RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 GRHL3Q8TE85 626 aa20.28■□□□□ 0.84
SMARCD2-201ENST00000225742 KCNJ15Q99712 375 aa20.28■□□□□ 0.84
SMARCD2-201ENST00000225742 TTYH2Q9BSA4 534 aa20.28■□□□□ 0.84
SMARCD2-201ENST00000225742 OR51V1Q9H2C8 321 aa20.28■□□□□ 0.84
SMARCD2-201ENST00000225742 KLHL21Q9UJP4 597 aa20.28■□□□□ 0.84
SMARCD2-201ENST00000225742 MRPS33Q9Y291 106 aaKnown RBP20.28■□□□□ 0.84
SMARCD2-201ENST00000225742 NOX1Q9Y5S8 564 aa20.28■□□□□ 0.84
SMARCD2-201ENST00000225742 FAM25AB3EWG3 89 aa20.27■□□□□ 0.84
SMARCD2-201ENST00000225742 FAM25CB3EWG5 89 aa20.27■□□□□ 0.84
SMARCD2-201ENST00000225742 FAM25GB3EWG6 89 aa20.27■□□□□ 0.84
SMARCD2-201ENST00000225742 REM1O75628 298 aa20.27■□□□□ 0.84
SMARCD2-201ENST00000225742 IGLV3-19P01714 112 aa20.27■□□□□ 0.84
SMARCD2-201ENST00000225742 RNH1P13489 461 aaKnown RBP20.27■□□□□ 0.84
SMARCD2-201ENST00000225742 IGLV3-21P80748 117 aaPredicted RBP20.27■□□□□ 0.84
SMARCD2-201ENST00000225742 FGFBP1Q14512 234 aa20.27■□□□□ 0.84
SMARCD2-201ENST00000225742 ULK3Q6PHR2 472 aa20.27■□□□□ 0.84
SMARCD2-201ENST00000225742 PAMR1Q6UXH9 720 aa20.27■□□□□ 0.84
SMARCD2-201ENST00000225742 VASH1Q7L8A9 365 aaPredicted RBP20.27■□□□□ 0.84
SMARCD2-201ENST00000225742 GATAD2AQ86YP4 633 aa20.27■□□□□ 0.84
SMARCD2-201ENST00000225742 MS4A15Q8N5U1 240 aa20.27■□□□□ 0.84
SMARCD2-201ENST00000225742 OR5M3Q8NGP4 307 aa20.27■□□□□ 0.84
SMARCD2-201ENST00000225742 OR51A7Q8NH64 312 aa20.27■□□□□ 0.84
SMARCD2-201ENST00000225742 SMPDL3BQ92485 455 aa20.27■□□□□ 0.84
SMARCD2-201ENST00000225742 NECTIN4Q96NY8 510 aa20.27■□□□□ 0.84
SMARCD2-201ENST00000225742 TRAV27A0A087WT01 109 aa20.27■□□□□ 0.84
SMARCD2-201ENST00000225742 CTNSO60931 367 aa20.27■□□□□ 0.84
SMARCD2-201ENST00000225742 PPP1R3DO95685 299 aa20.27■□□□□ 0.84
SMARCD2-201ENST00000225742 IGHV4-34P06331 123 aa20.27■□□□□ 0.84
SMARCD2-201ENST00000225742 S100A1P23297 94 aa20.27■□□□□ 0.84
SMARCD2-201ENST00000225742 NUDT1P36639 197 aa20.27■□□□□ 0.84
SMARCD2-201ENST00000225742 INPP1P49441 399 aa20.27■□□□□ 0.84
SMARCD2-201ENST00000225742 EMDP50402 254 aa20.27■□□□□ 0.84
SMARCD2-201ENST00000225742 ZNF85Q03923 595 aa20.27■□□□□ 0.84
SMARCD2-201ENST00000225742 CRMP1Q14194 572 aa20.27■□□□□ 0.84
SMARCD2-201ENST00000225742 INSL4Q14641 139 aa20.27■□□□□ 0.84
SMARCD2-201ENST00000225742 P2RY14Q15391 338 aa20.27■□□□□ 0.84
SMARCD2-201ENST00000225742 PRTGQ2VWP7 1150 aa20.27■□□□□ 0.84
SMARCD2-201ENST00000225742 ALG10BQ5I7T1 473 aa20.27■□□□□ 0.84
SMARCD2-201ENST00000225742 DGAT2L6Q6ZPD8 337 aa20.27■□□□□ 0.84
SMARCD2-201ENST00000225742 TRILQ7L0X0 811 aa20.27■□□□□ 0.84
SMARCD2-201ENST00000225742 ZNF595Q8IYB9 648 aa20.27■□□□□ 0.84
SMARCD2-201ENST00000225742 ZNF578Q96N58 590 aaPredicted RBP20.27■□□□□ 0.84
SMARCD2-201ENST00000225742 TNFRSF13CQ96RJ3 184 aa20.27■□□□□ 0.84
SMARCD2-201ENST00000225742 TBX5Q99593 518 aa20.27■□□□□ 0.84
SMARCD2-201ENST00000225742 G6PC3Q9BUM1 346 aa20.27■□□□□ 0.84
SMARCD2-201ENST00000225742 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.27■□□□□ 0.84
SMARCD2-201ENST00000225742 TCEAL2Q9H3H9 227 aaPredicted RBP20.27■□□□□ 0.84
SMARCD2-201ENST00000225742 MCCC2Q9HCC0 563 aa20.27■□□□□ 0.84
SMARCD2-201ENST00000225742 GPR27Q9NS67 375 aa20.27■□□□□ 0.84
SMARCD2-201ENST00000225742 CYSLTR2Q9NS75 346 aa20.27■□□□□ 0.84
SMARCD2-201ENST00000225742 SCN2AQ99250 2005 aa20.27■□□□□ 0.83
SMARCD2-201ENST00000225742 SPTY2D1-AS1A0A0U1RR47 76 aa20.26■□□□□ 0.83
SMARCD2-201ENST00000225742 NPIPB9F8W1W9 429 aa20.26■□□□□ 0.83
SMARCD2-201ENST00000225742 LYRM1O43325 122 aa20.26■□□□□ 0.83
SMARCD2-201ENST00000225742 SRPX2O60687 465 aaPredicted RBP20.26■□□□□ 0.83
SMARCD2-201ENST00000225742 RFPL3O75679 317 aa20.26■□□□□ 0.83
SMARCD2-201ENST00000225742 RFX3P48380 749 aa20.26■□□□□ 0.83
SMARCD2-201ENST00000225742 GPR143P51810 404 aa20.26■□□□□ 0.83
SMARCD2-201ENST00000225742 NRG3P56975 720 aa20.26■□□□□ 0.83
SMARCD2-201ENST00000225742 TFF2Q03403 129 aa20.26■□□□□ 0.83
SMARCD2-201ENST00000225742 SF3B4Q15427 424 aaKnown RBP eCLIP20.26■□□□□ 0.837e-9■■■■■ 31.4
SMARCD2-201ENST00000225742 IDNKQ5T6J7 187 aa20.26■□□□□ 0.83
SMARCD2-201ENST00000225742 ARL9Q6T311 187 aa20.26■□□□□ 0.83
SMARCD2-201ENST00000225742 MCATQ8IVS2 390 aaKnown RBP20.26■□□□□ 0.83
SMARCD2-201ENST00000225742 SLC44A3Q8N4M1 653 aa20.26■□□□□ 0.83
SMARCD2-201ENST00000225742 OR9A4Q8NGU2 314 aa20.26■□□□□ 0.83
SMARCD2-201ENST00000225742 ABHD4Q8TB40 342 aa20.26■□□□□ 0.83
SMARCD2-201ENST00000225742 RIT1Q92963 219 aa20.26■□□□□ 0.83
SMARCD2-201ENST00000225742 ART5Q96L15 291 aa20.26■□□□□ 0.83
SMARCD2-201ENST00000225742 VSTM2LQ96N03 204 aa20.26■□□□□ 0.83
SMARCD2-201ENST00000225742 ERVMER34-1Q9H9K5 563 aa20.26■□□□□ 0.83
SMARCD2-201ENST00000225742 B3GAT2Q9NPZ5 323 aa20.26■□□□□ 0.83
SMARCD2-201ENST00000225742 STARD5Q9NSY2 213 aa20.26■□□□□ 0.83
SMARCD2-201ENST00000225742 RPS6KB2Q9UBS0 482 aa20.26■□□□□ 0.83
SMARCD2-201ENST00000225742 EFCAB7A8K855 629 aa20.25■□□□□ 0.83
SMARCD2-201ENST00000225742 PPM1BO75688 479 aa20.25■□□□□ 0.83
SMARCD2-201ENST00000225742 SERPINA3P01011 423 aa20.25■□□□□ 0.83
SMARCD2-201ENST00000225742 CHRNB1P11230 501 aa20.25■□□□□ 0.83
SMARCD2-201ENST00000225742 CTSEP14091 401 aa20.25■□□□□ 0.83
SMARCD2-201ENST00000225742 ST6GAL1P15907 406 aa20.25■□□□□ 0.83
SMARCD2-201ENST00000225742 ELK1P19419 428 aa20.25■□□□□ 0.83
SMARCD2-201ENST00000225742 NOS3P29474 1203 aa20.25■□□□□ 0.83
SMARCD2-201ENST00000225742 TALDO1P37837 337 aa20.25■□□□□ 0.83
SMARCD2-201ENST00000225742 SLC16A1P53985 500 aa20.25■□□□□ 0.83
SMARCD2-201ENST00000225742 HHEXQ03014 270 aa20.25■□□□□ 0.83
SMARCD2-201ENST00000225742 DLX2Q07687 328 aaPredicted RBP20.25■□□□□ 0.83
SMARCD2-201ENST00000225742 TMEM31Q5JXX7 168 aa20.25■□□□□ 0.83
SMARCD2-201ENST00000225742 HACD4Q5VWC8 232 aa20.25■□□□□ 0.83
SMARCD2-201ENST00000225742 PXKQ7Z7A4 578 aa20.25■□□□□ 0.83
SMARCD2-201ENST00000225742 C19orf47Q8N9M1 422 aaKnown RBP20.25■□□□□ 0.83
SMARCD2-201ENST00000225742 POMGNT2Q8NAT1 580 aa20.25■□□□□ 0.83
SMARCD2-201ENST00000225742 RBM18Q96H35 190 aaKnown RBP20.25■□□□□ 0.83
SMARCD2-201ENST00000225742 MKKSQ9NPJ1 570 aaPredicted RBP20.25■□□□□ 0.83
SMARCD2-201ENST00000225742 RBMX2Q9Y388 322 aaKnown RBP20.25■□□□□ 0.83
SMARCD2-201ENST00000225742 SC5DO75845 299 aa20.25■□□□□ 0.83
SMARCD2-201ENST00000225742 NDUFB2O95178 105 aa20.25■□□□□ 0.83
SMARCD2-201ENST00000225742 CSF2P04141 144 aa20.25■□□□□ 0.83
SMARCD2-201ENST00000225742 CD1AP06126 327 aa20.25■□□□□ 0.83
SMARCD2-201ENST00000225742 FAM157BP0CG42 384 aa20.25■□□□□ 0.83
SMARCD2-201ENST00000225742 IL9P15248 144 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms