RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 PSD4Q8NDX1 1056 aa8.77□□□□□ -1.01
CCDC113-201ENST00000219299 FCAMRQ8WWV6 532 aa8.77□□□□□ -1.01
CCDC113-201ENST00000219299 ZNF597Q96LX8 424 aa8.77□□□□□ -1.01
CCDC113-201ENST00000219299 GAL3ST1Q99999 423 aa8.77□□□□□ -1.01
CCDC113-201ENST00000219299 CXorf36Q9H7Y0 433 aa8.77□□□□□ -1.01
CCDC113-201ENST00000219299 B4GALT7Q9UBV7 327 aa8.77□□□□□ -1.01
CCDC113-201ENST00000219299 FBXO4Q9UKT5 387 aa8.77□□□□□ -1.01
CCDC113-201ENST00000219299 A0A1B0GTQ1 180 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 SEC14L5O43304 696 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 EEF1E1O43324 174 aaKnown RBP8.76□□□□□ -1.01
CCDC113-201ENST00000219299 PLATP00750 562 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 MAPK3P27361 379 aaPredicted RBP8.76□□□□□ -1.01
CCDC113-201ENST00000219299 HOXC5Q00444 222 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 CBFBQ13951 182 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 UBE2UQ5VVX9 321 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 LIPKQ5VXJ0 399 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 TMEM225Q6GV28 225 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 TSPYL5Q86VY4 417 aaPredicted RBP8.76□□□□□ -1.01
CCDC113-201ENST00000219299 HORMAD2Q8N7B1 307 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 ANKRD53Q8N9V6 530 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 WDR20Q8TBZ3 569 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 THRSPQ92748 146 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 FKBP10Q96AY3 582 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 NXPE2Q96DL1 559 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 AMDHD1Q96NU7 426 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 NRSN2Q9GZP1 204 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 ARL6Q9H0F7 186 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 TMEM181Q9P2C4 612 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 KCND3Q9UK17 655 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 RALGAPA2Q2PPJ7 1873 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 SMIM30A4D0T7 59 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 GALR3O60755 368 aaPredicted RBP8.76□□□□□ -1.01
CCDC113-201ENST00000219299 CTSVO60911 334 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 F10P00742 488 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 VAMP1P23763 118 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 PRKCDQ05655 676 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 PIN1Q13526 163 aaPredicted RBP8.76□□□□□ -1.01
CCDC113-201ENST00000219299 ELOAQ14241 798 aaKnown RBP8.76□□□□□ -1.01
CCDC113-201ENST00000219299 SPHARQ15513 63 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 TMED4Q7Z7H5 227 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 GATAD2BQ8WXI9 593 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 OR1F2PQ96R84 312 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 OR7D2Q96RA2 312 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 NXT1Q9UKK6 140 aaKnown RBP8.76□□□□□ -1.01
CCDC113-201ENST00000219299 VDAC3Q9Y277 283 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 C11orf98E9PRG8 122 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 MEN1O00255 615 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 PCDH17O14917 1159 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 TNFSF15O95150 251 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 AGTR1P30556 359 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 OR12D2P58182 307 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 SELPLGQ14242 412 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 NTRK2Q16620 822 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 ALG10BQ5I7T1 473 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 DESI1Q6ICB0 168 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 CPNE2Q96FN4 548 aaPredicted RBP8.76□□□□□ -1.01
CCDC113-201ENST00000219299 PRRX2Q99811 253 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 B3GNT4Q9C0J1 378 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 RNF121Q9H920 327 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 MGAT4CQ9UBM8 478 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 SLC22A7Q9Y694 548 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 CCDC163A0A0D9SF12 145 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 CSO75390 466 aaKnown RBP8.76□□□□□ -1.01
CCDC113-201ENST00000219299 NSA2O95478 260 aaKnown RBP8.76□□□□□ -1.01
CCDC113-201ENST00000219299 CSN2P05814 226 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 STSP08842 583 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 SLC35E2P0CK97 266 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 HSD17B7P56937 341 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 ARG2P78540 354 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 AIMP2Q13155 320 aaKnown RBP8.76□□□□□ -1.01
CCDC113-201ENST00000219299 ABCA11PQ4W5N1 156 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 DCST2Q5T1A1 773 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 TMEM121BQ9BXQ6 578 aaPredicted RBP8.76□□□□□ -1.01
CCDC113-201ENST00000219299 HOXD1Q9GZZ0 328 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 NDUFAF4Q9P032 175 aa8.76□□□□□ -1.01
CCDC113-201ENST00000219299 RPH3AQ9Y2J0 694 aaPredicted RBP8.76□□□□□ -1.01
CCDC113-201ENST00000219299 GKN3PP0CG01 181 aa8.75□□□□□ -1.01
CCDC113-201ENST00000219299 SNRPD2P62316 118 aaKnown RBP8.75□□□□□ -1.01
CCDC113-201ENST00000219299 VAMP2P63027 116 aa8.75□□□□□ -1.01
CCDC113-201ENST00000219299 BTG2P78543 158 aa8.75□□□□□ -1.01
CCDC113-201ENST00000219299 CRYZQ08257 329 aaKnown RBP8.75□□□□□ -1.01
CCDC113-201ENST00000219299 FAM198BQ6UWH4 519 aa8.75□□□□□ -1.01
CCDC113-201ENST00000219299 OR6N1Q8NGY5 312 aa8.75□□□□□ -1.01
CCDC113-201ENST00000219299 TFAP2CQ92754 450 aa8.75□□□□□ -1.01
CCDC113-201ENST00000219299 OSTF1Q92882 214 aa8.75□□□□□ -1.01
CCDC113-201ENST00000219299 PIP5K1AQ99755 562 aa8.75□□□□□ -1.01
CCDC113-201ENST00000219299 TREX2Q9BQ50 279 aaPredicted RBP8.75□□□□□ -1.01
CCDC113-201ENST00000219299 ZNF700Q9H0M5 742 aa8.75□□□□□ -1.01
CCDC113-201ENST00000219299 OR10A5Q9H207 317 aa8.75□□□□□ -1.01
CCDC113-201ENST00000219299 TMEM185BQ9H7F4 350 aa8.75□□□□□ -1.01
CCDC113-201ENST00000219299 DDX31Q9H8H2 851 aaKnown RBP8.75□□□□□ -1.01
CCDC113-201ENST00000219299 SEC61A2Q9H9S3 476 aa8.75□□□□□ -1.01
CCDC113-201ENST00000219299 PRDM9Q9NQV7 894 aa8.75□□□□□ -1.01
CCDC113-201ENST00000219299 ZNF225Q9UK10 706 aa8.75□□□□□ -1.01
CCDC113-201ENST00000219299 NPIPA5E9PKD4 350 aa8.75□□□□□ -1.01
CCDC113-201ENST00000219299 ALOX12BO75342 701 aa8.75□□□□□ -1.01
CCDC113-201ENST00000219299 CHMP24386 653 aa8.75□□□□□ -1.01
CCDC113-201ENST00000219299 DCKP27707 260 aa8.75□□□□□ -1.01
CCDC113-201ENST00000219299 KCNJ5P48544 419 aa8.75□□□□□ -1.01
CCDC113-201ENST00000219299 EPHA4P54764 986 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms