000226574 GALK2Q01415 458 aa12.82□□□□□ -0.36
NFKB1-201ENST00000226574 ALG11Q2TAA5 492 aa12.82□□□□□ -0.36
NFKB1-201ENST00000226574 SLC35D2Q76EJ3 337 aa12.82□□□□□ -0.36
NFKB1-201ENST00000226574 CD163Q86VB7 1156 aa12.82□□□□□ -0.36
NFKB1-201ENST00000226574 NLRP8Q86W28 1048 aa12.82□□□□□ -0.36
NFKB1-201ENST00000226574 TMEM99Q8N816 258 aa12.82□□□□□ -0.36
NFKB1-201ENST00000226574 MFFQ9GZY8 342 aa12.82□□□□□ -0.36
NFKB1-201ENST00000226574 METTL21EPA6NDL7 271 aa12.82□□□□□ -0.36
NFKB1-201ENST00000226574 SSX1Q16384 188 aa12.82□□□□□ -0.36
NFKB1-201ENST00000226574 HENMT1Q5T8I9 393 aaKnown RBP12.82□□□□□ -0.36
NFKB1-201ENST00000226574 YOD1Q5VVQ6 348 aaPredicted RBP12.82□□□□□ -0.36
NFKB1-201ENST00000226574 TMEM64Q6YI46 380 aa12.82□□□□□ -0.36
NFKB1-201ENST00000226574 SHISA6Q6ZSJ9 500 aa12.82□□□□□ -0.36
NFKB1-201ENST00000226574 CCDC71Q8IV32 467 aaPredicted RBP12.82□□□□□ -0.36
NFKB1-201ENST00000226574 SIMC1Q8NDZ2 872 aa12.82□□□□□ -0.36
NFKB1-201ENST00000226574 APH1BQ8WW43 257 aa12.82□□□□□ -0.36
NFKB1-201ENST00000226574 OR2A14Q96R47 310 aa12.82□□□□□ -0.36
NFKB1-201ENST00000226574 NMNAT3Q96T66 252 aa12.82□□□□□ -0.36
NFKB1-201ENST00000226574 ACTR6Q9GZN1 396 aa12.82□□□□□ -0.36
NFKB1-201ENST00000226574 PIGUQ9H490 435 aa12.82□□□□□ -0.36
NFKB1-201ENST00000226574 A3GALT2U3KPV4 340 aa12.82□□□□□ -0.36
NFKB1-201ENST00000226574 SSC5DA1L4H1 1573 aa12.82□□□□□ -0.36
NFKB1-201ENST00000226574 TMEM72A0PK05 275 aa12.82□□□□□ -0.36
NFKB1-201ENST00000226574 VNN2O95498 520 aa12.82□□□□□ -0.36
NFKB1-201ENST00000226574 KLF8O95600 359 aaPredicted RBP12.82□□□□□ -0.36
NFKB1-201ENST00000226574 ZNF20P17024 532 aa12.82□□□□□ -0.36
NFKB1-201ENST00000226574 HAGHLQ6PII5 290 aaPredicted RBP12.82□□□□□ -0.36
NFKB1-201ENST00000226574 C3P1Q6ZMU1 363 aa12.82□□□□□ -0.36
NFKB1-201ENST00000226574 PDZD9Q8IXQ8 264 aa12.82□□□□□ -0.36
NFKB1-201ENST00000226574 PFN4Q8NHR9 129 aa12.82□□□□□ -0.36
NFKB1-201ENST00000226574 UCN3Q969E3 161 aa12.82□□□□□ -0.36
NFKB1-201ENST00000226574 MNTQ99583 582 aa12.82□□□□□ -0.36
NFKB1-201ENST00000226574 QPCTLQ9NXS2 382 aa12.82□□□□□ -0.36
NFKB1-201ENST00000226574 AP1M2Q9Y6Q5 423 aa12.82□□□□□ -0.36
NFKB1-201ENST00000226574 GPR89AB7ZAQ6 455 aa12.81□□□□□ -0.36
NFKB1-201ENST00000226574 ABLIM3O94929 683 aa12.81□□□□□ -0.36
NFKB1-201ENST00000226574 HCKP08631 526 aa12.81□□□□□ -0.36
NFKB1-201ENST00000226574 GPR89BP0CG08 455 aa12.81□□□□□ -0.36
NFKB1-201ENST00000226574 ITGB7P26010 798 aa12.81□□□□□ -0.36
NFKB1-201ENST00000226574 DCST2Q5T1A1 773 aa12.81□□□□□ -0.36
NFKB1-201ENST00000226574 ASTLQ6HA08 431 aaPredicted RBP12.81□□□□□ -0.36
NFKB1-201ENST00000226574 ZNF550Q7Z398 422 aa12.81□□□□□ -0.36
NFKB1-201ENST00000226574 SLC35F2Q8IXU6 374 aa12.81□□□□□ -0.36
NFKB1-201ENST00000226574 OR5AK2Q8NH90 309 aa12.81□□□□□ -0.36
NFKB1-201ENST00000226574 DDOQ99489 341 aa12.81□□□□□ -0.36
NFKB1-201ENST00000226574 SRRQ9GZT4 340 aa12.81□□□□□ -0.36
NFKB1-201ENST00000226574 ISG20L2Q9H9L3 353 aaKnown RBP12.81□□□□□ -0.36
NFKB1-201ENST00000226574 FBXL21Q9UKT6 434 aa12.81□□□□□ -0.36
NFKB1-201ENST00000226574 FLVCR2Q9UPI3 526 aa12.81□□□□□ -0.36
NFKB1-201ENST00000226574 SHANK3Q9BYB0 1731 aa12.81□□□□□ -0.36
NFKB1-201ENST00000226574 PDGFAP04085 211 aa12.81□□□□□ -0.36
NFKB1-201ENST00000226574 DDOSTP39656 456 aa12.81□□□□□ -0.36
NFKB1-201ENST00000226574 PBX2P40425 430 aa12.81□□□□□ -0.36
NFKB1-201ENST00000226574 RUNX3Q13761 415 aa12.81□□□□□ -0.36
NFKB1-201ENST00000226574 GALEQ14376 348 aa12.81□□□□□ -0.36
NFKB1-201ENST00000226574 TRMT12Q53H54 448 aaKnown RBP12.81□□□□□ -0.36
NFKB1-201ENST00000226574 LSRQ86X29 649 aaPredicted RBP12.81□□□□□ -0.36
NFKB1-201ENST00000226574 AMER3Q8N944 861 aa12.81□□□□□ -0.36
NFKB1-201ENST00000226574 OR6F1Q8NGZ6 308 aa12.81□□□□□ -0.36
NFKB1-201ENST00000226574 CNOT9Q92600 299 aaKnown RBP12.81□□□□□ -0.36
NFKB1-201ENST00000226574 NXPE3Q969Y0 559 aa12.81□□□□□ -0.36
NFKB1-201ENST00000226574 PITX2Q99697 317 aa12.81□□□□□ -0.36
NFKB1-201ENST00000226574 PELI2Q9HAT8 420 aa12.81□□□□□ -0.36
NFKB1-201ENST00000226574 ACSS1Q9NUB1 689 aaPredicted RBP12.81□□□□□ -0.36
NFKB1-201ENST00000226574 M0R036 132 aa12.81□□□□□ -0.36
NFKB1-201ENST00000226574 ALX3O95076 343 aa12.81□□□□□ -0.36
NFKB1-201ENST00000226574 FARS2O95363 451 aaKnown RBP12.81□□□□□ -0.36
NFKB1-201ENST00000226574 CHRM4P08173 479 aa12.81□□□□□ -0.36
NFKB1-201ENST00000226574 MAPK3P27361 379 aaPredicted RBP12.81□□□□□ -0.36
NFKB1-201ENST00000226574 LSSP48449 732 aa12.81□□□□□ -0.36
NFKB1-201ENST00000226574 CSNK1G2P78368 415 aa12.81□□□□□ -0.36
NFKB1-201ENST00000226574 DGCR2P98153 550 aa12.81□□□□□ -0.36
NFKB1-201ENST00000226574 LAIR1Q6GTX8 287 aa12.81□□□□□ -0.36
NFKB1-201ENST00000226574 SLC39A5Q6ZMH5 540 aa12.81□□□□□ -0.36
NFKB1-201ENST00000226574 GDF7Q7Z4P5 450 aa12.81□□□□□ -0.36
NFKB1-201ENST00000226574 VN1R2Q8NFZ6 395 aa12.81□□□□□ -0.36
NFKB1-201ENST00000226574 DUSP19Q8WTR2 217 aa12.81□□□□□ -0.36
NFKB1-201ENST00000226574 SMARCD2Q92925 531 aa12.81□□□□□ -0.36
NFKB1-201ENST00000226574 ZDHHC5Q9C0B5 715 aa12.81□□□□□ -0.36
NFKB1-201ENST00000226574 ZNF443Q9Y2A4 671 aaPredicted RBP12.81□□□□□ -0.36
NFKB1-201ENST00000226574 NUBP2Q9Y5Y2 271 aa12.81□□□□□ -0.36
NFKB1-201ENST00000226574 KCNE3Q9Y6H6 103 aa12.81□□□□□ -0.36
NFKB1-201ENST00000226574 ASXL3Q9C0F0 2248 aa12.81□□□□□ -0.36
NFKB1-201ENST00000226574 TRBV5-4A0A0C4DH59 114 aa12.8□□□□□ -0.36
NFKB1-201ENST00000226574 A0A1W2PR48 441 aa12.8□□□□□ -0.36
NFKB1-201ENST00000226574 PEX12O00623 359 aa12.8□□□□□ -0.36
NFKB1-201ENST00000226574 AHSA1O95433 338 aa12.8□□□□□ -0.36
NFKB1-201ENST00000226574 RLN2P04090 185 aa12.8□□□□□ -0.36
NFKB1-201ENST00000226574 CLUP10909 449 aa12.8□□□□□ -0.36
NFKB1-201ENST00000226574 PTHLHP12272 177 aa12.8□□□□□ -0.36
NFKB1-201ENST00000226574 CPMP14384 443 aa12.8□□□□□ -0.36
NFKB1-201ENST00000226574 S1PR1P21453 382 aa12.8□□□□□ -0.36
NFKB1-201ENST00000226574 MLLT3P42568 568 aaPredicted RBP12.8□□□□□ -0.36
NFKB1-201ENST00000226574 LINC00299Q6ZSB3 139 aa12.8□□□□□ -0.36
NFKB1-201ENST00000226574 NDUFAF7Q7L592 441 aa12.8□□□□□ -0.36
NFKB1-201ENST00000226574 ZNF584Q8IVC4 421 aa12.8□□□□□ -0.36
NFKB1-201ENST00000226574 OR5K2Q8NHB8 316 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms