RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 COMMD7Q86VX2 200 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 FOXRED2Q8IWF2 684 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 MUS81Q96NY9 551 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 USB1Q9BQ65 265 aaKnown RBP5.73□□□□□ -1.49
VPS13D-201ENST00000011700 RPS10P5Q9NQ39 176 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 ACTR10Q9NZ32 417 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 BOKQ9UMX3 212 aaPredicted RBP5.73□□□□□ -1.49
VPS13D-201ENST00000011700 CLDN5O00501 218 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 RPP14O95059 124 aaKnown RBP5.73□□□□□ -1.49
VPS13D-201ENST00000011700 FBP1P09467 338 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 M6PRP20645 277 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 HLA-FP30511 346 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 GP2P55259 537 aaKnown RBP5.73□□□□□ -1.49
VPS13D-201ENST00000011700 AMZ1Q400G9 498 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 ATPAF1Q5TC12 328 aaPredicted RBP5.73□□□□□ -1.49
VPS13D-201ENST00000011700 OR4C11Q6IEV9 310 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 ZNF585AQ6P3V2 769 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 C6orf89Q6UWU4 347 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 ADGRA1Q86SQ6 560 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 OIT3Q8WWZ8 545 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 KLRG1Q96E93 195 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 ZNF681Q96N22 645 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 NDFIP1Q9BT67 221 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 AIG1Q9NVV5 245 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 EXO1Q9UQ84 846 aaKnown RBP5.73□□□□□ -1.49
VPS13D-201ENST00000011700 FAM96BQ9Y3D0 163 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 GRXCR1A8MXD5 290 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 TPPPO94811 219 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 CHRM2P08172 466 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 GALP22466 123 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 TAS2R45P59539 299 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 HNF4GQ14541 408 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 TIGITQ495A1 244 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 C22orf42Q6IC83 251 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 FAM122BQ7Z309 247 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 LSMEM2Q8N112 164 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 SLC6A18Q96N87 628 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 UHRF1Q96T88 793 aaPredicted RBP5.73□□□□□ -1.49
VPS13D-201ENST00000011700 PKP2Q99959 881 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 CPEB1Q9BZB8 566 aaKnown RBP5.73□□□□□ -1.49
VPS13D-201ENST00000011700 hCG_1807616A0A1W2PRN6 198 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 MTMR11A4FU01 709 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 OR2F2O95006 317 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 YIF1AO95070 293 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 SPI1P17947 270 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 ABCG1P45844 678 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 UBE2MP61081 183 aaKnown RBP5.73□□□□□ -1.49
VPS13D-201ENST00000011700 OR2F1Q13607 317 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 COX19Q49B96 90 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 AGBL4Q5VU57 503 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 FBXL22Q6P050 247 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 TRAPPC6BQ86SZ2 158 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 TAC4Q86UU9 113 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 SUMF1Q8NBK3 374 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 OR4N2Q8NGD1 307 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 OR52H1Q8NGJ2 320 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 OR14A16Q8NHC5 309 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 NDNFQ8TB73 568 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 ABHD5Q8WTS1 349 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 FRZBQ92765 325 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 KIRREL1Q96J84 757 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 ZDHHC5Q9C0B5 715 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 TAC3Q9UHF0 121 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 POU2F3Q9UKI9 436 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 UBE2Q2LH0YL09 131 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 WNT7AO00755 349 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 KNG1P01042 644 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 LCKP06239 509 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 ADORA3P0DMS8 318 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 CT45A10P0DMU9 189 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 NUMBP49757 651 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 NOVA1P51513 510 aaKnown RBP5.73□□□□□ -1.49
VPS13D-201ENST00000011700 SLC10A6Q3KNW5 377 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 RNF212Q495C1 297 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 SPANXN4Q5MJ08 99 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 FRMPD2BQ6IN97 320 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 ZNF595Q8IYB9 648 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 SLC5A8Q8N695 610 aa5.73□□□□□ -1.49
VPS13D-201ENST00000011700 LTBP3Q9NS15 1303 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 YJEFN3A6XGL0 299 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 PPP5D1E7EU14 171 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 RRP8O43159 456 aaKnown RBP5.72□□□□□ -1.49
VPS13D-201ENST00000011700 SOD2P04179 222 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 GLAP06280 429 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 JMJD7P0C870 316 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 DRD1P21728 446 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 SEC61A1P61619 476 aaKnown RBP5.72□□□□□ -1.49
VPS13D-201ENST00000011700 GRB2P62993 217 aaKnown RBP5.72□□□□□ -1.49
VPS13D-201ENST00000011700 CLDN10P78369 228 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 TATDN3Q17R31 274 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 IRF2BP1Q8IU81 584 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 CMTM2Q8TAZ6 248 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 SLC27A5Q9Y2P5 690 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 A8MX80 341 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 ARNTLO00327 626 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 SYT5O00445 386 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 GPR171O14626 319 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 ABCD4O14678 606 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 GALR3O60755 368 aaPredicted RBP5.72□□□□□ -1.49
VPS13D-201ENST00000011700 POP7O75817 140 aaKnown RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms