RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 POLE3Q9NRF9 147 aa14.09□□□□□ -0.15
ERCC1-201ENST00000013807 HAO1Q9UJM8 370 aa14.09□□□□□ -0.15
ERCC1-201ENST00000013807 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.09□□□□□ -0.15
ERCC1-201ENST00000013807 RNF115Q9Y4L5 304 aa14.09□□□□□ -0.15
ERCC1-201ENST00000013807 CFLARO15519 480 aa14.08□□□□□ -0.16
ERCC1-201ENST00000013807 ADAP00813 363 aa14.08□□□□□ -0.16
ERCC1-201ENST00000013807 FKBP2P26885 142 aaKnown RBP14.08□□□□□ -0.16
ERCC1-201ENST00000013807 IFFO1Q0D2I5 559 aa14.08□□□□□ -0.16
ERCC1-201ENST00000013807 PDK3Q15120 406 aa14.08□□□□□ -0.16
ERCC1-201ENST00000013807 ETFDHQ16134 617 aa14.08□□□□□ -0.16
ERCC1-201ENST00000013807 NDUFAF6Q330K2 333 aa14.08□□□□□ -0.16
ERCC1-201ENST00000013807 TIGD2Q4W5G0 525 aa14.08□□□□□ -0.16
ERCC1-201ENST00000013807 C3orf33Q6P1S2 294 aa14.08□□□□□ -0.16
ERCC1-201ENST00000013807 WDR93Q6P2C0 686 aa14.08□□□□□ -0.16
ERCC1-201ENST00000013807 NUDCD3Q8IVD9 361 aa14.08□□□□□ -0.16
ERCC1-201ENST00000013807 RAB3IL1Q8TBN0 382 aa14.08□□□□□ -0.16
ERCC1-201ENST00000013807 TMEM234Q8WY98 164 aa14.08□□□□□ -0.16
ERCC1-201ENST00000013807 AKAP1Q92667 903 aaKnown RBP eCLIP14.08□□□□□ -0.16
ERCC1-201ENST00000013807 POTEKPQ9BYX7 375 aa14.08□□□□□ -0.16
ERCC1-201ENST00000013807 ESRP2Q9H6T0 727 aaKnown RBP14.08□□□□□ -0.16
ERCC1-201ENST00000013807 SSU72Q9NP77 194 aaKnown RBP14.08□□□□□ -0.16
ERCC1-201ENST00000013807 ACER3Q9NUN7 267 aa14.08□□□□□ -0.16
ERCC1-201ENST00000013807 EXD2Q9NVH0 621 aa14.08□□□□□ -0.16
ERCC1-201ENST00000013807 IGKV3D-15A0A087WSY6 115 aa14.07□□□□□ -0.16
ERCC1-201ENST00000013807 GOLGA8QA0A0J9YX86 632 aa14.07□□□□□ -0.16
ERCC1-201ENST00000013807 PRSS51A0A1B0GVH4 220 aa14.07□□□□□ -0.16
ERCC1-201ENST00000013807 GOLGA8OA6NCC3 632 aa14.07□□□□□ -0.16
ERCC1-201ENST00000013807 GOLGA8NF8WBI6 632 aa14.07□□□□□ -0.16
ERCC1-201ENST00000013807 ANKRD28O15084 1053 aa14.07□□□□□ -0.16
ERCC1-201ENST00000013807 SMAD9O15198 467 aaKnown RBP14.07□□□□□ -0.16
ERCC1-201ENST00000013807 BIRC5O15392 142 aa14.07□□□□□ -0.16
ERCC1-201ENST00000013807 PGM3O95394 542 aa14.07□□□□□ -0.16
ERCC1-201ENST00000013807 AGR2O95994 175 aa14.07□□□□□ -0.16
ERCC1-201ENST00000013807 SLC7A1P30825 629 aa14.07□□□□□ -0.16
ERCC1-201ENST00000013807 PGM1P36871 562 aa14.07□□□□□ -0.16
ERCC1-201ENST00000013807 SESN3P58005 492 aa14.07□□□□□ -0.16
ERCC1-201ENST00000013807 PHC1P78364 1004 aa14.07□□□□□ -0.16
ERCC1-201ENST00000013807 OR4F3Q6IEY1 312 aa14.07□□□□□ -0.16
ERCC1-201ENST00000013807 TMPPEQ6ZT21 453 aa14.07□□□□□ -0.16
ERCC1-201ENST00000013807 P2RY8Q86VZ1 359 aa14.07□□□□□ -0.16
ERCC1-201ENST00000013807 CLECL1Q8IZS7 167 aa14.07□□□□□ -0.16
ERCC1-201ENST00000013807 MREGQ8N565 214 aa14.07□□□□□ -0.16
ERCC1-201ENST00000013807 SLC25A43Q8WUT9 341 aaPredicted RBP14.07□□□□□ -0.16
ERCC1-201ENST00000013807 KISS1RQ969F8 398 aaPredicted RBP14.07□□□□□ -0.16
ERCC1-201ENST00000013807 TESCQ96BS2 214 aa14.07□□□□□ -0.16
ERCC1-201ENST00000013807 TRIM44Q96DX7 344 aaPredicted RBP14.07□□□□□ -0.16
ERCC1-201ENST00000013807 THUMPD3Q9BV44 507 aaKnown RBP14.07□□□□□ -0.16
ERCC1-201ENST00000013807 AKTIPQ9H8T0 292 aa14.07□□□□□ -0.16
ERCC1-201ENST00000013807 A0A1W2PNR3 127 aa14.06□□□□□ -0.16
ERCC1-201ENST00000013807 ITM2AO43736 263 aa14.06□□□□□ -0.16
ERCC1-201ENST00000013807 KIAA0513O60268 411 aa14.06□□□□□ -0.16
ERCC1-201ENST00000013807 H6PDO95479 791 aa14.06□□□□□ -0.16
ERCC1-201ENST00000013807 SERPINE1P05121 402 aa14.06□□□□□ -0.16
ERCC1-201ENST00000013807 CD3EP07766 207 aa14.06□□□□□ -0.16
ERCC1-201ENST00000013807 DHRS4L1P0CG22 281 aa14.06□□□□□ -0.16
ERCC1-201ENST00000013807 PGCP20142 388 aa14.06□□□□□ -0.16
ERCC1-201ENST00000013807 COX5AP20674 150 aa14.06□□□□□ -0.16
ERCC1-201ENST00000013807 UQCRC2P22695 453 aa14.06□□□□□ -0.16
ERCC1-201ENST00000013807 IL32P24001 234 aa14.06□□□□□ -0.16
ERCC1-201ENST00000013807 APOBEC1P41238 236 aaKnown RBP14.06□□□□□ -0.16
ERCC1-201ENST00000013807 ATP5J2P56134 94 aa14.06□□□□□ -0.16
ERCC1-201ENST00000013807 RPS4XP62701 263 aaKnown RBP14.06□□□□□ -0.16
ERCC1-201ENST00000013807 RPS26P62854 115 aaKnown RBP14.06□□□□□ -0.16
ERCC1-201ENST00000013807 RASGEF1BQ0VAM2 473 aa14.06□□□□□ -0.16
ERCC1-201ENST00000013807 GPR68Q15743 365 aa14.06□□□□□ -0.16
ERCC1-201ENST00000013807 MAPK14Q16539 360 aa14.06□□□□□ -0.16
ERCC1-201ENST00000013807 PGS1Q32NB8 556 aa14.06□□□□□ -0.16
ERCC1-201ENST00000013807 ZNF672Q499Z4 452 aaPredicted RBP14.06□□□□□ -0.16
ERCC1-201ENST00000013807 EIF3MQ7L2H7 374 aaKnown RBP14.06□□□□□ -0.16
ERCC1-201ENST00000013807 MTDHQ86UE4 582 aaKnown RBP14.06□□□□□ -0.16
ERCC1-201ENST00000013807 KIRREL3Q8IZU9 778 aa14.06□□□□□ -0.16
ERCC1-201ENST00000013807 ZNF614Q8N883 585 aa14.06□□□□□ -0.16
ERCC1-201ENST00000013807 ZNF781Q8N8C0 355 aa14.06□□□□□ -0.16
ERCC1-201ENST00000013807 FBXW5Q969U6 566 aa14.06□□□□□ -0.16
ERCC1-201ENST00000013807 SLC35G5Q96KT7 338 aa14.06□□□□□ -0.16
ERCC1-201ENST00000013807 TRIM2Q9C040 744 aa14.06□□□□□ -0.16
ERCC1-201ENST00000013807 C20orf27Q9GZN8 174 aa14.06□□□□□ -0.16
ERCC1-201ENST00000013807 SERINC1Q9NRX5 453 aa14.06□□□□□ -0.16
ERCC1-201ENST00000013807 MKLN1Q9UL63 735 aa14.06□□□□□ -0.16
ERCC1-201ENST00000013807 PCDHGB4Q9UN71 923 aa14.06□□□□□ -0.16
ERCC1-201ENST00000013807 LAMP3Q9UQV4 416 aa14.06□□□□□ -0.16
ERCC1-201ENST00000013807 SLC35A3Q9Y2D2 325 aa14.06□□□□□ -0.16
ERCC1-201ENST00000013807 RAP2CQ9Y3L5 183 aa14.06□□□□□ -0.16
ERCC1-201ENST00000013807 CENPVL1A0A0U1RR11 272 aa14.05□□□□□ -0.16
ERCC1-201ENST00000013807 RNF103-CHMP3A0A140T963 221 aa14.05□□□□□ -0.16
ERCC1-201ENST00000013807 DPRXA6NFQ7 191 aa14.05□□□□□ -0.16
ERCC1-201ENST00000013807 DNPH1O43598 174 aa14.05□□□□□ -0.16
ERCC1-201ENST00000013807 CSTAP01040 98 aa14.05□□□□□ -0.16
ERCC1-201ENST00000013807 SOD3P08294 240 aa14.05□□□□□ -0.16
ERCC1-201ENST00000013807 MYZAPP0CAP1 466 aa14.05□□□□□ -0.16
ERCC1-201ENST00000013807 CLK1P49759 484 aaKnown RBP14.05□□□□□ -0.16
ERCC1-201ENST00000013807 DIO1P49895 249 aa14.05□□□□□ -0.16
ERCC1-201ENST00000013807 RNF144AP50876 292 aaPredicted RBP14.05□□□□□ -0.16
ERCC1-201ENST00000013807 RPL14P50914 215 aaKnown RBP14.05□□□□□ -0.16
ERCC1-201ENST00000013807 ABCE1P61221 599 aaKnown RBP14.05□□□□□ -0.16
ERCC1-201ENST00000013807 CSNK2A1P68400 391 aaPredicted RBP14.05□□□□□ -0.16
ERCC1-201ENST00000013807 CASP8Q14790 479 aa14.05□□□□□ -0.16
ERCC1-201ENST00000013807 TSC22D1Q15714 1073 aa14.05□□□□□ -0.16
ERCC1-201ENST00000013807 DPY19L1Q2PZI1 675 aa14.05□□□□□ -0.16
ERCC1-201ENST00000013807 SYT14P1Q58G82 188 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms