RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Sgpp2Q810K3 354 aa12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 Banf2Q8BVR0 90 aa12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 EfhbQ8CDU5 853 aa12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 Casc3Q8K3W3 698 aaKnown RBP12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 V1ra11Q8R2E6 318 aa12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 LgalslQ8VED9 172 aa12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 Olfr1491Q8VEZ5 319 aa12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 Olfr808Q8VGI8 312 aa12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 Vmn1r45Q8VIC7 318 aa12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 Tm4sf4Q91XD3 202 aa12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 Mfsd2aQ9DA75 534 aa12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 Tprg1lQ9DBS2 266 aa12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 Pop7Q9DCH2 140 aa12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 Bco1Q9JJS6 566 aa12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 Fbxw5Q9QXW2 573 aa12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 Decr2Q9WV68 292 aa12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 KcpQ3U492 1550 aa12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 Gm595A2AF73 655 aa12.52□□□□□ -0.4
Nup88-201ENSMUST00000035283 Vmn2r108E9PYS0 855 aa12.52□□□□□ -0.4
Nup88-201ENSMUST00000035283 Vmn2r52L7N2B2 852 aa12.52□□□□□ -0.4
Nup88-201ENSMUST00000035283 Angpt1O08538 498 aa12.52□□□□□ -0.4
Nup88-201ENSMUST00000035283 EllO08856 602 aa12.52□□□□□ -0.4
Nup88-201ENSMUST00000035283 Timp2P25785 220 aa12.52□□□□□ -0.4
Nup88-201ENSMUST00000035283 Guca1aP43081 202 aa12.52□□□□□ -0.4
Nup88-201ENSMUST00000035283 PtgirP43252 415 aa12.52□□□□□ -0.4
Nup88-201ENSMUST00000035283 Rfx3P48381 749 aa12.52□□□□□ -0.4
Nup88-201ENSMUST00000035283 Eri2Q5BKS4 688 aa12.52□□□□□ -0.4
Nup88-201ENSMUST00000035283 ThrspQ62264 150 aa12.52□□□□□ -0.4
Nup88-201ENSMUST00000035283 Nup62Q63850 526 aa12.52□□□□□ -0.4
Nup88-201ENSMUST00000035283 BpiQ67E05 483 aa12.52□□□□□ -0.4
Nup88-201ENSMUST00000035283 Ranbp3lQ6PDH4 491 aa12.52□□□□□ -0.4
Nup88-201ENSMUST00000035283 DgkzQ80UP3 929 aa12.52□□□□□ -0.4
Nup88-201ENSMUST00000035283 Mmp28Q8CGV8 520 aa12.52□□□□□ -0.4
Nup88-201ENSMUST00000035283 Dnajc22Q8CHS2 339 aa12.52□□□□□ -0.4
Nup88-201ENSMUST00000035283 Flywch1Q8CI03 673 aa12.52□□□□□ -0.4
Nup88-201ENSMUST00000035283 Mchr1Q8JZL2 353 aa12.52□□□□□ -0.4
Nup88-201ENSMUST00000035283 Tor2aQ8R1J9 321 aa12.52□□□□□ -0.4
Nup88-201ENSMUST00000035283 Olfr98Q8VFD9 309 aa12.52□□□□□ -0.4
Nup88-201ENSMUST00000035283 Olfr99Q8VFE4 305 aa12.52□□□□□ -0.4
Nup88-201ENSMUST00000035283 Olfr686Q8VGX3 317 aa12.52□□□□□ -0.4
Nup88-201ENSMUST00000035283 Rab28Q99KL7 221 aa12.52□□□□□ -0.4
Nup88-201ENSMUST00000035283 Msantd3Q9CR78 275 aa12.52□□□□□ -0.4
Nup88-201ENSMUST00000035283 Sgk3Q9ERE3 496 aa12.52□□□□□ -0.4
Nup88-201ENSMUST00000035283 Pkmyt1Q9ESG9 490 aa12.52□□□□□ -0.4
Nup88-201ENSMUST00000035283 Pmm2Q9Z2M7 242 aa12.52□□□□□ -0.4
Nup88-201ENSMUST00000035283 Golga4Q91VW5 2238 aa12.52□□□□□ -0.41
Nup88-201ENSMUST00000035283 Zfp735B1ARH2 734 aa12.52□□□□□ -0.41
Nup88-201ENSMUST00000035283 BckdkO55028 412 aa12.52□□□□□ -0.41
Nup88-201ENSMUST00000035283 Ltb4rO88855 351 aa12.52□□□□□ -0.41
Nup88-201ENSMUST00000035283 Fabp1P12710 127 aa12.52□□□□□ -0.41
Nup88-201ENSMUST00000035283 Nkx2-6P43688 289 aa12.52□□□□□ -0.41
Nup88-201ENSMUST00000035283 Slc9a3r1P70441 355 aa12.52□□□□□ -0.41
Nup88-201ENSMUST00000035283 St3gal3P97325 374 aa12.52□□□□□ -0.41
Nup88-201ENSMUST00000035283 Cep76Q0VEJ0 659 aa12.52□□□□□ -0.41
Nup88-201ENSMUST00000035283 Tmem248Q3TBN1 314 aa12.52□□□□□ -0.41
Nup88-201ENSMUST00000035283 Vwa5b2Q3UR50 1248 aa12.52□□□□□ -0.41
Nup88-201ENSMUST00000035283 Gpr119Q7TQP3 335 aa12.52□□□□□ -0.41
Nup88-201ENSMUST00000035283 Fbxo5Q7TSG3 421 aa12.52□□□□□ -0.41
Nup88-201ENSMUST00000035283 Fbxl21Q8BFZ4 434 aa12.52□□□□□ -0.41
Nup88-201ENSMUST00000035283 Luzp2Q8BGY3 345 aa12.52□□□□□ -0.41
Nup88-201ENSMUST00000035283 Zbtb46Q8BID6 600 aa12.52□□□□□ -0.41
Nup88-201ENSMUST00000035283 Lkaaear1Q8BIG2 198 aa12.52□□□□□ -0.41
Nup88-201ENSMUST00000035283 Slc35c1Q8BLX4 363 aa12.52□□□□□ -0.41
Nup88-201ENSMUST00000035283 Eri3Q8C460 337 aa12.52□□□□□ -0.41
Nup88-201ENSMUST00000035283 Cables2Q8K3M5 476 aa12.52□□□□□ -0.41
Nup88-201ENSMUST00000035283 Ttc36Q8VBW8 186 aa12.52□□□□□ -0.41
Nup88-201ENSMUST00000035283 Olfr474Q8VFC9 310 aa12.52□□□□□ -0.41
Nup88-201ENSMUST00000035283 Olfr935Q8VG16 308 aa12.52□□□□□ -0.41
Nup88-201ENSMUST00000035283 Olfr683Q8VGV1 319 aa12.52□□□□□ -0.41
Nup88-201ENSMUST00000035283 Asb8Q91ZT9 288 aa12.52□□□□□ -0.41
Nup88-201ENSMUST00000035283 Cmtm3Q99LJ5 184 aa12.52□□□□□ -0.41
Nup88-201ENSMUST00000035283 Slc26a5Q99NH7 744 aa12.52□□□□□ -0.41
Nup88-201ENSMUST00000035283 Trappc2Q9CQP2 140 aa12.52□□□□□ -0.41
Nup88-201ENSMUST00000035283 Cst11Q9D269 139 aa12.52□□□□□ -0.41
Nup88-201ENSMUST00000035283 Ephx1Q9D379 455 aa12.52□□□□□ -0.41
Nup88-201ENSMUST00000035283 Ttc9bQ9D6E4 239 aa12.52□□□□□ -0.41
Nup88-201ENSMUST00000035283 Mcemp1Q9D8U6 183 aa12.52□□□□□ -0.41
Nup88-201ENSMUST00000035283 Stra6lQ9DBN1 621 aa12.52□□□□□ -0.41
Nup88-201ENSMUST00000035283 Arfgap1Q9EPJ9 414 aa12.52□□□□□ -0.41
Nup88-201ENSMUST00000035283 Nox4Q9JHI8 578 aa12.52□□□□□ -0.41
Nup88-201ENSMUST00000035283 Aldh9a1Q9JLJ2 494 aa12.52□□□□□ -0.41
Nup88-201ENSMUST00000035283 Ckap5A2AGT5 2032 aaKnown RBP12.52□□□□□ -0.41
Nup88-201ENSMUST00000035283 Heatr5bQ8C547 2070 aa12.52□□□□□ -0.41
Nup88-201ENSMUST00000035283 Olfr1555-ps1A0A140LHT7 321 aa12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 Zfp978A2A7I1 335 aa12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 Zyg11aA2BFL2 627 aa12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 LipiF6YQT7 476 aa12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 Olfr294F7CWV4 335 aa12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 H2-ObO35424 271 aa12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 Fzd3Q61086 666 aa12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 Methig1Q76I26 264 aa12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 Fjx1Q8BQB4 450 aa12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 Slc5a8Q8BYF6 611 aa12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 Wdr26Q8C6G8 641 aa12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 Olfr63Q8VBW9 316 aa12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 Med9Q8VCS6 142 aa12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 Sgip1Q8VD37 806 aa12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 Olfr109Q8VG96 314 aa12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 Satb2Q8VI24 733 aa12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 Egln3Q91UZ4 239 aa12.51□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 77.5 ms